Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq13366 192 7e-44
seq170880 107 2e-18
seq216741 82.4 9e-11
>seq13366
Length=6323
Score = 192 bits (212), Expect = 7e-44
Identities = 485/729 (67%), Gaps = 24/729 (3%)
Strand=Plus/Minus
Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937
|||||| | ||| | || | || ||||||||| |||||||| ||| | || ||||||
Sbjct 1595 TGGAAGTCAATTATAGAAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGAT 1536
Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997
|||||||||| |||||||| ||||| ||| | || || || || | |||||||||
Sbjct 1535 GCTTGTAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 1476
Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057
|| || || | | ||||| | ||||| ||| || ||||| | || || ||
Sbjct 1475 ACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATA 1416
Query 76058 GCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAA 76117
|| ||| | || ||| |||| | | || ||| ||| | ||||| | | |||
Sbjct 1415 GCACTTAACATGTTTGT---TGAA---AATAACAGATTTAATTTTAAAAAATTAAAAGAA 1362
Query 76118 ATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT- 76176
|||||||||||||| || ||||| ||||| ||| ||||| ||||||||||| ||
Sbjct 1361 ATCACAAAGATTGTAACTCAAAATTTAAACAAAGTTATTGATGTTAATTTTTATCCTGTC 1302
Query 76177 --TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGT 76234
|||| || || || |||||| |||| |||||||||||| | |||||||| ||
Sbjct 1301 CCTGAG---GCAAAAACTTCAAATATGAGACATAGACCTATTGGTATTGGTGTTCAGGGC 1245
Query 76235 CTCGCGGATGTATTTATTTTG-TGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGAT 76293
| || |||| ||| | ||| || || | | || || |||| | |
Sbjct 1244 ATGGCAGATGCGTTTGTGTTGATGAGAATA-TCTTACGAAAGTGAGAAAGCAATACTTCT 1186
Query 76294 GAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353
||| | || |||||||| || ||| | | | | || || ||||||||||| ||
Sbjct 1185 CAATCAACAAATATTTGAAACAATTTATTATGGTGCATTAGAAGCTAGTTGTGAATTAGC 1126
Query 76354 TGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCA 76413
|||| ||||| | || |||| | | || ||| || |||||| | || ||
Sbjct 1125 TGAAAAAGAAGGTGCATACAGCACATATCAAGGGAGTCCAGCAAGCCAAGGTATCCTCCA 1066
Query 76414 GTTTGATATGTGGG---AAGGTGAAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGA 76470
|| ||||||||||| || | || | || | ||||||| ||| || || ||
Sbjct 1065 GTATGATATGTGGGACAAAACTCCTACAGACCT---TTGGGACTGGGCTGTCCTTAAAGA 1009
Query 76471 ACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCC 76528
| || ||| | | ||| | || || ||| ||||| || || ||||| || |||
Sbjct 1008 AAAGATAGCAA--AACATGGTTTGCGCAATTCTCTATTGATAGCTCCTATGCCGACTGCC 951
Query 76529 TCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588
|| || |||||||| | || || | ||||| |||||||| | ||| |||| || |||
Sbjct 950 TCTACTGCACAAATTCTTGGCAACACTGAATCTTTTGAACCCTTTACATCAAATATTTAC 891
Query 76589 CTGAGAAGA 76597
| ||||||
Sbjct 890 CAAAGAAGA 882
>seq170880
Length=1133
Score = 107 bits (118), Expect = 2e-18
Identities = 222/328 (68%), Gaps = 2/328 (1%)
Strand=Plus/Plus
Query 75145 TTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCAT 75204
||||||||| |||| ||||||||| | ||| |||| || |||| ||| | ||
Sbjct 594 TTACTTTGGCTTCAAGACCCTTGAGCGGTCCTACCTTCTCCGCATCGACGGCCGCGTCGC 653
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
|| ||| ||| ||||| ||||||| ||||| |||||||||||||| | || |
Sbjct 654 CGAGCGCCCGCAGCACATGCTCATGCGCGTCGCTATCGGCATCCACGGCAACAACGTCAC 713
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCC-CAAGGTATGTTCATTCACGCAACACCAA 75323
|| | ||||| ||| || | |||||| || ||| |||| || || | || |
Sbjct 714 GCGTGCGATCGAGACGTACAACTACATGTCCGAAAAGTA-CTTCACCCATGCCTCGCCCA 772
Query 75324 CCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACA 75383
|||||||||||||||| || || || ||| | | ||||||||| | || | |
Sbjct 773 CCCTCTTCAATGCTGGCACGCCCCACCCCCAGCTTGCGTCTTGCTTCCTCGTGGCGATGA 832
Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 75443
|||| ||||| ||| | || ||||| | || || | | ||| || ||||| |||
Sbjct 833 AGGACGACTCGATCGAGGGCATCTACGACACCCTGAAGACGTGCGCCATGATCTCCAAGA 892
Query 75444 GGGCTGGGGGTATTGGGATGCACATCCA 75471
|| || ||||| || | ||||| ||
Sbjct 893 CCGCCGGCGGTATCGGCCTCCACATTCA 920
>seq216741
Length=856
Score = 82.4 bits (90), Expect = 9e-11
Identities = 237/354 (67%), Gaps = 12/354 (3%)
Strand=Plus/Minus
Query 13547 ATTACCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGAAAG 13606
|| || || ||| ||| | || || || || || ||||| ||| | | || ||
Sbjct 751 ATCACTGGAATTGTCAAACTTGAAGATGCCAATAACGCGGGGACGAGAAATTCGCACAAA 692
Query 13607 TGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCT 13666
|| |||||||| | || |||||||| ||||| || | | || || || || | |
Sbjct 691 TGCACTCTCATCCTTACCGAGGGTGACTCGGCAAAGAGTTTGGCTGTAGCTGGCATAGGT 632
Query 13667 GTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGG 13726
| || |||||||| | || || || |||||| | || || ||| | |||||| |||
Sbjct 631 ATGGTGGGTCGTGACAATTATGGAGTCTTCCCATTGCGTGGCAAACTTTTGAATGTGCGG 572
Query 13727 GACGCTT-CGGTGGCACAGCT-CACATCAA-ACCAGGAGTTCAACGATCTCAAGAAGATC 13783
|| ||| ||||| | || | | || ||| ||| || |||||| | |||| |||||
Sbjct 571 GAAGCTAGCGGTG-CTCAATTGCTCAACAATACCGAGA-TTCAAC-ACATCAAACAGATC 515
Query 13784 CTTGGTCTTCAACAAGGAAAAGACTACCAAGATGTTTCTGA---ACTTCGCTATGGTCGT 13840
| || | |||||||||||| | ||| | || | || || || || ||||| |
Sbjct 514 TTGGGATTGCAACAAGGAAAAAAGTAC--ACATCTGTC-GACTCTCTCCGTTATGGATCT 458
Query 13841 CTTATGATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATC 13894
|| ||| | ||||| || || ||||| || |||||||| |||||||||
Sbjct 457 CTGATGGTGATGACTGACCAGGACTTCGATGGCTCACACATCAAAGGTCTCATC 404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594503358819040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |