Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq13366 185 4e-42
>seq13366
Length=6323
Score = 185 bits (204), Expect = 4e-42
Identities = 273/384 (71%), Gaps = 2/384 (1%)
Strand=Plus/Plus
Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981
|| ||| | | |||||| | |||||| ||||| | |||||||| | ||||| ||||||
Sbjct 1735 TCTACTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTC 1794
Query 25982 ATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040
|||||||| || || ||| ||||| |||| ||| ||||| ||||| ||||| | |||||
Sbjct 1795 ATTTCTTCCTTACCTGTG-TTCTTCTTTAAATCCAAGAATTCAAATATATCCGCATGCCA 1853
Query 26041 TGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCT 26100
|| |||||||| || ||||| || | ||| ||||||||||||||| |||||
Sbjct 1854 AGGCTCTAAATAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCT 1913
Query 26101 TGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCT 26160
||||| | || | ||| |||||||||| |||| ||| |||| | || || ||||
Sbjct 1914 GGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCC 1973
Query 26161 ATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCA 26220
| || | || || | ||| || || | ||| | ||| || |||||||| |
Sbjct 1974 AGCTATGTAAGAACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGA 2033
Query 26221 TTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTT 26280
||| ||||| |||||| | | | ||||| ||||| |||| |||||||| ||||
Sbjct 2034 TTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTT 2093
Query 26281 CATTCCTAATAAAAAACAAGAAGA 26304
||| ||| | ||||| || ||
Sbjct 2094 CATAGCTATAAGGAAACAGGAGGA 2117
Score = 125 bits (138), Expect = 4e-24
Identities = 353/529 (67%), Gaps = 16/529 (3%)
Strand=Plus/Plus
Query 24645 CGATATTTT--CTTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTC-TAA 24701
|| |||||| |||| |||| ||||| || |||| | |||||||||| || | |||
Sbjct 492 CGTTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAA 551
Query 24702 GATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTT 24761
| || |||||||| ||||| ||| | | |||||| ||| ||||| || || || ||||
Sbjct 552 G-TAGTACATTCCTGTTTTTAATCCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTT 610
Query 24762 TTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTT 24821
|| || ||| | | | | | | ||| | |||||| |||| | |||| |
Sbjct 611 TTCCATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTC 670
Query 24822 GTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATC 24881
|||||| || || | | ||| ||||||| || || || | | ||||||||
Sbjct 671 CTCTATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACA 730
Query 24882 TCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATT-TTCTCTC-AA 24939
||| |||| || | ||||| || |||| | ||| | |||||||| || | | ||
Sbjct 731 AATCTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAA 790
Query 24940 TA-GATTCAATCTCATATTCGGTGTCCAAAGATTAATTTTT-TCAAGATCTCTAATCAAG 24997
|| |||| | |||||| ||| | || | |||| ||| | | |
Sbjct 791 TAAGATT---TTTCATATCTTCATCCCACAAATCAGCCCGAGTCAA-ATCAGTCAGAAGA 846
Query 24998 TGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAA--GTTTGAAG 25055
|| | || | | | |||||||||||| || |||||||| ||| ||| ||||| |
Sbjct 847 TGATGGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCT--TTGGTAAATATTTGATG 904
Query 25056 TGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTA 25115
| || ||||||||| ||||| | || || | ||||| | |||||| || || |||||
Sbjct 905 TAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAG 964
Query 25116 ATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTT 25164
||||| ||||| ||||| | |||||||| ||| | |||| || |||
Sbjct 965 GAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTT 1013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252185496809225
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |