Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_019411.1
Length=219216
Score E
Sequences producing significant alignments: (Bits) Value
seq50670 123 3e-23
seq273731 105 9e-18
seq103796 104 3e-17
seq84152 91.5 2e-13
>seq50670
Length=586
Score = 123 bits (136), Expect = 3e-23
Identities = 152/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 83754 CGACGATCGACTTCCAGACCGCCTCGGTGTCCAGGCCCAGTTCGCCCAGGCGCTTCTTCA 83813
||| |||||| |||||||| || ||| ||| | | | |||| ||| ||| | |
Sbjct 311 CGAGGATCGAGTTCCAGACGGCATCGCTGTTCTTGGACTTCTCGCTCAGCATCTTTTCGA 370
Query 83814 GCCAGCGGTTCTTGACGGCGAACGAGCCCGACAGGGTCTTGTGCAGGAAGGTGTTGGCCG 83873
| | ||||||||| | ||| ||||||||| ||||||||| | || |||||||||
Sbjct 371 GATACGGGTTCTTGATCGAGAAGCTGCCCGACAGCGTCTTGTGCGTGTAGATGTTGGCCG 430
Query 83874 GGATCGGCTCGATCGACGGCGAGGTGCCCCCGCAAAGGATCGAGGACGAGGCGTTGGGCG 83933
||||||||||||| ||| ||||||| ||||| | ||||||| ||| ||| | ||||
Sbjct 431 GGATCGGCTCGATGCACGCGCAGGTGCCGCCGCAGATGATCGAGATCGACGCGGTCGGCG 490
Query 83934 CCACGGCCAGCTTGTGGGCGAACCGCTC 83961
| | |||| |||| | |||||||||
Sbjct 491 CGATCGCCATCTTGCAGCTGAACCGCTC 518
>seq273731
Length=579
Score = 105 bits (116), Expect = 9e-18
Identities = 223/327 (68%), Gaps = 8/327 (2%)
Strand=Plus/Plus
Query 82853 CATGTACTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGACCTC 82912
|||||| |||| ||| || |||| ||| ||| ||||||||||| | | ||||| ||
Sbjct 27 CATGTAGTCGTACTTGTCCTTCATCTCCTTGTATTCGAGGAAGGCCGAGTATTCGACTTC 86
Query 82913 GGGCAGGCCCAGGGTGTCGATCAG-CGTCGAGTAGGCGTCGATATGGTTGGCCTCGGCGG 82971
||||| ||| | || |||| || | | | || || |||| ||| | | |||| |
Sbjct 87 GGGCATGCCGATCGTATCGAGAAGATGGCTA-TACGCCGCGATGTGGATCGTCTCGATGT 145
Query 82972 CGATGAACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAGCGCGGGCCGTACTTCT 83031
| ||||||| |||||||||| ||||||| | | | ||| | ||| ||| | ||
Sbjct 146 TGGAGAACGCGGACAGCATCATCAGCACTTCGGTGGGTTTGAACACCTGGCTGTAGTGCT 205
Query 83032 CGAAGTAGCCGCGCGCCACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTGCGTCA 83091
| ||||| | ||| |||||||| | ||| |||||||| ||||||| ||||| |
Sbjct 206 TCATGTAGCAGTTGTTCACCTCGACGTCCGACTGCGTGAAGAAACGGAAGATCTGCGTGA 265
Query 83092 GCAGGGACTTCTCGTCCG---GCGTCAGCTTCTCGTTCCAGTCCTGGATGTCCTGGTCCA 83148
|| || | | | |||| | |||| || || |||||||| || ||| | | | |
Sbjct 266 CCA--GATTGCGC-TCCGAGTCTGACAGCGTCCGGTGCCAGTCCTTGACGTCATCGGCGA 322
Query 83149 TGGGGGCTTCGTGCGGAAGCCAGTGCA 83175
|| | || | ||| ||||||||||
Sbjct 323 GCGGCACCTCTTCCGGCAGCCAGTGCA 349
>seq103796
Length=610
Score = 104 bits (114), Expect = 3e-17
Identities = 185/268 (69%), Gaps = 3/268 (1%)
Strand=Plus/Plus
Query 82516 TGTCCGGGGCGATCGCGAAGGCCTGATCGATGAACGCATCTTCGAGGTCGACCATGGCGC 82575
|| ||||| | ||| ||||||| | |||||||| || |||||| || | | |
Sbjct 328 TGACCGGGCCCATCTCGAAGGCGAGGTCGATGAAATTGTCCTCGAGGCGGATCGTCGTCT 387
Query 82576 GGCAGGCGTCGTAGATGCGCTTCTTGGTCTCGTCGTTCCAGGCGCGCGGGTGCTCCTTGA 82635
||||| ||||| |||| | |||| | | | | || |||| | || ||||||
Sbjct 388 GGCAGACGTCGGCGATGTCGTCCTTGACCGCCTTGGTC-AGGCACT--GGCGCTCCTGAC 444
Query 82636 TCAACTCGTGCAGGAGCTTGATCATCGACTCCACGTGGTGGCTCTCGTCGCGGATCGACC 82695
|| ||| | | |||||| || ||| ||| |||||||||||||||||||||
Sbjct 445 AGAAGGTGTGGAACATCTTGATGATGCCCTCGCAGTGCAGGCTCTCGTCGCGGATCGACC 504
Query 82696 ACTCGACGATCGTGGTCATGCCCTTCATGCGGTTGCGGCGCTGGAAGGACATCAGCAGGG 82755
| ||||||| | |||||||||||| |||| |||| ||||| |||||||| |
Sbjct 505 AGGTGACGATCTGGCCCATGCCCTTCATCTTGTTGAAGCGCGGGAAGTTCATCAGCATCG 564
Query 82756 CGAAGGACGAGAAAAGCTGCATCCCCTC 82783
|||| |||| ||| ||||| | |||||
Sbjct 565 CGAACGACGCGAACAGCTGGACGCCCTC 592
Score = 86.0 bits (94), Expect = 9e-12
Identities = 125/174 (72%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 82269 TACTCCGTCGAGCGCTGCTCGAAGAAGTTGGTGTGGGTCGGGGC-GTTCATGATCCAGTC 82327
|| || |||| |||||| ||||||||||||| ||| ||| || ||||| ||| |
Sbjct 153 TATTCGGTCGCGCGCTGTTCGAAGAAGTTGGCGTGC-TCGACGCCGTTCAGCATCGGCGC 211
Query 82328 GAGCCAGTCGAACGGATTGTCCTTGACGCCGTAGTTGGGCTTCAGGCCCAGTTGCAGCAG 82387
|||||| | ||| | || | || |||| | ||||||||||| || || ||
Sbjct 212 GAGCCACGGCAGCGGGTGCTCGTCGATCATGTAGATCGGCTTCAGGCCGAGCTGGGTCAT 271
Query 82388 CCGGCGGTCGGCGATGTAGCGGATGTACTGCTTGGTGTCCTCGGGCGTGACGCC 82441
|| | |||||||||| |||||||||||| |||| | |||| ||| || | |||
Sbjct 272 GCGCCAGTCGGCGATGAAGCGGATGTACTTCTTGATCTCCTTGGGGGTCATGCC 325
>seq84152
Length=5826
Score = 91.5 bits (100), Expect = 2e-13
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 136606 GTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGGTCCTCGTCGAG 136665
||||||||| || ||||| || ||||| || | || ||| || || | | |||||||||
Sbjct 4835 GTTGCCGACACCCCGCGAACCGGAGTGCAGGAACATCCACACCCGATCGGACTCGTCGAG 4776
Query 136666 GCAGACCTCGATGAAGTGGTTGCCGCCGCCCAG 136698
||| | |||||||||||||||||||||||| ||
Sbjct 4775 GCACAGCTCGATGAAGTGGTTGCCGCCGCCGAG 4743
Score = 84.2 bits (92), Expect = 3e-11
Identities = 120/165 (73%), Gaps = 8/165 (5%)
Strand=Plus/Minus
Query 136147 CTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCA--GAACGAG 136204
|||||||| || ||| || | | || ||||||||||||| ||| || || ||
Sbjct 5300 CTTGGCCTCGGCCCGTGAGAACCGACGCCCCGCGCCGTGCGGCGCCGAACACAGACCGCC 5241
Query 136205 TCCGCGTTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGAT- 136263
||| || ||||||||| ||||||||||||| | |||||||||||| ||||||||
Sbjct 5240 GCCGTGT--CCCTTGCCGGTCACGATGTAGGACCGCGTCCCCATCGAGCCCGGGATGATG 5183
Query 136264 -CCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCA 136307
|||| || ||| ||||| | ||| |||||||||||||
Sbjct 5182 CCCCGCACAC--CCTCGTGCGCGTCGATCGCACCCTTGCGGGTCA 5140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 698934002255680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |