Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_018848.1
Length=37612
Score E
Sequences producing significant alignments: (Bits) Value
seq248049 192 1e-44
seq153771 179 9e-41
seq136878 113 1e-20
>seq248049
Length=1043
Score = 192 bits (212), Expect = 1e-44
Identities = 260/359 (72%), Gaps = 5/359 (1%)
Strand=Plus/Plus
Query 30169 ATGGCCGGAGACACCCCGATCACCGTTGTGGGCAACGTCGTTGCCGACCCCGAACTCAGG 30228
||||| || |||||| ||||| || || |||||| | ||||| ||||| || |
Sbjct 553 ATGGCAGGCGACACCATCATCACGGTGGTCGGCAACCTGACGGCCGATCCCGAGCTGCGC 612
Query 30229 TTCACCCCCGCCGGCGCCGCCGTCGCGAACTTCCGGCTCGCCTCGACCCCCCGCACGTTC 30288
|||||| || ||||||| ||||| ||||||||| |||| ||||||||||| ||| ||
Sbjct 613 TTCACCGCCTCCGGCGCGGCCGTTGCGAACTTCACCGTCGCATCGACCCCCCGGACGCTC 672
Query 30289 GACCGCACCGCCAACGAATGGCGAGACGGCGAGACCCTGTTCCTGTCCGTCTCCGTATGG 30348
||||||||| | ||| ||| ||||||||| |||| |||||| | | | | |||
Sbjct 673 GACCGCACCAGCGGCGAGTGGAAGGACGGCGAGGCCCTCTTCCTGCGCTGCAACATCTGG 732
Query 30349 CGCCAGCAGGCCGAGAACGTCGCCGGATCCATCCACCGCGGCGACCGCGTGATCGTCGTC 30408
|| ||| |||||||||||| | | || || ||||||| |||||| |||||| |
Sbjct 733 CGGCAGGCTGCCGAGAACGTCACGGAGTCGCTCACCCGCGGCTCCCGCGTCATCGTCACC 792
Query 30409 GGCACCCTCGCCCAGCGCACGTACGAG---AAGGACGGCGAG-CGCCGAGCGTCCTACGA 30464
||| ||| ||||||| | |||| ||||| |||||| || | |||| | |||
Sbjct 793 GGCCGGCTCAAGCAGCGCAGCTTCGAGACCAAGGAAGGCGAGAAGCGCACCGTCAT-CGA 851
Query 30465 GGTCAAGGCCGAGGAAGTCGGCCCCGCGCTCAAGAACGCGACCGCCACTGTCACCAAGG 30523
| | ||| ||| || |||||||| |||| | |||||||||||| |||| |||||
Sbjct 852 GCTGGAGGTCGACGAGATCGGCCCCTCGCTGCGGTACGCGACCGCCAAGGTCAACAAGG 910
>seq153771
Length=831
Score = 179 bits (198), Expect = 9e-41
Identities = 254/351 (72%), Gaps = 11/351 (3%)
Strand=Plus/Minus
Query 30174 CGGAGACACCCCGATCACCGTTGTGGGCAACGTCGTTGCCGACCCCGAACTCAGGTTCAC 30233
|||||||||| ||||| | || |||||| |||| | ||||||||| || |||||||
Sbjct 441 CGGAGACACCTACGTCACCATCGTCGGCAACCTCGTCGACGACCCCGAGCTGCGGTTCAC 382
Query 30234 CCCCGCCGGCGCCGCCGTCGCGAACTTCCGGCTCGCCTCGACCCCCCGCACGTTCGACCG 30293
||| | |||||||| ||||| |||||||| ||||||| ||||| ||||||||| ||||
Sbjct 381 GCCCTCGGGCGCCGCAGTCGCCAACTTCCGCATCGCCTCCACCCCGCGCACGTTCAACCG 322
Query 30294 CACCGCCAACGAATGGCGAGACGGCGAGACCCTGTTCCTGTCCGTCTCCGTATGGCGCCA 30353
||||||| ||| ||||| ||| | ||||||| || ||| || ||||| ||
Sbjct 321 TCAGACCAACGACTGGGAGGACGGTGAGGGCATGTTCCTCACCTGCTCGGTGTGGCGTCA 262
Query 30354 GCAGGCCGAGAACGTCGCCGGATCCATCCACCGCGGCGACCGCGTGATCGTCGTC--GGC 30411
| ||||||||||||||| | ||| | || |||||| |||| |||||||| ||
Sbjct 261 GGCGGCCGAGAACGTCGCGGAGTCCTTGCAGCGCGGCATGCGCG---TCGTCGTCCAGGG 205
Query 30412 AC-CCTCGCCCAGCGCACGTACGAGA---AGGACGGCGAG-CGCCGAGCGTCCTACGAGG 30466
|| ||| |||||| ||||||| || |||||| || | ||| || ||||
Sbjct 204 ACGGCTCAAGTCGCGCACCTACGAGACCCGCGAGGGCGAGAAGCGCACCGT-CTTCGAGA 146
Query 30467 TCAAGGCCGAGGAAGTCGGCCCCGCGCTCAAGAACGCGACCGCCACTGTCA 30517
|| ||| |||||| ||||| || || ||| ||| || |||| ||||
Sbjct 145 TCGAGGTCGAGGAGGTCGGGCCGAGCCTGAAGTTCGCCACGGCCAAGGTCA 95
>seq136878
Length=1830
Score = 113 bits (124), Expect = 1e-20
Identities = 243/355 (68%), Gaps = 9/355 (3%)
Strand=Plus/Minus
Query 30169 ATGGCCGGAGACACCCCGATCACCGTTGTGGGCAACGTCGTTGCCGACCCCGAACTCAGG 30228
|||||||| ||||| ||||||| | || ||| | || || |||||||| |
Sbjct 405 ATGGCCGGCGACACGATCCTCACCGTCATCGGGAACCTGACCGCGGATCCCGAACTGCGT 346
Query 30229 TTCACCCCCGCCGGCGCCGCCGTCGCGAACTTCCGGCTCGCCTCGACCCCCCGCACGTTC 30288
|||||||| |||| || || || || |||||| | || || || || || | ||||
Sbjct 345 TTCACCCCGTCCGGTGCGGCGGTGGCCAACTTCACCGTTGCGTCCACGCCGCGGATGTTC 286
Query 30289 GACCGCACCGCCAACGAATGGCGAGACGGCGAGACCCTGTTCCTGTCCGT-CTCCGTATG 30347
||||| ||||||||||| |||||||||| | |||||| || | || | | | ||
Sbjct 285 GACCGTCAGACCAACGAATGGAAAGACGGCGAGGCACTGTTCATG-CGGTGCAGCATCTG 227
Query 30348 GCGCCAGCAGGCCGAGAACGTCGCCG-GATCCATCCACCGCGGCGACCGCGTGATCGTCG 30406
||| || |||||||||||| || | || || || | || | || || ||||| |
Sbjct 226 GCGGGAGGCGGCCGAGAACGTGGCGGAGAGCC-TCACCAAGGGTGCTCGTGTCATCGT-G 169
Query 30407 TCGGCAC-CCTCGCCCAGCGCACGTACGAGA---AGGACGGCGAGCGCCGAGCGTCCTAC 30462
|||| | ||| |||||| | ||||| | || || ||| || || |
Sbjct 168 TCGGGTCGGCTCAAGCAGCGCTCCTACGAAACCCGCGAGGGTGAGAAGCGCACGGTGGTC 109
Query 30463 GAGGTCAAGGCCGAGGAAGTCGGCCCCGCGCTCAAGAACGCGACCGCCACTGTCA 30517
||| || ||| |||||| ||||| ||| |||| ||| |||||||||||| ||||
Sbjct 108 GAGCTCGAGGTCGAGGAGGTCGGTCCCTCGCTGAAGTACGCGACCGCCAAGGTCA 54
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119841177567604
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |