Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq253728 113 8e-21 seq268213 80.6 5e-11 >seq253728 Length=404 Score = 113 bits (124), Expect = 8e-21 Identities = 169/237 (71%), Gaps = 5/237 (2%) Strand=Plus/Plus Query 11168 TTTCTTGGCACCAACGTGCGCACCGCGCA-GAGCTACACCGGCAACCTGTATCTCGATGA 11226 || || ||||| ||| | ||||||||||| | || || |||||| | || |||| || Sbjct 78 TTCCTCGGCACGAACTTTCGCACCGCGCAGGGGCGGCA-CGGCAATTTCTACTTCGACGA 136 Query 11227 ATATTTCTGGATACCGAAATTCCAGGAGCTGCGAAAGGTCGCCAGCGGCATGTCGCTGCA 11286 | |||||| | | | ||| |||||||| ||||||||| || ||| || ||| Sbjct 137 GTTCTTCTGGGTTCACAGCTTCGAGGAGCTGAACAAGGTCGCCTCGGGGATGGCGACGCA 196 Query 11287 TAAAAAGTGGCGCACCACCTACTTTTCCACGCCGTCGAGCCTGTCGCACTCCGCTTATCC 11346 || |||||||| | ||||||||||| ||||| |||| | || |||| |||| ||||| Sbjct 197 CAAGAAGTGGCGAAAAACCTACTTTTCGACGCCATCGACCGTGCTGCACCCCGCCTATCC 256 Query 11347 GTTCTGGTCGGGCGAGCTGTTCAACAAAGGGCGGCGCAGCAAAGCCGATCGCATCGA 11403 | |||| | ||||||| | |||| |||| || | || | |||||| |||| Sbjct 257 ATACTGGACCGGCGAGCGGCGCAAC---CGGCGCCGAAAGAAGGAAGATCGCGTCGA 310 >seq268213 Length=253 Score = 80.6 bits (88), Expect = 5e-11 Identities = 97/130 (75%), Gaps = 4/130 (3%) Strand=Plus/Plus Query 11162 CTGATTTTTCTTGGCACCAACGTGCGCACCGCGCAGAGCTACACCGGCAACCTGTATCTC 11221 |||||||| || || ||||| | ||||||||||||| |||| |||||| | ||| || Sbjct 100 CTGATTTTCCTCGGGACCAATGCGCGCACCGCGCAGGGCTATCACGGCAATTTCTATTTC 159 Query 11222 GATGAATATTTCTGGA--TACCGAAATTCCAGGAGCTGCGAAAGGTCGCCAGCGGCATGT 11279 || || | |||||||| ||| | ||| |||| || ||||||||||||| ||| Sbjct 160 GACGAGTTTTTCTGGACCTACGG--GTTCGAGGAACTCAACAAGGTCGCCAGCGCGATGG 217 Query 11280 CGCTGCATAA 11289 || |||| || Sbjct 218 CGATGCACAA 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94172316198996