Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_017972.1
Length=280538
Score E
Sequences producing significant alignments: (Bits) Value
seq180282 125 1e-23
seq159189 120 5e-22
seq272113 114 2e-20
>seq180282
Length=403
Score = 125 bits (138), Expect = 1e-23
Identities = 222/318 (70%), Gaps = 13/318 (4%)
Strand=Plus/Plus
Query 23020 GCGTAGATCAGTGCCGGGCTTGGTGTGGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTC 23079
||||||||| || || || ||||| || || |||||||| || | || | |
Sbjct 33 GCGTAGATCTTCGCGGGCAGCGGCGTGGTGTTCGAGAACTCCAGCGTCACATGCCCCTCC 92
Query 23080 CATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTG 23139
||||| || |||| || || ||||| |||||||| || || |||||||| ||||| |||
Sbjct 93 CATTCGGGCTCCAATGGGGTCACGTTGACGATGATCCCACACCGCGCATAGGTCGACTTG 152
Query 23140 CCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGT 23199
|| |||||||| || | ||||| ||||| | | ||| | ||| |||| || ||
Sbjct 153 CCAAGGCAGATCACCAGCACGTCGCGCGGCACGCGGAAATATTCGACCGTGCGGGCGAGC 212
Query 23200 GCGAAACTGTTCGGCGGAATGAT-CAGGCCTTGGCCGTTTGGAACGTGCTTCGTAACGAA 23258
||||| ||||||||||| ||||| || | | || | ||| || ||| |||||
Sbjct 213 GCGAAGCTGTTCGGCGGGATGATGCACACGTCGGTC--TTG---CG---GTCG--ACGAA 262
Query 23259 ATTGTCTTCGGTGAAATTCTTTGGATCGACAACCGCGTTATTCAGGTTGGTGAAAACCTT 23318
||| ||| ||| | ||| |||||||| | ||| | | | |||||||| | |||
Sbjct 263 GCTGTTGGCGGCGAAGTCCTTCGGATCGACGATGGCGCTGTCGACATTGGTGAAGATCTT 322
Query 23319 GAATTCGTTACCGCAACG 23336
||| |||| | ||||||
Sbjct 323 GAACTCGT--CGGCAACG 338
>seq159189
Length=1302
Score = 120 bits (132), Expect = 5e-22
Identities = 231/335 (69%), Gaps = 13/335 (4%)
Strand=Plus/Plus
Query 23020 GCGTAGATCAGTGCCGGGCTTGGTGTGGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTC 23079
|||||||| | ||||| || ||||||||||||| ||| | || | | || | |
Sbjct 241 GCGTAGATGCGCGCCGGCAGGGGCGTGGTATTGGAAATCTCGATCGTCACCTGCCCCTCC 300
Query 23080 CATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTG 23139
||||| ||||| || || || || || ||||||||||||||||| ||||| ||||| ||
Sbjct 301 CATTCGGGTTCGAGGGGTGTCACATTCACGATGATGCCGCAACGGGCATAGGTCGACTTC 360
Query 23140 CCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGT 23199
||||||||||| || | || ||||| || ||| | || ||| | |||||
Sbjct 361 CCGAGGCAGATCACCAGCGTGTTGCGCGGGATACGGAAATACTCGACCGTATGAGCCAGC 420
Query 23200 GCGAAACTGTTCGGCGGAATGA-TCAGGCCTTGGCCGTTTGGAACGTGCTTCGTAACGAA 23258
||||| || || || ||||||| ||| || |||| | ||| || |||||
Sbjct 421 GCGAAGCTATTTGGGGGAATGACGCAGACC-GGGCC----AGTACG-----GGTGACGAA 470
Query 23259 ATTGTCTTCGGTGAAATTCTTTGGATCGACAACCGCGTTATTC-AGGTTGGTGAAAACCT 23317
| | || | |||| ||| ||||| || | ||| | | || | |||||||||| ||
Sbjct 471 ACTTTCCGAGCGAAAATCCTTCGGATCCACGATCGC-TGAGTCAACATTGGTGAAAATCT 529
Query 23318 TGAATTCGTTACCGCAACGAATATCGTAGCCGTAG 23352
|||| |||| || || |||||||||||||
Sbjct 530 TGAACTCGTCGGCGACTCGCGCATCGTAGCCGTAG 564
>seq272113
Length=263
Score = 114 bits (126), Expect = 2e-20
Identities = 181/255 (71%), Gaps = 11/255 (4%)
Strand=Plus/Minus
Query 23073 GCCTTTCCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGT 23132
||| | ||| | || |||||||| || ||||| |||||||||||||| |||||||| ||
Sbjct 251 GCCCTCCCAGCCCGGCTCCAGCGGGGTCACGTTGACGATGATGCCGCAGCGCGCATAGGT 192
Query 23133 CGATTTGCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTT 23192
||| ||||| || ||||| || | ||||| || || | | ||| | || |||
Sbjct 191 CGACTTGCCAAGACAGATGACCAGCACGTCGCGAGGTACGCGGAAATACTCGACGGTGCG 132
Query 23193 TGCCAGTGCGAAACTGTTCGGCGGAATGAT-CAGGCCTTGGCCGTTTGGAACGTGCTTCG 23251
||| || ||||| ||||||||||||||||| ||| | | |||| | | || |||
Sbjct 131 TGCAAGCGCGAAGCTGTTCGGCGGAATGATGCAGAC---GTCCGTCTTG--CG---ATCG 80
Query 23252 TAACGAAATTGTCTTCGGTGAAATTCTTTGGATCGACAACCGCGTTATTCAGGTTGGTGA 23311
||||| | | || ||| | ||| |||||||| | || || | | ||||||
Sbjct 79 --ACGAAGCTATTCGGGGCGAACTCCTTCGGATCGACCAAGGCATTGTCGACATTGGTGC 22
Query 23312 AAACCTTGAATTCGT 23326
|||||||||| ||||
Sbjct 21 AAACCTTGAACTCGT 7
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 894484750906640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |