Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_016765.1
Length=54024
Score E
Sequences producing significant alignments: (Bits) Value
seq276787 140 1e-28
seq101952 104 8e-18
>seq276787
Length=256
Score = 140 bits (154), Expect = 1e-28
Identities = 181/250 (72%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 5290 CTGGCCGAGTTCCCGGCCAGCGGTATCGTGCTCAACCCCATCGACTGGGCGCTGATCGAG 5349
||||| |||| |||||| | ||||||| ||||| |||||||||||| ||||||
Sbjct 5 CTGGCGGAGTATCCGGCCTCGGCCTTCGTGCTGAACCCGATCGACTGGGCGACGATCGAA 64
Query 5350 CTGACCAAGGACGCCGAGAACCGTTACATCATCGGCAGCCCGCAGAACGGCACCACTCCG 5409
|| || |||||| || || ||| |||||||||||| |||| | ||| |||
Sbjct 65 CTCACGAAGGACACCCAGGGCCGCTACATCATCGGCGACCCGGCCGAGGGCGTGCAGCCG 124
Query 5410 ACCCTCTGGCGTCTGCCGGTGGTGGAAACCCAGGCCATCACTCAGGACGAGTTCCTGACC 5469
|| ||| ||||||||||| | |||||||| | ||| || |||||| |||
Sbjct 125 CGGCTGTGGAACCTGCCGGTGGTCGCGACCCAGGCGCAGGCGCAGAACCGGTTCCTCACC 184
Query 5470 GGTGCGTTCTCTCTCGGCGCCCAGATCTTCGACCGCATGGACATCGAGGTTCTGGTTTCC 5529
|| || ||| | ||| || ||||||||||| |||||||| |||||||| || | ||
Sbjct 185 GGAGCCTTCGATATCGCGGCGCAGATCTTCGATCGCATGGAGATCGAGGTGTTGCTGTCG 244
Query 5530 ACCGAGAACG 5539
||||||||||
Sbjct 245 ACCGAGAACG 254
>seq101952
Length=1540
Score = 104 bits (114), Expect = 8e-18
Identities = 129/174 (74%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 45488 TCGCGTCAGATGAAGCTGTTGGCAAGGGAGATTGGGTGTCCTGTGCTTCCC-CTCTGCCA 45546
|| || ||||| |||||| |||| | |||| | | | ||| | | || | |||| |||
Sbjct 865 TCCCGGCAGATCAAGCTGCTGGCCAAGGAGCTCGAGA-TCCCGATCGTCGCGCTCTCCCA 807
Query 45547 GCTCAACCGAGGTTGCGAGTCTCGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGCGCGA 45606
||||||||| || |||| | ||| |||||||||| || | | ||||||||||||
Sbjct 806 GCTCAACCGTGGCCCCGAGACCCGCGCCGACAAGCGCCCCATGATGGCCGACCTGCGCGA 747
Query 45607 GTCCGGCGCCATTGAGCAAGACGCCGACATCGTCATGTTCGTGTACCGCGATGA 45660
||||||| | | ||||| |||||||||||| |||| | || ||||||| ||
Sbjct 746 GTCCGGCTCGCTGGAGCAGGACGCCGACATCATCATCCTGCTGCACCGCGAGGA 693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 172186773092156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |