Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq180282 125 1e-23 seq159189 120 5e-22 seq272113 114 2e-20 >seq180282 Length=403 Score = 125 bits (138), Expect = 1e-23 Identities = 222/318 (70%), Gaps = 13/318 (4%) Strand=Plus/Plus Query 23020 GCGTAGATCAGTGCCGGGCTTGGTGTGGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTC 23079 ||||||||| || || || ||||| || || |||||||| || | || | | Sbjct 33 GCGTAGATCTTCGCGGGCAGCGGCGTGGTGTTCGAGAACTCCAGCGTCACATGCCCCTCC 92 Query 23080 CATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTG 23139 ||||| || |||| || || ||||| |||||||| || || |||||||| ||||| ||| Sbjct 93 CATTCGGGCTCCAATGGGGTCACGTTGACGATGATCCCACACCGCGCATAGGTCGACTTG 152 Query 23140 CCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGT 23199 || |||||||| || | ||||| ||||| | | ||| | ||| |||| || || Sbjct 153 CCAAGGCAGATCACCAGCACGTCGCGCGGCACGCGGAAATATTCGACCGTGCGGGCGAGC 212 Query 23200 GCGAAACTGTTCGGCGGAATGAT-CAGGCCTTGGCCGTTTGGAACGTGCTTCGTAACGAA 23258 ||||| ||||||||||| ||||| || | | || | ||| || ||| ||||| Sbjct 213 GCGAAGCTGTTCGGCGGGATGATGCACACGTCGGTC--TTG---CG---GTCG--ACGAA 262 Query 23259 ATTGTCTTCGGTGAAATTCTTTGGATCGACAACCGCGTTATTCAGGTTGGTGAAAACCTT 23318 ||| ||| ||| | ||| |||||||| | ||| | | | |||||||| | ||| Sbjct 263 GCTGTTGGCGGCGAAGTCCTTCGGATCGACGATGGCGCTGTCGACATTGGTGAAGATCTT 322 Query 23319 GAATTCGTTACCGCAACG 23336 ||| |||| | |||||| Sbjct 323 GAACTCGT--CGGCAACG 338 >seq159189 Length=1302 Score = 120 bits (132), Expect = 5e-22 Identities = 231/335 (69%), Gaps = 13/335 (4%) Strand=Plus/Plus Query 23020 GCGTAGATCAGTGCCGGGCTTGGTGTGGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTC 23079 |||||||| | ||||| || ||||||||||||| ||| | || | | || | | Sbjct 241 GCGTAGATGCGCGCCGGCAGGGGCGTGGTATTGGAAATCTCGATCGTCACCTGCCCCTCC 300 Query 23080 CATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTG 23139 ||||| ||||| || || || || || ||||||||||||||||| ||||| ||||| || Sbjct 301 CATTCGGGTTCGAGGGGTGTCACATTCACGATGATGCCGCAACGGGCATAGGTCGACTTC 360 Query 23140 CCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGT 23199 ||||||||||| || | || ||||| || ||| | || ||| | ||||| Sbjct 361 CCGAGGCAGATCACCAGCGTGTTGCGCGGGATACGGAAATACTCGACCGTATGAGCCAGC 420 Query 23200 GCGAAACTGTTCGGCGGAATGA-TCAGGCCTTGGCCGTTTGGAACGTGCTTCGTAACGAA 23258 ||||| || || || ||||||| ||| || |||| | ||| || ||||| Sbjct 421 GCGAAGCTATTTGGGGGAATGACGCAGACC-GGGCC----AGTACG-----GGTGACGAA 470 Query 23259 ATTGTCTTCGGTGAAATTCTTTGGATCGACAACCGCGTTATTC-AGGTTGGTGAAAACCT 23317 | | || | |||| ||| ||||| || | ||| | | || | |||||||||| || Sbjct 471 ACTTTCCGAGCGAAAATCCTTCGGATCCACGATCGC-TGAGTCAACATTGGTGAAAATCT 529 Query 23318 TGAATTCGTTACCGCAACGAATATCGTAGCCGTAG 23352 |||| |||| || || ||||||||||||| Sbjct 530 TGAACTCGTCGGCGACTCGCGCATCGTAGCCGTAG 564 >seq272113 Length=263 Score = 114 bits (126), Expect = 2e-20 Identities = 181/255 (71%), Gaps = 11/255 (4%) Strand=Plus/Minus Query 23073 GCCTTTCCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGT 23132 ||| | ||| | || |||||||| || ||||| |||||||||||||| |||||||| || Sbjct 251 GCCCTCCCAGCCCGGCTCCAGCGGGGTCACGTTGACGATGATGCCGCAGCGCGCATAGGT 192 Query 23133 CGATTTGCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTT 23192 ||| ||||| || ||||| || | ||||| || || | | ||| | || ||| Sbjct 191 CGACTTGCCAAGACAGATGACCAGCACGTCGCGAGGTACGCGGAAATACTCGACGGTGCG 132 Query 23193 TGCCAGTGCGAAACTGTTCGGCGGAATGAT-CAGGCCTTGGCCGTTTGGAACGTGCTTCG 23251 ||| || ||||| ||||||||||||||||| ||| | | |||| | | || ||| Sbjct 131 TGCAAGCGCGAAGCTGTTCGGCGGAATGATGCAGAC---GTCCGTCTTG--CG---ATCG 80 Query 23252 TAACGAAATTGTCTTCGGTGAAATTCTTTGGATCGACAACCGCGTTATTCAGGTTGGTGA 23311 ||||| | | || ||| | ||| |||||||| | || || | | |||||| Sbjct 79 --ACGAAGCTATTCGGGGCGAACTCCTTCGGATCGACCAAGGCATTGTCGACATTGGTGC 22 Query 23312 AAACCTTGAATTCGT 23326 |||||||||| |||| Sbjct 21 AAACCTTGAACTCGT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 894484750906640