Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq170880 116 7e-21
seq275772 87.8 3e-12
seq7533 86.0 1e-11
>seq170880
Length=1133
Score = 116 bits (128), Expect = 7e-21
Identities = 344/519 (66%), Gaps = 16/519 (3%)
Strand=Plus/Minus
Query 222129 CAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGC 222188
|||| ||||| | |||||||||||| || |||| ||| | || || || |||||||| |
Sbjct 1090 CAAAGATGTCGGGGTGCCACGGCTCAAGGTAGATGGCGAACGCACCCGGGCGCTTGTTCC 1031
Query 222189 CACCCTGATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAGTCCG 222247
||||||| || || || ||| | |||||||| ||| || | || || | |||
Sbjct 1030 CACCCTGGTCGAC-ATAGCGGGCAGTGTTGTTGAAGACGCGGAGCATGGGCACGATGCCG 972
Query 222248 TTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT---ACTG-GC 222303
|| || ||||| ||||| ||||| ||| ||| | | ||| | || |
Sbjct 971 TTCGAGTATCCGTTTGTGCCACCGATGTAGCTTCCGGAGGCACGGATGTTGTGAATGTGG 912
Query 222304 AGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCAT 222363
|| ||||||||| |||||| || |||||||||||||| |||| || |||||
Sbjct 911 AG----GCCGATACCGCCGGCGGTCTTGGAGATCATGGCGCACGTCTTCAGGGTGTCGTA 856
Query 222364 GATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTT 222423
||||||||| || ||||| ||||| | || || || ||||||| | ||| | |
Sbjct 855 GATGCCCTCGATCGAGTCGTCCTTCATCGCCACGAGGAAGCAAGACGCAAGCTGGGGGTG 796
Query 222424 GGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAG 222483
|| | | || || || || ||||| ||| || || ||||| |||||
Sbjct 795 GGGCGTGCCAGCATTGAAGAGGGTGGGCGAGGCATGGGTGAAGTACTTTTCGGACATGTA 736
Query 222484 ATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCAT 222543
| ||||||||| | | | | || ||||| ||||| || || ||| | |||
Sbjct 735 GTTGTACGTCTCGATCGCACGCGTGACGTTGTTGCCGTGGATGCCGATAGCGACGCGCAT 676
Query 222544 GTACATGTACTG-GGGC-CTC-TCCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTT 222600
| ||||| ||| |||| ||| | || | || | | || ||||| ||||| ||
Sbjct 675 GAGCATGTGCTGCGGGCGCTCGGCGACGCGGCCGTCGATGC-GGAGA--AGGTAGGACCG 619
Query 222601 TTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTC 222639
|| || |||||||| |||||||| ||| | ||||||
Sbjct 618 CTCAAGGGTCTTGAAGCCAAAGTAATTGTAATTAAAGTC 580
>seq275772
Length=427
Score = 87.8 bits (96), Expect = 3e-12
Identities = 155/225 (69%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 221427 CGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGAAGTGA 221483
||||||||| ||||||||||||| |||||| |||| ||||| || || |
Sbjct 71 CGTGGTAGAGGGTCTCAAAGATCTGGAGGTTGAG---CTTGCGCGCCTCCGGCGAGTCAA 127
Query 221484 AGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCC 221543
|||| | || || ||||| || | ||||| || ||||| || ||||| ||||| || |
Sbjct 128 AGGGGAGCCGGAGGATCTGGAAAGCATCGGCAAGACCCTGGACACCGATGCCGATCGGGC 187
Query 221544 TGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGAT 221603
||| | | |||| || | ||| || ||||| || ||| | || |||||||| |
Sbjct 188 GGTGACGCATGTTCGACTTGCGCGCCTCGGGCACAGGGTAATAATTAACGTCGATGATGC 247
Query 221604 TGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCT 221648
|| || || |||| ||||| | |||||| ||||||||
Sbjct 248 GATTAAGATTGTAGGTGACAACTTTGGCGACCTCGTGCAGCTTCT 292
>seq7533
Length=2710
Score = 86.0 bits (94), Expect = 1e-11
Identities = 120/164 (73%), Gaps = 6/164 (4%)
Strand=Plus/Plus
Query 25576 GAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAAC 25635
||| | |||||| ||||| | || || ||||||||||| || ||||||||||| || ||
Sbjct 841 GAGAAACATTTTATCAAGCATGTCTTAGCATTCTTTGCGGCTTCTGATGGTATTGTTAAT 900
Query 25636 GAGAATCTGTGCGAGAG--ATTCACCAGGGAAGTGC-AGTACGTGGAGGCCAAGTGTTTC 25692
||||| || ||| | ||||| | || || | ||| | || |||| ||| |||
Sbjct 901 GAGAACTTGGTGGAGCGTTTTTCACAA--GAGGTTCAAGTGACT-GAAGCCAGGTGCTTC 957
Query 25693 TACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736
|| ||||| || || || || |||||||| || || ||| ||||
Sbjct 958 TATGGTTTTCAAATTGCTATGGAAAATGTTCATTCAGAGATGTA 1001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 925627711203520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |