Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_019405.1
Length=215710
Score E
Sequences producing significant alignments: (Bits) Value
seq50670 127 3e-24
seq84152 118 1e-21
seq273731 111 2e-19
seq103796 89.7 7e-13
>seq50670
Length=586
Score = 127 bits (140), Expect = 3e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 84449 TGCTGGATCGAACCCTCGGCCGCGACGATTGACTTCCAGACCGCCTCGGTGTTCAGGCCC 84508
||||||| |||||| | ||| ||| || |||||||| || ||| ||||| | |
Sbjct 289 TGCTGGACCGAACCGCCCTGTTCGAGGATCGAGTTCCAGACGGCATCGCTGTTCTTGGAC 348
Query 84509 AGTTCACCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACAGGGTC 84568
|| | ||| ||| | || | ||||||||| | ||| ||||||||| |||
Sbjct 349 TTCTCGCTCAGCATCTTTTCGAGATACGGGTTCTTGATCGAGAAGCTGCCCGACAGCGTC 408
Query 84569 TTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCCTCCGCAGAGG 84628
|||||| | || |||||||||||||||||||||| ||| ||||||| ||||||| |
Sbjct 409 TTGTGCGTGTAGATGTTGGCCGGGATCGGCTCGATGCACGCGCAGGTGCCGCCGCAGATG 468
Query 84629 ATCGAGGACGAGGCGTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTC 84678
|||||| ||| ||| | ||||| | |||| |||| | |||||||||
Sbjct 469 ATCGAGATCGACGCGGTCGGCGCGATCGCCATCTTGCAGCTGAACCGCTC 518
>seq84152
Length=5826
Score = 118 bits (130), Expect = 1e-21
Identities = 500/760 (66%), Gaps = 56/760 (7%)
Strand=Plus/Minus
Query 136647 GCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGGC 136706
|||||||||| ||| || || ||||||||| |||| ||||||| || | |
Sbjct 5477 GCCCTTCACGTTGAGCACCTGACGCAGGGTGTGGTCGATCGACACGAGGCGCTCGGCGTC 5418
Query 136707 CTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATC-ACGCCAGCGT 136765
|||| || |||||||| |||||| ||| |||||| ||||||||| || || ||
Sbjct 5417 GGCCATCACGACGTCGATGCTCTTGTACGCCTGCGGGATCTCGTCGATCCACTCC-GCCC 5359
Query 136766 CCTTGCGGCACTCCACGCCC-TCG--GTGGCCTTGATCTGGTCCTCCAGGGTGAAG-GTC 136821
| | ||| |||| | || || | ||||| || | | |||| |||| | | |
Sbjct 5358 CGTGCCGGTACTCGATCCCGGTCATCGCGGCCTCGAGATCGGCCTC---GGTGTACCGAC 5302
Query 136822 GCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCA--GAACG 136879
|| ||||||| || ||| || | | || ||||||||||||| ||| || || ||
Sbjct 5301 GC-TTGGCCTCGGCCCGTGAGAACCGACGCCCCGCGCCGTGCGGCGCCGAACACAGACCG 5243
Query 136880 AGTCCGCATTG-CCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATG 136938
|||| || ||||||||| ||||||||||||| | |||||||||||| ||||||
Sbjct 5242 ---CCGCCGTGTCCCTTGCCGGTCACGATGTAGGACCGCGTCCCCATCGAGCCCGGGATG 5186
Query 136939 AT--CCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACT 136996
|| |||| || ||| ||||| | ||| ||||||||||||| | || ||
Sbjct 5185 ATGCCCCGCACAC--CCTCGTGCGCGTCGATCGCACCCTTGCGGGTCAGCCACACGTCCT 5128
Query 136997 CGTCGAAGTGGAATTCCTTCT-GGAC---GTAGTTGTGGTGGCAGTTCA-CCGCTTCCTT 137051
| || ||| || ||| |||| ||||||||||||| ||| | |||| || |
Sbjct 5127 TGCCGCCGTG----TCGCTCTCGGACGGTGTAGTTGTGGTGGGTGTTGATCCGC-TCGGT 5073
Query 137052 GTCCGTCTTGAACGG-----CGGCAGGCCCGAC---GCCCGC-ATGGCCTCCAGGACCCG 137102
|| || | ||| || | | || || | ||| | |||| | ||| ||
Sbjct 5072 CTCGAGCTCGGCCGGGTCACCGTCGTGACCTACCCAGTGCGCGAACGCCTGCCGGAAGCG 5013
Query 137103 GACCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCC-- 137160
|||||||| ||||||| ||||||| ||| |||| || | | | ||
Sbjct 5012 ATCCATCATCTCAGCGCGGTTCTCGAGCGCGAACCGCTGTGCCCA--CGCCAGATCCCGG 4955
Query 137161 ACGTAGTCGTGGAACTCCGGC-TCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCC---AG 137216
| ||| | | || ||||||| || | || || | || |||||| || | ||
Sbjct 4954 AGGTACACCTCGAGCTCCGGCGTCTCGGACG-GCAGGTACGCGAGGTCCGGGTTCGGGAG 4896
Query 137217 CGGCTTGCGCCCGTCACGACGCAGCATCATCTCCTTGGCCTTCTCGATGAAGATGCGGC- 137275
| || || ||| | || || || || || || ||||| | || ||
Sbjct 4895 CACGATGTGC----CACTTCCTGGC--CAGCTTCTGCGCGATCGCGATG-TGTCGCTGCG 4843
Query 137276 CGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGGTCCT 137335
|||| ||||||||| || ||||| || ||||| || | || ||| || || | | ||
Sbjct 4842 CGATCCGGTTGCCGACACCCCGCGAACCGGAGTGCAGGAACATCCACACCCGATCGGACT 4783
Query 137336 CGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCCGCCCAG 137375
|||||||||| | |||||||||||||||||||||||| ||
Sbjct 4782 CGTCGAGGCACAGCTCGATGAAGTGGTTGCCGCCGCCGAG 4743
>seq273731
Length=579
Score = 111 bits (122), Expect = 2e-19
Identities = 224/327 (69%), Gaps = 8/327 (2%)
Strand=Plus/Plus
Query 83570 CATGTACTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGACCTC 83629
|||||| |||| ||| || |||| ||| ||| ||||||||||| | | ||||| ||
Sbjct 27 CATGTAGTCGTACTTGTCCTTCATCTCCTTGTATTCGAGGAAGGCCGAGTATTCGACTTC 86
Query 83630 GGGCAGGCCCAGGGTGTCGATCAG-CGTCGAGTAGGCGTCGATGTGGTTGGCCTCGGCGG 83688
||||| ||| | || |||| || | | | || || |||||||| | | |||| |
Sbjct 87 GGGCATGCCGATCGTATCGAGAAGATGGCTA-TACGCCGCGATGTGGATCGTCTCGATGT 145
Query 83689 CGATGAACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAGCGCGGGCCGTACTTCT 83748
| ||||||| |||||||||| ||||||| | | | ||| | ||| ||| | ||
Sbjct 146 TGGAGAACGCGGACAGCATCATCAGCACTTCGGTGGGTTTGAACACCTGGCTGTAGTGCT 205
Query 83749 CGAAGTAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTGCGTCA 83808
| ||||| | ||| |||||||| | ||| |||||||| ||||||| ||||| |
Sbjct 206 TCATGTAGCAGTTGTTCACCTCGACGTCCGACTGCGTGAAGAAACGGAAGATCTGCGTGA 265
Query 83809 GCAGGGACTTCTCGTCCG---GCGTCAGCTTCTCGTTCCAGTCCTGGATGTCCTGGTCCA 83865
|| || | | | |||| | |||| || || |||||||| || ||| | | | |
Sbjct 266 CCA--GATTGCGC-TCCGAGTCTGACAGCGTCCGGTGCCAGTCCTTGACGTCATCGGCGA 322
Query 83866 TGGGGGCTTCGTGCGGAAGCCAGTGCA 83892
|| | || | ||| ||||||||||
Sbjct 323 GCGGCACCTCTTCCGGCAGCCAGTGCA 349
>seq103796
Length=610
Score = 89.7 bits (98), Expect = 7e-13
Identities = 108/146 (74%), Gaps = 2/146 (1%)
Strand=Plus/Plus
Query 83369 CTTGATCATCGACTCCACGTGATGGCTCTCGTCGCGGATCGACCACTCGACGATCGTGGT 83428
|||||| || ||| ||| |||||||||||||||||||||| ||||||| |
Sbjct 461 CTTGATGATGCCCTCGCAGTGCAGGCTCTCGTCGCGGATCGACCAGGTGACGATCTGGCC 520
Query 83429 CATGCCCTTCATGCGATTGCGACGCTGGAAGGACATCAGCAGAGCGAAGGACGAGAAAAG 83488
|||||||||||| ||| ||| ||||| |||||||| ||||| |||| ||| ||
Sbjct 521 CATGCCCTTCATCTTGTTGAAGCGCGGGAAGTTCATCAGCATCGCGAACGACGCGAACAG 580
Query 83489 CTGCATCCCCTCGCCGAAG--GCCGA 83512
||| | |||||| |||| |||||
Sbjct 581 CTGGACGCCCTCGGTGAAGCCGCCGA 606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 687753660375600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |