Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_018836.1 Length=50255 Score E Sequences producing significant alignments: (Bits) Value seq42003 262 1e-65 >seq42003 Length=910 Score = 262 bits (290), Expect = 1e-65 Identities = 476/692 (69%), Gaps = 46/692 (7%) Strand=Plus/Plus Query 39433 GCGGCGTGAGTGAGGGGCATGTGCCGG-GCGAAGTGCTCCTCCATCTGCTCGGCCGCCAT 39491 || ||||| ||||| |||||| | | || || || |||||||||||||||| ||||| Sbjct 153 GCCGCGTGGGTGAGCGGCATGAGGGGCTGCCAAA-GCGCCTCCATCTGCTCGGCGGCCAT 211 Query 39492 CTCGATCTCGCGCTGCGGGAACGAGGGGAACCGCGCGGCCTCCGCGGTGGTGCGCAGGCT 39551 ||||||||||||||||||||| |||||||| ||| | |||| | |||||||| Sbjct 212 CTCGATCTCGCGCTGCGGGAAAGAGGGGAAGTGCGAGTCCTCGTGCTTCGTGCGCAGCGA 271 Query 39552 CAGGAAGTGCATCAGGCTGCGGGCGTTGCAGGTGGCGAAGAACGAGGTGTACGTACCGAC 39611 ||||||| ||| || ||| ||||| ||| || | | ||||| ||| | || Sbjct 272 GAGGAAGTTCATGAGCGAGCGCGCGTTCACGGTCACGTACATCGAGGAGTAGATCGACAC 331 Query 39612 GGGGAGGGCGGAGCGGGCGACCTCGCGGGCGATGCCGGCCCGGAGCATCACCTGGTAG-- 39669 || || ||| |||||||||||||||||| | ||||| |||||| | ||||| Sbjct 332 CGGCAGCACGGCGCGGGCGACCTCGCGGGCCACACCGGCGTCGAGCATGCGCAGGTAGCT 391 Query 39670 -GCGT-----TC-CAGGCGTGGCGGTAGCTCTCGCGGGCGACGTCCCGCATCACGTTGTA 39722 |||| || | ||| |||| ||||||| | ||||| | | || Sbjct 392 CGCGTAGGCCTCGCTCGCGACGCGGCGGCTCTCGGCGACGACG---------AGTTCGTG 442 Query 39723 CTGGAGCGGGGTGCCCGGCTCGAACCGGTAGGCGCCAGGCTTGCCGACCTGCTGGAGGTT 39782 ||| ||||||||| ||||| ||||||||| ||||||||||||||| ||| Sbjct 443 CTGCTCGGGGGTGCCCTCTTCGAAGACGTAGGCGCCGGGCTTGCCGACCTGCACGAGACG 502 Query 39783 GCGGTCCTCGGCCGGG-ATGTAGAACACCGGCTTCAACTCCCGGTAGCGCGCTGACTCCT 39841 ||| || ||||||| | |||||| || || || || ||||||||| | ||||| Sbjct 503 GCGCTCGG-GGCCGGGCACGTAGAAGACGGGACGCAGCTGACGGTAGCGCCCGCTCTCCT 561 Query 39842 CGTTGTAACTCCAGCCCACCCTGTGACGCATCCACTCACGGGCCACGAACATGGGGGCCT 39901 ||||||| || | | | ||| ||||| |||| ||| ||||| || || |||| Sbjct 562 CGTTGTAGG---AGGCGATGCGGTGCCGCATGAACTCGCGGAAGACGAAGATCGGCGCCT 618 Query 39902 GGACCAGGAAGGTCATCGAGTTGTGCTCGAAGGGGCTGCCGTGCCGGTCCCGCATCAGGT 39961 | || |||||| | |||||||||||||||||| |||||| ||||| |||||||||| Sbjct 619 GCACGTAGAAGGTGAGCGAGTTGTGCTCGAAGGGCGAGCCGTGGCGGTCGCGCATCAGGT 678 Query 39962 AGTTGATCAGGCC-----GGCGGTCGAACCACT-GGAGCCTGCGGCCTCCG--------- 40006 ||||||| ||||| ||||||| | || || || |||||| ||| Sbjct 679 AGTTGATGAGGCCCTTGTCGCGGTCGGTCGCCTCGGTTCCGGCGGCCGCCGCATCCAGCG 738 Query 40007 ------CTCCCAGGGTGGAGACTCGGGCGGCCTGGACCACGTCGTAGTCCATCGCGCTGG 40060 | ||| |||| || || || ||||| | ||||||| |||| ||||||| | Sbjct 739 TCTTCTCGCCCTGGGTCGACACGCGCGCGGCGAACAGCACGTCGGAGTCGCTCGCGCTCG 798 Query 40061 TGCGCATCGGCTGGACGGTGATGTCGGATCGG 40092 ||||| | ||| ||| | | ||||| ||| Sbjct 799 AGCGCACCAGCTCGACCTTCACATCGGAGCGG 830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160165657473582