Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq276787 140 1e-28 seq101952 104 8e-18 >seq276787 Length=256 Score = 140 bits (154), Expect = 1e-28 Identities = 181/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 5290 CTGGCCGAGTTCCCGGCCAGCGGTATCGTGCTCAACCCCATCGACTGGGCGCTGATCGAG 5349 ||||| |||| |||||| | ||||||| ||||| |||||||||||| |||||| Sbjct 5 CTGGCGGAGTATCCGGCCTCGGCCTTCGTGCTGAACCCGATCGACTGGGCGACGATCGAA 64 Query 5350 CTGACCAAGGACGCCGAGAACCGTTACATCATCGGCAGCCCGCAGAACGGCACCACTCCG 5409 || || |||||| || || ||| |||||||||||| |||| | ||| ||| Sbjct 65 CTCACGAAGGACACCCAGGGCCGCTACATCATCGGCGACCCGGCCGAGGGCGTGCAGCCG 124 Query 5410 ACCCTCTGGCGTCTGCCGGTGGTGGAAACCCAGGCCATCACTCAGGACGAGTTCCTGACC 5469 || ||| ||||||||||| | |||||||| | ||| || |||||| ||| Sbjct 125 CGGCTGTGGAACCTGCCGGTGGTCGCGACCCAGGCGCAGGCGCAGAACCGGTTCCTCACC 184 Query 5470 GGTGCGTTCTCTCTCGGCGCCCAGATCTTCGACCGCATGGACATCGAGGTTCTGGTTTCC 5529 || || ||| | ||| || ||||||||||| |||||||| |||||||| || | || Sbjct 185 GGAGCCTTCGATATCGCGGCGCAGATCTTCGATCGCATGGAGATCGAGGTGTTGCTGTCG 244 Query 5530 ACCGAGAACG 5539 |||||||||| Sbjct 245 ACCGAGAACG 254 >seq101952 Length=1540 Score = 104 bits (114), Expect = 8e-18 Identities = 129/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 45488 TCGCGTCAGATGAAGCTGTTGGCAAGGGAGATTGGGTGTCCTGTGCTTCCC-CTCTGCCA 45546 || || ||||| |||||| |||| | |||| | | | ||| | | || | |||| ||| Sbjct 865 TCCCGGCAGATCAAGCTGCTGGCCAAGGAGCTCGAGA-TCCCGATCGTCGCGCTCTCCCA 807 Query 45547 GCTCAACCGAGGTTGCGAGTCTCGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGCGCGA 45606 ||||||||| || |||| | ||| |||||||||| || | | |||||||||||| Sbjct 806 GCTCAACCGTGGCCCCGAGACCCGCGCCGACAAGCGCCCCATGATGGCCGACCTGCGCGA 747 Query 45607 GTCCGGCGCCATTGAGCAAGACGCCGACATCGTCATGTTCGTGTACCGCGATGA 45660 ||||||| | | ||||| |||||||||||| |||| | || ||||||| || Sbjct 746 GTCCGGCTCGCTGGAGCAGGACGCCGACATCATCATCCTGCTGCACCGCGAGGA 693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172186773092156