Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq170880 154 3e-32 seq275772 116 7e-21 seq8054 113 8e-20 seq200937 102 2e-16 seq266287 93.3 8e-14 >seq170880 Length=1133 Score = 154 bits (170), Expect = 3e-32 Identities = 350/521 (67%), Gaps = 9/521 (2%) Strand=Plus/Minus Query 213888 TTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCA 213947 || ||||| ||||| || || |||||||||| | |||||||||||| | ||||||||| Sbjct 1112 TTCTTGCGGAGATCGAGCCAGGCAAAGATGTCGGGGTGCCACGGCTCAAGGTAGATGGCG 1053 Query 213948 AAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATG 214004 || || ||||| | |||| || |||||||| || | ||| ||||||||| | Sbjct 1052 AACGCACCCGGGCGCTTGTTCCCACCCTGGTCGACATAGCGGGCAGTGTTGTTGAAGACG 993 Query 214005 CGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAG 214064 || || | ||| || | ||||| || | |||||| || || | || || |||||| Sbjct 992 CGGAGCATGGGCACGATGCCGTTCGAGTATCCGTTTGTGCCACCGATGTAGCTTCCGGAG 933 Query 214065 GCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAG 214124 || | | |||| ||| ||| || || || |||||| |||||||||||||||||| Sbjct 932 GCACGGATGTTGTGAATGTGGAGGCCGATACCGCCGGCGGTCTTGGAGATCATGGCGCAC 873 Query 214125 CGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAG 214184 | ||| || || |||||| | || ||| || | | || | |||||| Sbjct 872 GTCTTCAGGGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATCGCCACGAGGAAGCAA 813 Query 214185 CTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATA 214244 || |||||||| || || ||||| ||||| || ||||| ||||||| | | Sbjct 812 GACGCAAGCTGGGGGTGGGGCGTGCCAGCATTGAAGAGGGTGGGCGAGGCATGGGTGAAG 753 Query 214245 AACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATC 214304 |||| | || | | |||| ||||| | | | || || || |||||| Sbjct 752 TACTTTTCGGACATGTAGTTGTACGTCTCGATCGCACGCGTGACGTTGTTGCCGTGGATG 693 Query 214305 TGTAGAGCGCACCTCATCAGCATGTGCTG-GGGC-CTC-TCTATGGGTCCTTTGGGGCCC 214361 | |||| | ||| ||||||||||| |||| ||| | | | | || | | || Sbjct 692 CCGATAGCGACGCGCATGAGCATGTGCTGCGGGCGCTCGGCGACGCGGCCGTCGATGC-- 635 Query 214362 TTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 ||| |||||||| ||||| || |||||||| |||||||| Sbjct 634 -GGAGAAGGTAGGACCGCTCAAGGGTCTTGAAGCCAAAGTA 595 >seq275772 Length=427 Score = 116 bits (128), Expect = 7e-21 Identities = 240/355 (68%), Gaps = 8/355 (2%) Strand=Plus/Plus Query 213204 GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCC 213263 || |||| || || ||| ||||| ||| ||||| |||| ||||||||| ||| Sbjct 55 GATGCCTCGAGTGCGCCGTGGTAGAGGGTCTCAAAGATCTGGAGGTTGAGCTTGCGCGCC 114 Query 213264 TCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323 || || || ||||| | | | | ||||| |||| || || |||||||| ||| Sbjct 115 TCCGGCGAGTCAAAGGGGAGCCGGAGGATCTGGAAAGCATCGGCAAGACCCTGGACACCG 174 Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTT 213382 |||||||| || | ||| | || ||| |||||| | || ||| || |||||| | || Sbjct 175 ATGCCGATCGGGCGGTGACGCATGTTCGACTTGCGCGC-CTCGGGCACAGGGTAATAATT 233 Query 213383 GCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTC 213442 ||||||||| || || ||| |||| | ||||||| ||| | | ||| | ||| Sbjct 234 AACGTCGATGATGCGATTAAGATTGTAGGTGACAACTTTGGCGACCTCGTGCAGCTTCTC 293 Query 213443 GTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTT 213502 ||| || | |||||||| | ||| |||||| ||||| || ||||| Sbjct 294 AAAGTTGTACTTG------CCGTCCTGGATAAAGGTAGGCAGCGCGATCGACGCAAGGTT 347 Query 213503 GCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTG 213557 ||| ||||| || || | | | | | |||||| | ||||| |||||||| ||| Sbjct 348 GCAGACGGCAACTTCGTCGGGGGCCGAGTACTCGAGAATCTCTGTGCACAGATTG 402 >seq8054 Length=7085 Score = 113 bits (124), Expect = 8e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 241471 CAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTC 241530 |||| | ||||| || ||| |||| |||||| |||||||||||| | |||||| || Sbjct 5048 CAGTTCAGCGTTCTCGCCCTTCAGCAGCTTCACCTTCTCCTCCAGCTTTGAGATGCGCTC 5107 Query 241531 CAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGC 241590 ||||||||||| ||||| |||| ||| |||| |||||||| | | ||| || ||| Sbjct 5108 GAGTTTGCGCCGCCGGCACTTGGAGGCAGCCACTCGGTTCCGCTGCCGCTTGCGCTCCAG 5167 Query 241591 CTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 |||||| | ||||| ||||||||||| || ||| Sbjct 5168 CTTGATCCTCTCCTGCGAGTCCATGTCGATGGGCGAC 5204 >seq200937 Length=824 Score = 102 bits (112), Expect = 2e-16 Identities = 241/359 (67%), Gaps = 19/359 (5%) Strand=Plus/Plus Query 48305 TCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATG 48364 ||||| ||||| |||||||| |||||||| || |||||| || ||||| || || Sbjct 43 TCTGAAATCCACCGGAGCGCCCACTCTGCCTTTTTGCGGATGCAGGGGATCGTGTCAATA 102 Query 48365 GCCCGGAAGAGCTTCTTGCACTCACCTGCGTC-CGCAACATAG-GTAG-TGAGCAGCTTT 48421 || ||| || | || || ||| | ||| || | || || | |||| ||| Sbjct 103 CCCTCGAACAGATGCTGGCGCTCTGTCGAGTCGCGGATGTAAGTGTCGATGAGGAGC--- 159 Query 48422 GCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCC 48481 | ||| | ||| || || | ||||| || ||||||||||||||||| | || Sbjct 160 GAGTAGACCTCGGAATGGATGTTCTCCATCATGATCTGGAACCCGTAGATT---CGGGGG 216 Query 48482 TCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCT 48541 |||| || || | ||||| | ||| ||||| ||||| ||||| || ||||| Sbjct 217 -------CCTGGACCTCGTTCGAGAAGCGCTCGAGCAGGTTCTCGTTGACGATGCCATCC 269 Query 48542 GAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCA 48601 || | ||||||||||||||||| || || | ||| | |||||||| || | || Sbjct 270 GAGGTGGCAAAGAAGGCAAGGACGTGCTTGATGAAGTAGCGCTCGTCGTCATTCAGCTTG 329 Query 48602 TT---CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657 || |||| | || | || || |||||||| || || | |||||||| ||||| Sbjct 330 TTGTCCCAGTCGTGCATATCCTTCGACAGGTCCATCTCCTCGGCCGTCCAGAACGACGC 388 >seq266287 Length=596 Score = 93.3 bits (102), Expect = 8e-14 Identities = 229/344 (67%), Gaps = 10/344 (3%) Strand=Plus/Plus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 ||| || |||||||||||||| ||||| | | | | ||| || || | ||| | | | Sbjct 152 GTTGAGCGACTGACTCTGGTCAATGAACGCGCCTCGGTCGGCAGCAAGGTCAAGAACGAC 211 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 |||| || | |||||| ||||||||| ||| | || | || | || | ||| Sbjct 212 CTTCTGAGAAATCTCCCAGACGGTCTTGTAGACGGCCTTCATGTGTGCGGGTATACCGTT 271 Query 212816 GATGTTCTGCACAGACCCCCTGTG---TATGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872 ||||||||| | || ||| ||| ||| || | | | ||| || || | ||| Sbjct 272 GATGTTCTGGATTGAGCCCTGGTGGGCAATGATCCGGTTC---TTCATCTCATCATCCCA 328 Query 212873 GAGGCC--CCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCT 212930 |||||| | | | | || ||||| ||| ||||| || |||||||| || || Sbjct 329 GAGGCCGGCATCG--ACGAGCTCCTTGAGCAGCCATGGGTTCACGATCTGGAACTCGCCG 386 Query 212931 GAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCC 212990 | | || | | | ||| | ||| || ||||| ||||| | || ||||||| || Sbjct 387 GCCAAGACGCGGCGCGTGTAGATGTTGGACGTGTACGGCTCAAAGCACTCGTTGAATCCA 446 Query 212991 AGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAG 213034 |||||||| ||||| ||||| |||||||| |||| ||||| Sbjct 447 AGAATCTGGCTGGTGCTCGCTGTCGGCATGGGCGCCAGAAGGAG 490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928306401214720