Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_019544.1
Length=49335
Score E
Sequences producing significant alignments: (Bits) Value
seq108450 102 3e-17
seq263247 100 9e-17
seq256480 86.0 2e-12
seq233512 84.2 7e-12
>seq108450
Length=476
Score = 102 bits (112), Expect = 3e-17
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45587 CATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGC 45646
|| || || | ||||| | |||||||| ||||| | | ||||| || || || |||
Sbjct 191 CAGATGCGGTNNATCATCCACGAACTGCTGTGGTTCCTGACCGGCGACACCAACGTGCGC 250
Query 45647 TATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTC 45706
| |||| || || |||||||| ||||||||||||||||| | || |||||||||
Sbjct 251 GCCCTCCAGGCCAACGGGGTGACGATCTGGGACGAGTGGGCCGACGCCAATGGCGATCTC 310
Query 45707 GGCCCAATCTACGGCGCGCAATGGCGGTCGTGGAAAGGGGCTGACGGGAAAACGGTCGAC 45766
|| || |||||||| |||||||| || ||| | | || || | ||||||
Sbjct 311 GGACCCGTCTACGGCCGCCAATGGCGCTCCTGGGCCAAGCCCGATGGCGGCAGCGTCGAC 370
Query 45767 CAAATTGCGGCGGTCTTTAAGGAAATCAAGCGCAACCCGAACTCGCGGCG 45816
|| || || |||| | | || ||| ||||||||| | ||||| ||
Sbjct 371 CAGATCGCCTGGGTCGTCGACGAGATCCGCCGCAACCCGGATTCGCGCCG 420
>seq263247
Length=570
Score = 100 bits (110), Expect = 9e-17
Identities = 171/248 (69%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 45929 CAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCTGTTG 45988
||||| || | ||| | || || || ||||||| |||||||| ||||| |||||| |
Sbjct 329 CAGCGCTCGGGCGACATCTTCCTCGGCGTGCCGTTCAACATCGCCAGCTACGCGCTGCTC 270
Query 45989 ACACATATGGTTGCCCAACAATGCGACCTCGATGTCGGCGAACTCATTTTCACCGGCGGC 46048
|| || || | || || ||||||| || || |||||||| |||| | |||||||||
Sbjct 269 ACCCACATCCTCGCGCAGCAATGCGGGCTGGAGGTCGGCGAGTTCATCTGGACCGGCGGC 210
Query 46049 GACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCG 46108
||| ||| | || || ||||| || || ||| |||| ||||| ||| |||
Sbjct 209 GACTGCCACCTCTATTCGAACCATCTCGACCAGGCGCGTTTGCAACTGACACGCTCGCCC 150
Query 46109 CGCCCGCTGCCGAAGCTCGTGATCAAACGGAAGCCGCCGTCTATCTTTGACTATGAATAC 46168
| ||||| || |||| ||| ||||||||| || ||| | || || ||
Sbjct 149 GGGCCGCTCCCACGCCTCGAAATCCTCCGGAAGCCGGACTCGATCGACGCGTACGAGTAT 90
Query 46169 GAGGATTT 46176
||||||||
Sbjct 89 GAGGATTT 82
>seq256480
Length=539
Score = 86.0 bits (94), Expect = 2e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 45593 CGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTG 45652
||||||||||| |||||||| ||||| | ||||| || ||||| |||| ||
Sbjct 183 CGCTCGATCATCGTCGAACTGCTGTGGTTCCTGCGCGGCGACACCAATGTCCGCTGGCTG 124
Query 45653 CAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCA 45712
|||||| || |||| |||||||| ||||| || || ||||||||||||||
Sbjct 123 CAGGAGCGCAAGGTCGCGATCTGGGACGAATGGGCGGACGAGGCGGGCGATCTCGGCCCG 64
Query 45713 ATCTACGGCGCGCAATGGCG 45732
|||||||| |||||||||
Sbjct 63 GTCTACGGCAAGCAATGGCG 44
>seq233512
Length=455
Score = 84.2 bits (92), Expect = 7e-12
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 45651 TGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCC 45710
|||||||| | || ||| ||| ||| |||||||||| || || |||||| |||||||
Sbjct 159 TGCAGGAGCACGGCGTGCGGATCTGGAACGAGTGGGCGGACGAGTCCGGCGACCTCGGCC 100
Query 45711 CAATCTACGGCGCGCAATGGCGGTCGTGG 45739
| ||||||||| ||| ||||||||||||
Sbjct 99 CGGTCTACGGCGTGCAGTGGCGGTCGTGG 71
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157231344295262
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |