Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq207439 167 7e-37 seq185731 122 3e-23 seq101952 118 3e-22 seq238992 102 3e-17 seq111113 100 9e-17 seq252665 98.7 3e-16 >seq207439 Length=1826 Score = 167 bits (184), Expect = 7e-37 Identities = 263/374 (70%), Gaps = 12/374 (3%) Strand=Plus/Plus Query 21158 CGGGCCCTGGCCCGGCGTCACAAGCAGCGCCATGGGTTGAGCCTGCTGGTGGTGGACTAC 21217 |||||| ||| ||||| | ||||||||| || | ||| ||| | || ||||||||| Sbjct 1449 CGGGCCAAGGCGCGGCGGCTCAAGCAGCGGCACGACCTGAAGCTGATCGTCGTGGACTAC 1508 Query 21218 CTGCAGCTGCTGGAGAGCTCCGGCAAG----TCCACTCGCACCG--AGGACGTCAGCGAC 21271 ||||||||| || | ||||||||| | | || | || |||| ||| || Sbjct 1509 CTGCAGCTGATGACG---TCCGGCAAGAAGGTGGAGTCCCGCCAGCAGGAGGTCTCGGAG 1565 Query 21272 ATGTCCCGCCAGTGCAAGCTGCTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCG 21331 | ||||| ||| ||| |||| || | |||||| | | || ||| | | ||| || Sbjct 1566 TTCTCCCGGCAGATGAAGTTGCTCGCCAAGGAGCTCGAGCTGCCGGTGGTGGCGCTCTCC 1625 Query 21332 CAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACCGATGATGTCGGACCTGCGC 21391 ||||| ||||| | |||||||||| | ||||||| |||||| ||||||||||||| Sbjct 1626 CAGCTGAACCGTGGCGCGGAGCAGCGGACCGACAAGCGGCCGATGCTGTCGGACCTGCGT 1685 Query 21392 GAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTCGTGTACCGCGACGAGGTC 21451 ||||| || || ||||||||||||| || || |||| |||| |||| ||| | | Sbjct 1686 GAGTCGGGTTCGCTCGAGCAGGACGCGGACGTCGTCATCCTCGTCCACCGGCCCGATGCC 1745 Query 21452 TACCACCCGGATACCCAGTACCGCGGCGTGGCTGAGTTGATCATCGCGAAGCACCGCAAC 21511 ||| || | || || || ||||| ||| || |||| | | |||||||||||| Sbjct 1746 TACGACTCCGAGGACC---GCCCCGGCGAGGCCGACCTGATGGTGGTCAAGCACCGCAAC 1802 Query 21512 GGCGAGCCAAGCAC 21525 |||||| | |||| Sbjct 1803 GGCGAGACCCGCAC 1816 >seq185731 Length=264 Score = 122 bits (134), Expect = 3e-23 Identities = 177/246 (72%), Gaps = 8/246 (3%) Strand=Plus/Plus Query 21273 TGTCCCGCCAGTGCAAGCTGCTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCGC 21332 |||| | ||| |||||| || |||| |||||| | | || ||| | | | || | Sbjct 9 TGTCAAGGCAGATCAAGCTTCTCGCGAAGGAGCTCGAGGTTCCGGTGGTGGCGATGAGCC 68 Query 21333 AGCTCAACCGC--TCCCTGGAGCAGCGGCCGAACAAGCGACCGATGATGTCGGACCTGCG 21390 |||| ||||| |||| |||||||| | ||||| |||||| |||| |||||||| Sbjct 69 AGCTGAACCGTGGTCCC--GAGCAGCGCACCGACAAGAAGCCGATGCTGTCCGACCTGCG 126 Query 21391 CGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTCGTGTACCGCGACGAGGT 21450 |||||||| |||||||||||||| |||| || | | |||| ||||| ||| | Sbjct 127 TGAGTCCGGCTCGATCGAGCAGGACTCCGACGTCGTGCTCCTCGTCCACCGCCCCGATCT 186 Query 21451 CTACCACCCGGATACCCA--GTACCGCGGCGTGGCTGAGTTGATCATCGCGAAGCACCGC 21508 |||| | || || ||| | || | ||||| ||| || |||||||||| |||||||| Sbjct 187 CTACGAGCCCGAGACCGAACGTGC--CGGCGAGGCCGACCTGATCATCGCCAAGCACCGT 244 Query 21509 AACGGC 21514 |||||| Sbjct 245 AACGGC 250 >seq101952 Length=1540 Score = 118 bits (130), Expect = 3e-22 Identities = 132/174 (76%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 21275 TCCCGCCAGTGCAAGCTGCTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCGCAG 21334 ||||| ||| |||||||||||| | |||||| | ||||| | ||| ||| || ||| Sbjct 865 TCCCGGCAGATCAAGCTGCTGGCCAAGGAGCTCGAGATCCCGATCGTCGCGCTCTCCCAG 806 Query 21335 CTCAACCGCTCCCTGGAGCAGCG-GCCGAACAAGCGACCGATGATGTCGGACCTGCGCGA 21393 |||||||| || ||| || ||||| |||||| || |||||| | ||||||||||| Sbjct 805 CTCAACCGTGGCCCCGAGACCCGCGCCGA-CAAGCGCCCCATGATGGCCGACCTGCGCGA 747 Query 21394 GTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTCGTGTACCGCGACGA 21447 |||||| || | |||||||||||||| | ||||| | || ||||||| || Sbjct 746 GTCCGGCTCGCTGGAGCAGGACGCCGACATCATCATCCTGCTGCACCGCGAGGA 693 >seq238992 Length=528 Score = 102 bits (112), Expect = 3e-17 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 21317 GTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACCGATG 21376 ||||| | | || ||||||||| |||| | | ||| |||| ||| ||||||| || ||| Sbjct 249 GTGATGGCGGTGGCGCAGCTCAGCCGCGACGTTGAGAAGCGTCCGGACAAGCGGCCCATG 190 Query 21377 ATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTCGTG 21436 || ||||| || || ||| |||||||||||||||||| |||||| | ||||| Sbjct 189 CCATCCGACCTCCGTGACAGCGGCCAGATCGAGCAGGACGCCGACGTGATCCTCTTCGTC 130 Query 21437 TACCGCGACGAGGTCTACC 21455 |||||||| |||| |||| Sbjct 129 TACCGCGAGGAGGAATACC 111 >seq111113 Length=4129 Score = 100 bits (110), Expect = 9e-17 Identities = 246/368 (67%), Gaps = 19/368 (5%) Strand=Plus/Plus Query 21158 CGGGCCCTGGCCCGGCGTCACAAGCAGCGCCATGGGTTGAGCCTGCTGGTGGTGGACTAC 21217 || ||| |||||| || | ||||||||| || | | | ||| |||| | |||||| Sbjct 3661 CGCGCCAAGGCCCGTCGCCTCAAGCAGCGTCACGATCTACGGCTGGTGGTCATCGACTAC 3720 Query 21218 CTGCAGCTGCTGGAGAGCTCCGGCAAG----TCCACTCGCACCG--AGGACGTCAGCGAC 21271 |||||||| || | || |||||| || | |||| || |||| ||| || Sbjct 3721 ATGCAGCTGATGACG---TCGGGCAAGAAGGTCGAGTCGCGCCAGCAGGAGGTCTCGGAG 3777 Query 21272 ATGTCCCGCCAGTGCAAGCTGCTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCG 21331 | ||||| ||| ||||||| |||| | |||||| | | || ||| ||| | Sbjct 3778 TTCTCCCGTCAGCTCAAGCTGTTGGCCAAGGAGCTCGAGGTGCCGGTGGTCGCCATCAGC 3837 Query 21332 CAGCTCAACC--GCTCCCTGGAGCAGCGGCCGAACAAGCGACCGATGATGTCGGACCTGC 21389 |||||||||| | |||| |||||||| | |||||||||| | ||||||| || | Sbjct 3838 CAGCTCAACCGTGGTCCC--GAGCAGCGCACCGACAAGCGACCCCAGGTGTCGGATCTCC 3895 Query 21390 GCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTCGTGTACCG---CGACG 21446 | ||||| || || | ||||||||||| || || | || | || |||| |||| Sbjct 3896 GTGAGTCGGGTTCGCTGGAGCAGGACGCGGACATGGTGATCCTGCTGCACCGCCCCGACT 3955 Query 21447 AGGTCTACCACCCGGATACCCAGTACCGCGGCGTGGCTGAGTTGATCATCGCGAAGCACC 21506 || | | | ||| ||| | ||||| ||| || | ||| ||| ||||||| Sbjct 3956 CCATCGAGCGCGACGATCCCC---GCGCCGGCGAGGCCGACATCATCCTCGGCAAGCACC 4012 Query 21507 GCAACGGC 21514 |||||||| Sbjct 4013 GCAACGGC 4020 >seq252665 Length=347 Score = 98.7 bits (108), Expect = 3e-16 Identities = 111/146 (76%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 21311 ATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGA-ACAAGCG 21369 |||||||| ||| ||| |||||| |||| || | || ||| || | |||| || Sbjct 54 ATCCCCGTCCTCGCACTGAGCCAGCTCTCCCGCGCCGTCGAA-AGCCGCGAAGACAAACG 112 Query 21370 ACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCAT 21429 |||||| |||||||||||||||| ||||| ||||||| ||||| ||||| | | | || Sbjct 113 TCCGATGCTGTCGGACCTGCGCGAATCCGGCTCGATCGAACAGGATGCCGACGCGGTGAT 172 Query 21430 GTTCGTGTACCGCGACGAGGTCTACC 21455 ||| || ||||||||||| ||||| Sbjct 173 GTTTGTCTACCGCGACGATTACTACC 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156593450126062