Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq50670 127 3e-24 seq273731 116 5e-21 seq103796 107 3e-18 seq84152 87.8 3e-12 >seq50670 Length=586 Score = 127 bits (140), Expect = 3e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 84597 CGACGATCGACTTCCAGACCGCCTCGGTGTCCAGGCCCAGTTCGCCCAGGCGCTTCTTCA 84656 ||| |||||| |||||||| || ||| ||| | | | |||| ||| ||| | | Sbjct 311 CGAGGATCGAGTTCCAGACGGCATCGCTGTTCTTGGACTTCTCGCTCAGCATCTTTTCGA 370 Query 84657 GCCAGCGGTTCTTGACGGCGAACGAGCCCGACAGGGTCTTGTGCAGGAAGGTGTTGGCCG 84716 | | ||||||||| | ||| ||||||||| ||||||||| | || ||||||||| Sbjct 371 GATACGGGTTCTTGATCGAGAAGCTGCCCGACAGCGTCTTGTGCGTGTAGATGTTGGCCG 430 Query 84717 GGATCGGCTCGATCGACGGCGAGGTGCCCCCGCAGAGGATCGAGGACGAGGCGTTGGGCG 84776 ||||||||||||| ||| ||||||| ||||||| ||||||| ||| ||| | |||| Sbjct 431 GGATCGGCTCGATGCACGCGCAGGTGCCGCCGCAGATGATCGAGATCGACGCGGTCGGCG 490 Query 84777 CCACGGCCAGCTTGTGGGCGAACCGCTC 84804 | | |||| |||| | ||||||||| Sbjct 491 CGATCGCCATCTTGCAGCTGAACCGCTC 518 >seq273731 Length=579 Score = 116 bits (128), Expect = 5e-21 Identities = 247/363 (68%), Gaps = 8/363 (2%) Strand=Plus/Plus Query 83696 CATGTACTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGACCTC 83755 |||||| |||| ||| || |||| ||| ||| ||||||||||| | | ||||| || Sbjct 27 CATGTAGTCGTACTTGTCCTTCATCTCCTTGTATTCGAGGAAGGCCGAGTATTCGACTTC 86 Query 83756 GGGCAGGCCCAGGGTGTCGATCAG-CGTCGAGTAGGCGTCGATGTGGTTGGCCTCGGCGG 83814 ||||| ||| | || |||| || | | | || || |||||||| | | |||| | Sbjct 87 GGGCATGCCGATCGTATCGAGAAGATGGCTA-TACGCCGCGATGTGGATCGTCTCGATGT 145 Query 83815 CGATGAACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAGCGCGGGCCGTACTTCT 83874 | ||||||| |||||||||| ||||||| | | | ||| | ||| ||| | || Sbjct 146 TGGAGAACGCGGACAGCATCATCAGCACTTCGGTGGGTTTGAACACCTGGCTGTAGTGCT 205 Query 83875 CGAAGTAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTGCGTCA 83934 | ||||| | ||| |||||||| | ||| |||||||| ||||||| ||||| | Sbjct 206 TCATGTAGCAGTTGTTCACCTCGACGTCCGACTGCGTGAAGAAACGGAAGATCTGCGTGA 265 Query 83935 GCAGGGACTTCTCGTCCG---GCGTCAGCTTCTCGTTCCAGTCCTGGATGTCCTGGTCCA 83991 || || | | | |||| | |||| || || |||||||| || ||| | | | | Sbjct 266 CCA--GATTGCGC-TCCGAGTCTGACAGCGTCCGGTGCCAGTCCTTGACGTCATCGGCGA 322 Query 83992 TGGGGGCTTCGTGCGGAAGCCAGTGCATGGCCTGCATGGTCTTGTAGGCCTCATAGGCCC 84051 || | || | ||| |||||||||| ||| || | ||||||| ||||||| Sbjct 323 GCGGCACCTCTTCCGGCAGCCAGTGCACACGTTGCTGCGTGTACCAGGCCTCGTAGGCCC 382 Query 84052 AGG 84054 ||| Sbjct 383 AGG 385 >seq103796 Length=610 Score = 107 bits (118), Expect = 3e-18 Identities = 195/282 (69%), Gaps = 5/282 (2%) Strand=Plus/Plus Query 83359 TGTCCGGGGCGATCGCGAAGGCCTGATCGATGAACGCGTCTTCGAGGTCGACCATGGCGC 83418 || ||||| | ||| ||||||| | |||||||| ||| |||||| || | | | Sbjct 328 TGACCGGGCCCATCTCGAAGGCGAGGTCGATGAAATTGTCCTCGAGGCGGATCGTCGTCT 387 Query 83419 GGCAGGCGTCATAGATGCGCTTCTTGGTCTCGTCGTTCCAGGAGCGCGGGTGCTCCTTGA 83478 ||||| |||| |||| | |||| | | | | || ||| | | || |||||| Sbjct 388 GGCAGACGTCGGCGATGTCGTCCTTGACCGCCTTGGTC-AGG--CACTGGCGCTCCTGAC 444 Query 83479 TCAACTCGTGCAGGAGCTTGATCATCGACTCCACGTGATGGCTCTCGTCGCGGATCGACC 83538 || ||| | | |||||| || ||| ||| ||||||||||||||||||||| Sbjct 445 AGAAGGTGTGGAACATCTTGATGATGCCCTCGCAGTGCAGGCTCTCGTCGCGGATCGACC 504 Query 83539 ACTCGACGATCGTGGTCATGCCCTTCATGCGGTTGCGGCGCTGGAAGGACATCAGCAGGG 83598 | ||||||| | |||||||||||| |||| |||| ||||| |||||||| | Sbjct 505 AGGTGACGATCTGGCCCATGCCCTTCATCTTGTTGAAGCGCGGGAAGTTCATCAGCATCG 564 Query 83599 CGAAGGACGAGAAAAGCTGCATCCCCTCGCCGAAG--GCCGA 83638 |||| |||| ||| ||||| | |||||| |||| ||||| Sbjct 565 CGAACGACGCGAACAGCTGGACGCCCTCGGTGAAGCCGCCGA 606 Score = 86.0 bits (94), Expect = 9e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 83112 TACTCCGTCGAGCGCTGCTCGAAGAAGTTGGTGTGGGTCGGGGC-GTTCATGATCCAGTC 83170 || || |||| |||||| ||||||||||||| ||| ||| || ||||| ||| | Sbjct 153 TATTCGGTCGCGCGCTGTTCGAAGAAGTTGGCGTGC-TCGACGCCGTTCAGCATCGGCGC 211 Query 83171 GAGCCAGTCGAACGGATTGTCCTTGACGCCGTAGTTGGGCTTCAGGCCCAGTTGCAGCAG 83230 |||||| | ||| | || | || |||| | ||||||||||| || || || Sbjct 212 GAGCCACGGCAGCGGGTGCTCGTCGATCATGTAGATCGGCTTCAGGCCGAGCTGGGTCAT 271 Query 83231 CCGGCGGTCGGCGATGTAGCGGATGTACTGCTTGGTGTCCTCGGGCGTGACGCC 83284 || | |||||||||| |||||||||||| |||| | |||| ||| || | ||| Sbjct 272 GCGCCAGTCGGCGATGAAGCGGATGTACTTCTTGATCTCCTTGGGGGTCATGCC 325 >seq84152 Length=5826 Score = 87.8 bits (96), Expect = 3e-12 Identities = 379/579 (65%), Gaps = 48/579 (8%) Strand=Plus/Minus Query 137383 CTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCA--GAACGAG 137440 |||||||| || ||| || | | || ||||||||||||| ||| || || || Sbjct 5300 CTTGGCCTCGGCCCGTGAGAACCGACGCCCCGCGCCGTGCGGCGCCGAACACAGACCG-- 5243 Query 137441 TCCGCATTG-CCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGAT 137499 |||| || ||||||||| ||||||||||||| | |||||||||||| |||||||| Sbjct 5242 -CCGCCGTGTCCCTTGCCGGTCACGATGTAGGACCGCGTCCCCATCGAGCCCGGGATGAT 5184 Query 137500 --CCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCG 137557 |||| || ||| ||||| | ||| ||||||||||||| | || || | Sbjct 5183 GCCCCGCACAC--CCTCGTGCGCGTCGATCGCACCCTTGCGGGTCAGCCACACGTCCTTG 5126 Query 137558 TCGAAGTGGAATTCCTTCT-GGAC---GTAGTTGTGGTGGCAGTTCA-CCGCTTCCTTGT 137612 || ||| || ||| |||| ||||||||||||| ||| | |||| || | | Sbjct 5125 CCGCCGTG----TCGCTCTCGGACGGTGTAGTTGTGGTGGGTGTTGATCCGC-TCGGTCT 5071 Query 137613 CCGTCTTGAACGG-----CGGCAGGCCCGAC---GCCCGC-ATGGCCTCCAGGACCCGGA 137663 | || | ||| || | | || || | ||| | |||| | ||| || Sbjct 5070 CGAGCTCGGCCGGGTCACCGTCGTGACCTACCCAGTGCGCGAACGCCTGCCGGAAGCGAT 5011 Query 137664 CCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCC--AC 137721 |||||||| ||||||| ||||||| ||| |||| || | | | || | Sbjct 5010 CCATCATCTCAGCGCGGTTCTCGAGCGCGAACCGCTGTGCCCA--CGCCAGATCCCGGAG 4953 Query 137722 GTAGTCGTGGAACTCCGGC-TCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCC---AGCG 137777 ||| | | || ||||||| || | || || | || |||||| || | ||| Sbjct 4952 GTACACCTCGAGCTCCGGCGTCTCGGACG-GCAGGTACGCGAGGTCCGGGTTCGGGAGCA 4894 Query 137778 GCTTGCGCC-CGTCACGGCGCAGCATCATCTCCTTGGCCTTCTCGATGAAGATGCGGC-C 137835 || ||| | || ||| || || || || || ||||| | || || | Sbjct 4893 CGATGTGCCACTTCCTGGC-------CAGCTTCTGCGCGATCGCGATG-TGTCGCTGCGC 4842 Query 137836 GATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGATCCTC 137895 ||| ||||||||| || ||||| || ||||| || | || ||| || || | ||| Sbjct 4841 GATCCGGTTGCCGACACCCCGCGAACCGGAGTGCAGGAACATCCACACCCGATCGGACTC 4782 Query 137896 GTCGAGGCAGACCTCGATGAAGTGGTTGCCGCCGCCCAG 137934 ||||||||| | |||||||||||||||||||||||| || Sbjct 4781 GTCGAGGCACAGCTCGATGAAGTGGTTGCCGCCGCCGAG 4743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 707263452623840