Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq7533 141 1e-28
>seq7533
Length=2710
Score = 141 bits (156), Expect = 1e-28
Identities = 158/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 37444 TTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCT 37503
||||||| || ||||||| |||| ||||| || || |||| |||||| ||||| || |
Sbjct 1027 TTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTT 968
Query 37504 GAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTA 37563
|||||||||| || ||||| ||||||| | |||||| || | |||| | || | |
Sbjct 967 GAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTCCACCA 908
Query 37564 AGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAAT 37623
|||| |||||||| || |||||| ||| |||||||| || | |||| || |||||||
Sbjct 907 AGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAAAT 848
Query 37624 GTCTTTCATCATTTGATAATTTTTTCCAATC 37654
|| | ||| || | |||| | | ||||||
Sbjct 847 GTTTCTCACAATCTTTTAATGTCTCCCAATC 817
Score = 86.0 bits (94), Expect = 7e-12
Identities = 172/250 (69%), Gaps = 5/250 (2%)
Strand=Plus/Minus
Query 37170 AATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAG 37229
||||| || |||||| || | | |||| |||| ||| || | ||||||| ||
Sbjct 1886 AATAAGAATACAAAATTACGAAACATACCT-CATCCCTAGAAATAAGTTCATTACTGAAA 1828
Query 37230 GTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAA 37289
|| ||||| ||||| | ||||| |||||| | ||||||||||| ||||| || ||
Sbjct 1827 GTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAG 1768
Query 37290 AAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAA 37349
|| || || || |||||||||||||| || | | |||| || || || | || |
Sbjct 1767 AAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAATGT--AGCTGTCT 1710
Query 37350 T-CAG-AAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAA 37407
| | | ||||| | | | ||| |||||||| ||||||||| | |||||||
Sbjct 1709 TGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGTAGAGTTTCAA 1650
Query 37408 TTGCTTTTAA 37417
|||| || ||
Sbjct 1649 TTGCATTGAA 1640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590265288551320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |