Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq103796 192 8e-44 seq12676 105 1e-17 seq109665 102 1e-16 seq84152 98.7 1e-15 seq103797 91.5 2e-13 seq109666 89.7 7e-13 seq179873 84.2 3e-11 >seq103796 Length=610 Score = 192 bits (212), Expect = 8e-44 Identities = 321/458 (70%), Gaps = 7/458 (2%) Strand=Plus/Plus Query 83157 TACTCGGTCGAGCGCTGCTCGAAGAAGTTGGCGTGGGTCGGGGC-GTTCATGATCCAGTC 83215 || ||||||| |||||| ||||||||||||||||| ||| || ||||| ||| | Sbjct 153 TATTCGGTCGCGCGCTGTTCGAAGAAGTTGGCGTGC-TCGACGCCGTTCAGCATCGGCGC 211 Query 83216 GAGCCAGTCGAAGGGGTTCTCCTTCTGGCCGTAGTTGGGCTTCATGCCCAGTTGCAGCCA 83275 |||||| | |||| ||| | |||| | ||||||| ||| || || | Sbjct 212 GAGCCACGGCAGCGGGTGCTCGTCGATCATGTAGATCGGCTTCAGGCCGAGCTGGGTCAT 271 Query 83276 CCGGCGGTCGGCGATGTAGCGGATGTACTTCTTGGTGTCCTCGGGCGTGACGCCGTCGAC 83335 || | |||||||||| ||||||||||||||||| | |||| ||| || | ||||| ||| Sbjct 272 GCGCCAGTCGGCGATGAAGCGGATGTACTTCTTGATCTCCTTGGGGGTCATGCCGTTGAC 331 Query 83336 CTCGCCCAGGGCGAAGGCTTGGTCGATGAAGGCGTCTTCCAGGTCGACCATCCGGCGGCC 83395 | ||||| ||||||| |||||||||| ||| || ||| || | || ||| Sbjct 332 CGGGCCCATCTCGAAGGCGAGGTCGATGAAATTGTCCTCGAGGCGGATCGTCGTCTGGCA 391 Query 83396 GGCGTCGTAGATGCGCTTCTTGGTCTCGTCGTTCCAGGCGCGCGGGTGCTCCTTGATCAA 83455 | ||||| |||| | |||| | | | | || |||| | || |||||| || Sbjct 392 GACGTCGGCGATGTCGTCCTTGACCGCCTTGGTC-AGGCACT--GGCGCTCCTGACAGAA 448 Query 83456 CTCGTGCAGGAGCTTGATCATGCTCTCGACGTGGTGGGTCTCGTCGCGGATCGACCACTC 83515 ||| | | |||||| |||| |||| ||| || ||||||||||||||||||| Sbjct 449 GGTGTGGAACATCTTGATGATGCCCTCGCAGTGCAGGCTCTCGTCGCGGATCGACCAGGT 508 Query 83516 GACGATCGTGGTCATGCCCTTCATCAGGCCGCGCCGCTGGTAGTTCATCAGCAGGGCGAA 83575 ||||||| | ||||||||||||| | | ||| || |||||||||||| ||||| Sbjct 509 GACGATCTGGCCCATGCCCTTCATCTTGTTGAAGCGCGGGAAGTTCATCAGCATCGCGAA 568 Query 83576 CGAGGAGAAAAGCTGCATGCCTTCGCCGAAG--GCCGA 83611 ||| | ||| ||||| | ||| ||| |||| ||||| Sbjct 569 CGACGCGAACAGCTGGACGCCCTCGGTGAAGCCGCCGA 606 >seq12676 Length=358 Score = 105 bits (116), Expect = 1e-17 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 140357 CATGCCGCAGCCGATGTCCACGCCCACGGCCGCCGGGATGATGGCGCCCTTGGTCGGGAT 140416 ||| ||||||||||||||||| || || || ||||||||||| ||| || |||| ||||| Sbjct 298 CATCCCGCAGCCGATGTCCACCCCGACCGCGGCCGGGATGATCGCGTCCCTGGTGGGGAT 239 Query 140417 CACCGAGCCCACGGTCGAGCCGATGCCCATGTGGACGTCCGGCATCAGGGCCA 140469 || || || || |||| || |||||| ||| ||||||||||||| |||| Sbjct 238 GACGGAACCGACCGTCGCTCCCTTGCCCAGGTGCGCGTCCGGCATCAGCGCCA 186 >seq109665 Length=274 Score = 102 bits (112), Expect = 1e-16 Identities = 167/239 (70%), Gaps = 10/239 (4%) Strand=Plus/Minus Query 84746 GGGGCCACCGCCAGCTTGTGGGCGAAGCGCTCGCCCGAGCCTT------CCATGTCAGGG 84799 || || || ||||||||||| | |||||||| | ||| | || |||||| Sbjct 251 GGTGCGACGGCCAGCTTGTGCGAAAAGCGCTCCATCACGCCGTATTCAGCCGCATCAGGG 192 Query 84800 GCCTCGCCGCGCTCGGCGCCCAGGACCAGCGACGCCGCGTCGGCCTTGCGGCGCATGTGG 84859 |||| ||||| || |||| | | |||| |||||| |||| | ||| |||||| Sbjct 191 CAGGCGCCACGCTCTTCGGCCAGCAAGCGTGACGACGCGTCCGCCTGGGCGCGGATGTGG 132 Query 84860 CGGAAGATGGTCTTATTGAGCGTCTCGGCCGCCATGCTCTCGAACGGGATGTCGAGC--G 84917 ||||| || || | || | || ||| | |||||||||||| | |||| | Sbjct 131 CGGAACATCTTCATGTTCCACACCTTGGCGATCGCGCTCTCGAACGGCAC--CGAGTTGG 74 Query 84918 ACTGGAGCAGCGAGTGGAAGCCCAGCAGGCCCAGGCCCACCGAGCGCTCGCGCACGGCG 84976 ||| || | |||||||||||||| || ||||||||||||||| |||||||| ||||| Sbjct 73 CCTGCAGGAACGAGTGGAAGCCCATCACGCCCAGGCCCACCGACCGCTCGCGGGCGGCG 15 >seq84152 Length=5826 Score = 98.7 bits (108), Expect = 1e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 140342 GGTGCGCACGGCCATCATGCCGCAGCCGATGTCCACGCCCACGGCCGCCGGGATGATGGC 140401 ||| || ||||| ||||||||||| |||||||| || || || || |||||||||| ||| Sbjct 4591 GGTCCGGACGGCGATCATGCCGCACCCGATGTCGACCCCGACCGCGGCCGGGATGACGGC 4532 Query 140402 GCCCTTGGTCGGGATCACCGAGCCCACGGTCGAGCCGATGCCCATGTGGACGTCCGGCAT 140461 | | |||||||| || | || || | || || |||| ||| | |||||||| Sbjct 4531 GTCGACCGTCGGGATGACGGTACCGACCGCGGATCCCTTGCCGTAGTGCGCATCCGGCAT 4472 Query 140462 CAGGGCCACATGCGAGTGGATGAACGGCAGGGCGGCG 140498 || ||||| |||| ||| | ||| ||||| || ||| Sbjct 4471 CAACGCCACGTGCGGGTGCACGAAGGGCAGCGCTGCG 4435 Score = 95.1 bits (104), Expect = 2e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 140018 GTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGGTCCTCGTCGAG 140077 ||||||||| || ||||| || ||||| || | || ||| || || | | ||||||||| Sbjct 4835 GTTGCCGACACCCCGCGAACCGGAGTGCAGGAACATCCACACCCGATCGGACTCGTCGAG 4776 Query 140078 GCAGACCTCGATGAAGTGGTTGCCGCCGCCCAGCG 140112 ||| | |||||||||||||||||||||||| |||| Sbjct 4775 GCACAGCTCGATGAAGTGGTTGCCGCCGCCGAGCG 4741 >seq103797 Length=816 Score = 91.5 bits (100), Expect = 2e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 83276 CCGGCGGTCGGCGATGTAGCGGATGTACTTCTTGGTGTCCTCGGGCGTGACGCCGTCGAC 83335 ||| | |||||||||||||||||||||||||||| | |||| |||||| | ||||| ||| Sbjct 4 CCGCCAGTCGGCGATGTAGCGGATGTACTTCTTGATCTCCTTGGGCGTCATGCCGTTGAC 63 Query 83336 CTCGCCCAGGGCGAAGGCTTGGTCGATGAA 83365 | ||||| |||| || |||||||||| Sbjct 64 CGGGCCCATCTCGAACGCGAGGTCGATGAA 93 >seq109666 Length=1299 Score = 89.7 bits (98), Expect = 7e-13 Identities = 283/427 (66%), Gaps = 24/427 (6%) Strand=Plus/Plus Query 86188 GATGTAGGGCTCGCCCGTCTGCACGCGCGTCTCGATCAGCAGGCG---CCACAGGTCGCG 86244 |||||||||||||||| || || ||||| || |||||||||| |||||| | || Sbjct 879 GATGTAGGGCTCGCCCTGCTCCATGCGCG---CGGTCAGCAGGCGGATCCACAGCCCACG 935 Query 86245 CGCCCGTTCCATGCGGATCACCTCGCCCGTCTTG-GGCGAGCGCAGGGCGAAGTCGGTGT 86303 ||| || ||||||| | | || |||| || || ||| || | || | Sbjct 936 TGCCGAAACCTTGCGGAT-ATGGCTGCCATCTTTCGGAGAAACCAGCGCCCACTCC---T 991 Query 86304 CGTCGCGC---ACCGCGATCATGAACTCGTCGGTGACGTTGACCGCATTGTGCAGGTTGG 86360 |||||||| || ||| ||||||| | || | || || ||| |||||||||| Sbjct 992 CGTCGCGCTCGACGGCGCGCATGAACGCATCCGACACCAGCACGCCATGGTGCAGGTTGA 1051 Query 86361 TGATCTTGCGGTTGTGGTC-CCCGCCCGTCGGCTTGCGCGCGGTGATGAACTCGCGGATT 86419 |||||||||| ||| |||| || ||| |||| ||||||||| ||| Sbjct 1052 GCGCCTTGCGGTTGAAGTCGCCCGAGGGTGGGCG-GCGCATCTCGATGAACTCCTCGATC 1110 Query 86420 TCGGGGTGGTGGATGTCCAGGTAGACGGCGTTGGAGCCCCGGCGCGTACCG--CCCTGGC 86477 ||||| || ||| |||||| || || || || |||||| | || ||||| | Sbjct 1111 TCGGGATGCCAGATCGGCAGGTACACCGCCGCCGACCCACGGCGC--AGCGAACCCTGAC 1168 Query 86478 TGACGGCCAGGATCAGGCGGTCGTCCACCGCCATGAACGGGATGACGCCGGTCGACT--G 86535 ||| ||||| | |||| ||| ||| ||||||||||| ||||| | || || Sbjct 1169 TGATCGCCAGCGTGAGGCTGTCCATCACGCGGATGAACGGGATCACGCCCGACGTCTTGC 1228 Query 86536 CGAACCCTTGGAGGTCTTCTCGCCCAGGCCGCGCAGGGCGCCGTAATAGGAGCCGATGCC 86595 ||| | | | | |||||||| | |||||| ||| | || ||||||||||| Sbjct 1229 CGATCAC--GCCGACTTTCTCGCCGATCGAGCGCAGATTGCCCCAGTACGAGCCGATGCC 1286 Query 86596 GCCGCCC 86602 ||||||| Sbjct 1287 GCCGCCC 1293 >seq179873 Length=236 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 83282 GTCGGCGATGTAGCGGATGTACTTCTTGGTGTCCTCGGGCGTGACGCCGTCGACCTCGCC 83341 |||||||||||||||||||||||||||| | |||| |||| | | || |||||| ||| Sbjct 10 GTCGGCGATGTAGCGGATGTACTTCTTGATATCCTTGGGCTTCATCCCCTCGACCGGGCC 69 Query 83342 CAGGGCGAAGGCTTGGTCGATGAAGGCGTCTTCCAG 83377 || |||| || |||||||||| ||| ||||| Sbjct 70 CATCTCGAACGCGAGGTCGATGAAATTGTCCTCCAG 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 713296882982400