Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq108450 102 3e-17 seq263247 100 9e-17 seq256480 86.0 2e-12 seq233512 84.2 7e-12 >seq108450 Length=476 Score = 102 bits (112), Expect = 3e-17 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45587 CATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGC 45646 || || || | ||||| | |||||||| ||||| | | ||||| || || || ||| Sbjct 191 CAGATGCGGTNNATCATCCACGAACTGCTGTGGTTCCTGACCGGCGACACCAACGTGCGC 250 Query 45647 TATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTC 45706 | |||| || || |||||||| ||||||||||||||||| | || ||||||||| Sbjct 251 GCCCTCCAGGCCAACGGGGTGACGATCTGGGACGAGTGGGCCGACGCCAATGGCGATCTC 310 Query 45707 GGCCCAATCTACGGCGCGCAATGGCGGTCGTGGAAAGGGGCTGACGGGAAAACGGTCGAC 45766 || || |||||||| |||||||| || ||| | | || || | |||||| Sbjct 311 GGACCCGTCTACGGCCGCCAATGGCGCTCCTGGGCCAAGCCCGATGGCGGCAGCGTCGAC 370 Query 45767 CAAATTGCGGCGGTCTTTAAGGAAATCAAGCGCAACCCGAACTCGCGGCG 45816 || || || |||| | | || ||| ||||||||| | ||||| || Sbjct 371 CAGATCGCCTGGGTCGTCGACGAGATCCGCCGCAACCCGGATTCGCGCCG 420 >seq263247 Length=570 Score = 100 bits (110), Expect = 9e-17 Identities = 171/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 45929 CAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCTGTTG 45988 ||||| || | ||| | || || || ||||||| |||||||| ||||| |||||| | Sbjct 329 CAGCGCTCGGGCGACATCTTCCTCGGCGTGCCGTTCAACATCGCCAGCTACGCGCTGCTC 270 Query 45989 ACACATATGGTTGCCCAACAATGCGACCTCGATGTCGGCGAACTCATTTTCACCGGCGGC 46048 || || || | || || ||||||| || || |||||||| |||| | ||||||||| Sbjct 269 ACCCACATCCTCGCGCAGCAATGCGGGCTGGAGGTCGGCGAGTTCATCTGGACCGGCGGC 210 Query 46049 GACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCG 46108 ||| ||| | || || ||||| || || ||| |||| ||||| ||| ||| Sbjct 209 GACTGCCACCTCTATTCGAACCATCTCGACCAGGCGCGTTTGCAACTGACACGCTCGCCC 150 Query 46109 CGCCCGCTGCCGAAGCTCGTGATCAAACGGAAGCCGCCGTCTATCTTTGACTATGAATAC 46168 | ||||| || |||| ||| ||||||||| || ||| | || || || Sbjct 149 GGGCCGCTCCCACGCCTCGAAATCCTCCGGAAGCCGGACTCGATCGACGCGTACGAGTAT 90 Query 46169 GAGGATTT 46176 |||||||| Sbjct 89 GAGGATTT 82 >seq256480 Length=539 Score = 86.0 bits (94), Expect = 2e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 45593 CGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTG 45652 ||||||||||| |||||||| ||||| | ||||| || ||||| |||| || Sbjct 183 CGCTCGATCATCGTCGAACTGCTGTGGTTCCTGCGCGGCGACACCAATGTCCGCTGGCTG 124 Query 45653 CAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCA 45712 |||||| || |||| |||||||| ||||| || || |||||||||||||| Sbjct 123 CAGGAGCGCAAGGTCGCGATCTGGGACGAATGGGCGGACGAGGCGGGCGATCTCGGCCCG 64 Query 45713 ATCTACGGCGCGCAATGGCG 45732 |||||||| ||||||||| Sbjct 63 GTCTACGGCAAGCAATGGCG 44 >seq233512 Length=455 Score = 84.2 bits (92), Expect = 7e-12 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 45651 TGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCC 45710 |||||||| | || ||| ||| ||| |||||||||| || || |||||| ||||||| Sbjct 159 TGCAGGAGCACGGCGTGCGGATCTGGAACGAGTGGGCGGACGAGTCCGGCGACCTCGGCC 100 Query 45711 CAATCTACGGCGCGCAATGGCGGTCGTGG 45739 | ||||||||| ||| |||||||||||| Sbjct 99 CGGTCTACGGCGTGCAGTGGCGGTCGTGG 71 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157231344295262