Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_019414.1
Length=51071
Score E
Sequences producing significant alignments: (Bits) Value
seq42003 273 7e-69
seq4597 129 2e-25
>seq42003
Length=910
Score = 273 bits (302), Expect = 7e-69
Identities = 421/587 (72%), Gaps = 19/587 (3%)
Strand=Plus/Plus
Query 39259 TCACGGGGCCACCCGGCC--CTGCTTGTTGAAGGCGGTGTACGTGATGGGCATCAGGTCC 39316
||| ||||| || ||||| | || || |||||| | || |||| ||||| ||| |
Sbjct 122 TCAGGGGGCGACGCGGCCGCCGGCCTG--GAAGGCCGCGTGGGTGAGCGGCATGAGGGGC 179
Query 39317 -GCGAGGTGGTCCTCCATCTTCTCGGCGACCATCTCGATCTCGCGCTGCGGGAAGGAGGG 39375
|| | | ||||||||| ||||||| ||||||||||||||||||||||||| |||||
Sbjct 180 TGCCAAAGCG-CCTCCATCTGCTCGGCGGCCATCTCGATCTCGCGCTGCGGGAAAGAGGG 238
Query 39376 GAACTGAGCGA--TGGCACTGATGGTGCGGAGTCCGAGGAAGTGCATCAGGCTGCGCGCG 39433
||| || | | | | || | ||||| || |||||||| ||| || |||||||
Sbjct 239 GAAGTGCGAGTCCTCGTGCT--TCGTGCGCAGCGAGAGGAAGTTCATGAGCGAGCGCGCG 296
Query 39434 TTGCAGGTGGCGTAGAAGCTGGTGAAGATCCCGACCGGGAGGACCATGCGGGCCACCTCG 39493
|| ||| |||| | || | ||||| ||||| || || |||||| ||||||
Sbjct 297 TTCACGGTCACGTACATCGAGGAGTAGATCGACACCGGCAGCACGGCGCGGGCGACCTCG 356
Query 39494 CGGGCGATGCCGATCTCCAGCATCACCTCGTAGGAGCGGTACGCCT-GCTCGT-ACGCGT 39551
||||| | ||| || ||||| | |||| ||| |||| ||||| |||||
Sbjct 357 CGGGCCACACCGGCGTCGAGCATGCGCAGGTAGCTCGCGTAGGCCTCGCTCGCGACGCGG 416
Query 39552 CA-CTCATGGCGGAGAGCGTCACCGCGTACTGCGAGGGCGAGCCGGGCGTGAACTGGTAG 39610
| ||| |||| || || | ||| |||| ||| | ||| ||| ||||
Sbjct 417 CGGCTCTCGGCGACGA-CG--AGTTCGTGCTGCTCGGGGGTGCCCTCTTCGAAGACGTAG 473
Query 39611 GCGCCGGGCTTGCCCTTCTGCACCAGGTTCCGCTCATGGCCGGGGGCGTAGAAGACGGGG 39670
|||||||||||||| |||||| || ||||| ||||||| |||||||||||||
Sbjct 474 GCGCCGGGCTTGCCGACCTGCACGAGACGGCGCTCGGGGCCGGGCACGTAGAAGACGGGA 533
Query 39671 CGGAGCTGCTTGTAGCGGCCCGACTCCTCGTTGTACGACCAGCCCGAGCGGTGGCGGAAG 39730
|| ||||| |||||| || |||||||||||| || | | |||||| || | |
Sbjct 534 CGCAGCTGACGGTAGCGCCCGCTCTCCTCGTTGTAGGA---GGCGATGCGGTGCCGCATG 590
Query 39731 AACTCGCGGGCCACGAAGACCGGCGCCTCGACGTAGAAGGTGAACGTGGTGTGCTCGAAG 39790
||||||||| ||||||| |||||||| ||||||||||||| || | |||||||||||
Sbjct 591 AACTCGCGGAAGACGAAGATCGGCGCCTGCACGTAGAAGGTGAGCGAGTTGTGCTCGAAG 650
Query 39791 GGGCTGCCGTGCCGGTCCCGCATCAGGTAGTTGATCAGGCCCTGGTC 39837
|| |||||| ||||| ||||||||||||||||| ||||||| |||
Sbjct 651 GGCGAGCCGTGGCGGTCGCGCATCAGGTAGTTGATGAGGCCCTTGTC 697
>seq4597
Length=157418
Score = 129 bits (142), Expect = 2e-25
Identities = 140/186 (75%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 34182 CACCTGACCCCGGTCGAGGCGATGGAGATCGACCACGCCATCGCGGAGTGCGTGGTGTCG 34241
||||||||| ||||||| ||| |||||||||||| |||||||| | ||| || |
Sbjct 124606 CACCTGACCGGCATCGAGGCCATGCAGATCGACCACGACATCGCGGCATCCGTCGTCGCA 124547
Query 34242 GGCGGTGTCCGGCGCTCTGCCCGTATGGCCATCTGCAAGTGGGACGACCCGTTCATCGAC 34301
|| |||| || || || || |||||||| || |||||||||||| || |
Sbjct 124546 GGTGGTGCACGTCGGTCCGCGCGTATGGCAATGATGGTCTGGGACGACCCGGAAGTCTTC 124487
Query 34302 GACTTCCTCGACTGCAAGGCGGACGGCTCGAAGCACTGGACGACGAACATCTCCGTCGAG 34361
|||||| || |||||||||| ||| | || | |||||||| ||||||||||||||||||
Sbjct 124486 GACTTCATCAACTGCAAGGCCGACTGGTCCACTCACTGGACCACGAACATCTCCGTCGAG 124427
Query 34362 ATCGAC 34367
| |||
Sbjct 124426 GTAGAC 124421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 162768265683918
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |