Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq170880 116 7e-21 seq275772 87.8 3e-12 seq7533 86.0 1e-11 >seq170880 Length=1133 Score = 116 bits (128), Expect = 7e-21 Identities = 344/519 (66%), Gaps = 16/519 (3%) Strand=Plus/Minus Query 222129 CAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGC 222188 |||| ||||| | |||||||||||| || |||| ||| | || || || |||||||| | Sbjct 1090 CAAAGATGTCGGGGTGCCACGGCTCAAGGTAGATGGCGAACGCACCCGGGCGCTTGTTCC 1031 Query 222189 CACCCTGATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCG 222247 ||||||| || || || ||| | |||||||| ||| || | || || | ||| Sbjct 1030 CACCCTGGTCGAC-ATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACGATGCCG 972 Query 222248 TTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT---ACTG-GC 222303 || || ||||| ||||| ||||| ||| ||| | | ||| | || | Sbjct 971 TTCGAGTATCCGTTTGTGCCACCGATGTAGCTTCCGGAGGCACGGATGTTGTGAATGTGG 912 Query 222304 AGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCAT 222363 || ||||||||| |||||| || |||||||||||||| |||| || ||||| Sbjct 911 AG----GCCGATACCGCCGGCGGTCTTGGAGATCATGGCGCACGTCTTCAGGGTGTCGTA 856 Query 222364 GATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTT 222423 ||||||||| || ||||| ||||| | || || || ||||||| | ||| | | Sbjct 855 GATGCCCTCGATCGAGTCGTCCTTCATCGCCACGAGGAAGCAAGACGCAAGCTGGGGGTG 796 Query 222424 GGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAG 222483 || | | || || || || ||||| ||| || || ||||| ||||| Sbjct 795 GGGCGTGCCAGCATTGAAGAGGGTGGGCGAGGCATGGGTGAAGTACTTTTCGGACATGTA 736 Query 222484 ATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCAT 222543 | ||||||||| | | | | || ||||| ||||| || || ||| | ||| Sbjct 735 GTTGTACGTCTCGATCGCACGCGTGACGTTGTTGCCGTGGATGCCGATAGCGACGCGCAT 676 Query 222544 GTACATGTACTG-GGGC-CTC-TCCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTT 222600 | ||||| ||| |||| ||| | || | || | | || ||||| ||||| || Sbjct 675 GAGCATGTGCTGCGGGCGCTCGGCGACGCGGCCGTCGATGC-GGAGA--AGGTAGGACCG 619 Query 222601 TTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTC 222639 || || |||||||| |||||||| ||| | |||||| Sbjct 618 CTCAAGGGTCTTGAAGCCAAAGTAATTGTAATTAAAGTC 580 >seq275772 Length=427 Score = 87.8 bits (96), Expect = 3e-12 Identities = 155/225 (69%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 221427 CGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGAAGTGA 221483 ||||||||| ||||||||||||| |||||| |||| ||||| || || | Sbjct 71 CGTGGTAGAGGGTCTCAAAGATCTGGAGGTTGAG---CTTGCGCGCCTCCGGCGAGTCAA 127 Query 221484 AGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCC 221543 |||| | || || ||||| || | ||||| || ||||| || ||||| ||||| || | Sbjct 128 AGGGGAGCCGGAGGATCTGGAAAGCATCGGCAAGACCCTGGACACCGATGCCGATCGGGC 187 Query 221544 TGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGAT 221603 ||| | | |||| || | ||| || ||||| || ||| | || |||||||| | Sbjct 188 GGTGACGCATGTTCGACTTGCGCGCCTCGGGCACAGGGTAATAATTAACGTCGATGATGC 247 Query 221604 TGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCT 221648 || || || |||| ||||| | |||||| |||||||| Sbjct 248 GATTAAGATTGTAGGTGACAACTTTGGCGACCTCGTGCAGCTTCT 292 >seq7533 Length=2710 Score = 86.0 bits (94), Expect = 1e-11 Identities = 120/164 (73%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 25576 GAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAAC 25635 ||| | |||||| ||||| | || || ||||||||||| || ||||||||||| || || Sbjct 841 GAGAAACATTTTATCAAGCATGTCTTAGCATTCTTTGCGGCTTCTGATGGTATTGTTAAT 900 Query 25636 GAGAATCTGTGCGAGAG--ATTCACCAGGGAAGTGC-AGTACGTGGAGGCCAAGTGTTTC 25692 ||||| || ||| | ||||| | || || | ||| | || |||| ||| ||| Sbjct 901 GAGAACTTGGTGGAGCGTTTTTCACAA--GAGGTTCAAGTGACT-GAAGCCAGGTGCTTC 957 Query 25693 TACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736 || ||||| || || || || |||||||| || || ||| |||| Sbjct 958 TATGGTTTTCAAATTGCTATGGAAAATGTTCATTCAGAGATGTA 1001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 925627711203520