Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq235844 95.1 1e-14 seq80092 93.3 5e-14 seq32492 86.0 7e-12 >seq235844 Length=520 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 157690 CGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAA 157749 ||||| || ||||||| |||||||||| |||||||||||| |||||||||||||||| Sbjct 279 CGGGGCGTGGCGCAGCCTGGTAGCGCGCCTGCTTTGGGAGCGGGAGGTCGCAGGTTCGAA 220 Query 157750 TCCTGTCACCCCGAC 157764 ||||||| ||||||| Sbjct 219 TCCTGTCGCCCCGAC 205 >seq80092 Length=8714 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 157689 ACGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGA 157748 ||||||||| |||||||||||||||| | || || |||| || ||||||||||||| | Sbjct 135 ACGGGGTGTGGCGCAGCTTGGTAGCGTGCTTCGTTCGGGACGAAGAGGTCGCAGGTTCAA 76 Query 157749 ATCCTGTCACCCCGAC 157764 |||||||||||||||| Sbjct 75 ATCCTGTCACCCCGAC 60 >seq32492 Length=2091 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 157690 CGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAA 157749 |||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 1506 CGGGATGTGGCGCAGCTTGGTAGCGCATCCGCTTTGGGAGCGGAGGGTCGCAGGTTCGAA 1447 Query 157750 TCCTGTCACCCCGAC 157764 |||||||| |||||| Sbjct 1446 TCCTGTCATCCCGAC 1432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545850057032280