Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq7533 141 1e-28 >seq7533 Length=2710 Score = 141 bits (156), Expect = 1e-28 Identities = 158/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 37444 TTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCT 37503 ||||||| || ||||||| |||| ||||| || || |||| |||||| ||||| || | Sbjct 1027 TTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTT 968 Query 37504 GAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTA 37563 |||||||||| || ||||| ||||||| | |||||| || | |||| | || | | Sbjct 967 GAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTCCACCA 908 Query 37564 AGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAAT 37623 |||| |||||||| || |||||| ||| |||||||| || | |||| || ||||||| Sbjct 907 AGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAAAT 848 Query 37624 GTCTTTCATCATTTGATAATTTTTTCCAATC 37654 || | ||| || | |||| | | |||||| Sbjct 847 GTTTCTCACAATCTTTTAATGTCTCCCAATC 817 Score = 86.0 bits (94), Expect = 7e-12 Identities = 172/250 (69%), Gaps = 5/250 (2%) Strand=Plus/Minus Query 37170 AATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAG 37229 ||||| || |||||| || | | |||| |||| ||| || | ||||||| || Sbjct 1886 AATAAGAATACAAAATTACGAAACATACCT-CATCCCTAGAAATAAGTTCATTACTGAAA 1828 Query 37230 GTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAA 37289 || ||||| ||||| | ||||| |||||| | ||||||||||| ||||| || || Sbjct 1827 GTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAG 1768 Query 37290 AAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAA 37349 || || || || |||||||||||||| || | | |||| || || || | || | Sbjct 1767 AAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAATGT--AGCTGTCT 1710 Query 37350 T-CAG-AAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAA 37407 | | | ||||| | | | ||| |||||||| ||||||||| | ||||||| Sbjct 1709 TGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGTAGAGTTTCAA 1650 Query 37408 TTGCTTTTAA 37417 |||| || || Sbjct 1649 TTGCATTGAA 1640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590265288551320