Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq50670 127 3e-24 seq84152 118 1e-21 seq273731 111 2e-19 seq103796 89.7 7e-13 >seq50670 Length=586 Score = 127 bits (140), Expect = 3e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 84449 TGCTGGATCGAACCCTCGGCCGCGACGATTGACTTCCAGACCGCCTCGGTGTTCAGGCCC 84508 ||||||| |||||| | ||| ||| || |||||||| || ||| ||||| | | Sbjct 289 TGCTGGACCGAACCGCCCTGTTCGAGGATCGAGTTCCAGACGGCATCGCTGTTCTTGGAC 348 Query 84509 AGTTCACCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACAGGGTC 84568 || | ||| ||| | || | ||||||||| | ||| ||||||||| ||| Sbjct 349 TTCTCGCTCAGCATCTTTTCGAGATACGGGTTCTTGATCGAGAAGCTGCCCGACAGCGTC 408 Query 84569 TTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCCTCCGCAGAGG 84628 |||||| | || |||||||||||||||||||||| ||| ||||||| ||||||| | Sbjct 409 TTGTGCGTGTAGATGTTGGCCGGGATCGGCTCGATGCACGCGCAGGTGCCGCCGCAGATG 468 Query 84629 ATCGAGGACGAGGCGTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTC 84678 |||||| ||| ||| | ||||| | |||| |||| | ||||||||| Sbjct 469 ATCGAGATCGACGCGGTCGGCGCGATCGCCATCTTGCAGCTGAACCGCTC 518 >seq84152 Length=5826 Score = 118 bits (130), Expect = 1e-21 Identities = 500/760 (66%), Gaps = 56/760 (7%) Strand=Plus/Minus Query 136647 GCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGGC 136706 |||||||||| ||| || || ||||||||| |||| ||||||| || | | Sbjct 5477 GCCCTTCACGTTGAGCACCTGACGCAGGGTGTGGTCGATCGACACGAGGCGCTCGGCGTC 5418 Query 136707 CTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATC-ACGCCAGCGT 136765 |||| || |||||||| |||||| ||| |||||| ||||||||| || || || Sbjct 5417 GGCCATCACGACGTCGATGCTCTTGTACGCCTGCGGGATCTCGTCGATCCACTCC-GCCC 5359 Query 136766 CCTTGCGGCACTCCACGCCC-TCG--GTGGCCTTGATCTGGTCCTCCAGGGTGAAG-GTC 136821 | | ||| |||| | || || | ||||| || | | |||| |||| | | | Sbjct 5358 CGTGCCGGTACTCGATCCCGGTCATCGCGGCCTCGAGATCGGCCTC---GGTGTACCGAC 5302 Query 136822 GCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCA--GAACG 136879 || ||||||| || ||| || | | || ||||||||||||| ||| || || || Sbjct 5301 GC-TTGGCCTCGGCCCGTGAGAACCGACGCCCCGCGCCGTGCGGCGCCGAACACAGACCG 5243 Query 136880 AGTCCGCATTG-CCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATG 136938 |||| || ||||||||| ||||||||||||| | |||||||||||| |||||| Sbjct 5242 ---CCGCCGTGTCCCTTGCCGGTCACGATGTAGGACCGCGTCCCCATCGAGCCCGGGATG 5186 Query 136939 AT--CCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACT 136996 || |||| || ||| ||||| | ||| ||||||||||||| | || || Sbjct 5185 ATGCCCCGCACAC--CCTCGTGCGCGTCGATCGCACCCTTGCGGGTCAGCCACACGTCCT 5128 Query 136997 CGTCGAAGTGGAATTCCTTCT-GGAC---GTAGTTGTGGTGGCAGTTCA-CCGCTTCCTT 137051 | || ||| || ||| |||| ||||||||||||| ||| | |||| || | Sbjct 5127 TGCCGCCGTG----TCGCTCTCGGACGGTGTAGTTGTGGTGGGTGTTGATCCGC-TCGGT 5073 Query 137052 GTCCGTCTTGAACGG-----CGGCAGGCCCGAC---GCCCGC-ATGGCCTCCAGGACCCG 137102 || || | ||| || | | || || | ||| | |||| | ||| || Sbjct 5072 CTCGAGCTCGGCCGGGTCACCGTCGTGACCTACCCAGTGCGCGAACGCCTGCCGGAAGCG 5013 Query 137103 GACCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCC-- 137160 |||||||| ||||||| ||||||| ||| |||| || | | | || Sbjct 5012 ATCCATCATCTCAGCGCGGTTCTCGAGCGCGAACCGCTGTGCCCA--CGCCAGATCCCGG 4955 Query 137161 ACGTAGTCGTGGAACTCCGGC-TCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCC---AG 137216 | ||| | | || ||||||| || | || || | || |||||| || | || Sbjct 4954 AGGTACACCTCGAGCTCCGGCGTCTCGGACG-GCAGGTACGCGAGGTCCGGGTTCGGGAG 4896 Query 137217 CGGCTTGCGCCCGTCACGACGCAGCATCATCTCCTTGGCCTTCTCGATGAAGATGCGGC- 137275 | || || ||| | || || || || || || ||||| | || || Sbjct 4895 CACGATGTGC----CACTTCCTGGC--CAGCTTCTGCGCGATCGCGATG-TGTCGCTGCG 4843 Query 137276 CGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGGTCCT 137335 |||| ||||||||| || ||||| || ||||| || | || ||| || || | | || Sbjct 4842 CGATCCGGTTGCCGACACCCCGCGAACCGGAGTGCAGGAACATCCACACCCGATCGGACT 4783 Query 137336 CGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCCGCCCAG 137375 |||||||||| | |||||||||||||||||||||||| || Sbjct 4782 CGTCGAGGCACAGCTCGATGAAGTGGTTGCCGCCGCCGAG 4743 >seq273731 Length=579 Score = 111 bits (122), Expect = 2e-19 Identities = 224/327 (69%), Gaps = 8/327 (2%) Strand=Plus/Plus Query 83570 CATGTACTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGACCTC 83629 |||||| |||| ||| || |||| ||| ||| ||||||||||| | | ||||| || Sbjct 27 CATGTAGTCGTACTTGTCCTTCATCTCCTTGTATTCGAGGAAGGCCGAGTATTCGACTTC 86 Query 83630 GGGCAGGCCCAGGGTGTCGATCAG-CGTCGAGTAGGCGTCGATGTGGTTGGCCTCGGCGG 83688 ||||| ||| | || |||| || | | | || || |||||||| | | |||| | Sbjct 87 GGGCATGCCGATCGTATCGAGAAGATGGCTA-TACGCCGCGATGTGGATCGTCTCGATGT 145 Query 83689 CGATGAACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAGCGCGGGCCGTACTTCT 83748 | ||||||| |||||||||| ||||||| | | | ||| | ||| ||| | || Sbjct 146 TGGAGAACGCGGACAGCATCATCAGCACTTCGGTGGGTTTGAACACCTGGCTGTAGTGCT 205 Query 83749 CGAAGTAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTGCGTCA 83808 | ||||| | ||| |||||||| | ||| |||||||| ||||||| ||||| | Sbjct 206 TCATGTAGCAGTTGTTCACCTCGACGTCCGACTGCGTGAAGAAACGGAAGATCTGCGTGA 265 Query 83809 GCAGGGACTTCTCGTCCG---GCGTCAGCTTCTCGTTCCAGTCCTGGATGTCCTGGTCCA 83865 || || | | | |||| | |||| || || |||||||| || ||| | | | | Sbjct 266 CCA--GATTGCGC-TCCGAGTCTGACAGCGTCCGGTGCCAGTCCTTGACGTCATCGGCGA 322 Query 83866 TGGGGGCTTCGTGCGGAAGCCAGTGCA 83892 || | || | ||| |||||||||| Sbjct 323 GCGGCACCTCTTCCGGCAGCCAGTGCA 349 >seq103796 Length=610 Score = 89.7 bits (98), Expect = 7e-13 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 83369 CTTGATCATCGACTCCACGTGATGGCTCTCGTCGCGGATCGACCACTCGACGATCGTGGT 83428 |||||| || ||| ||| |||||||||||||||||||||| ||||||| | Sbjct 461 CTTGATGATGCCCTCGCAGTGCAGGCTCTCGTCGCGGATCGACCAGGTGACGATCTGGCC 520 Query 83429 CATGCCCTTCATGCGATTGCGACGCTGGAAGGACATCAGCAGAGCGAAGGACGAGAAAAG 83488 |||||||||||| ||| ||| ||||| |||||||| ||||| |||| ||| || Sbjct 521 CATGCCCTTCATCTTGTTGAAGCGCGGGAAGTTCATCAGCATCGCGAACGACGCGAACAG 580 Query 83489 CTGCATCCCCTCGCCGAAG--GCCGA 83512 ||| | |||||| |||| ||||| Sbjct 581 CTGGACGCCCTCGGTGAAGCCGCCGA 606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 687753660375600