Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq13366 192 7e-44 seq170880 107 2e-18 seq216741 82.4 9e-11 >seq13366 Length=6323 Score = 192 bits (212), Expect = 7e-44 Identities = 485/729 (67%), Gaps = 24/729 (3%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 |||||| | ||| | || | || ||||||||| |||||||| ||| | || |||||| Sbjct 1595 TGGAAGTCAATTATAGAAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGAT 1536 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 |||||||||| |||||||| ||||| ||| | || || || || | ||||||||| Sbjct 1535 GCTTGTAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 1476 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 || || || | | ||||| | ||||| ||| || ||||| | || || || Sbjct 1475 ACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATA 1416 Query 76058 GCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAA 76117 || ||| | || ||| |||| | | || ||| ||| | ||||| | | ||| Sbjct 1415 GCACTTAACATGTTTGT---TGAA---AATAACAGATTTAATTTTAAAAAATTAAAAGAA 1362 Query 76118 ATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT- 76176 |||||||||||||| || ||||| ||||| ||| ||||| ||||||||||| || Sbjct 1361 ATCACAAAGATTGTAACTCAAAATTTAAACAAAGTTATTGATGTTAATTTTTATCCTGTC 1302 Query 76177 --TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGT 76234 |||| || || || |||||| |||| |||||||||||| | |||||||| || Sbjct 1301 CCTGAG---GCAAAAACTTCAAATATGAGACATAGACCTATTGGTATTGGTGTTCAGGGC 1245 Query 76235 CTCGCGGATGTATTTATTTTG-TGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGAT 76293 | || |||| ||| | ||| || || | | || || |||| | | Sbjct 1244 ATGGCAGATGCGTTTGTGTTGATGAGAATA-TCTTACGAAAGTGAGAAAGCAATACTTCT 1186 Query 76294 GAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353 ||| | || |||||||| || ||| | | | | || || ||||||||||| || Sbjct 1185 CAATCAACAAATATTTGAAACAATTTATTATGGTGCATTAGAAGCTAGTTGTGAATTAGC 1126 Query 76354 TGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCA 76413 |||| ||||| | || |||| | | || ||| || |||||| | || || Sbjct 1125 TGAAAAAGAAGGTGCATACAGCACATATCAAGGGAGTCCAGCAAGCCAAGGTATCCTCCA 1066 Query 76414 GTTTGATATGTGGG---AAGGTGAAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGA 76470 || ||||||||||| || | || | || | ||||||| ||| || || || Sbjct 1065 GTATGATATGTGGGACAAAACTCCTACAGACCT---TTGGGACTGGGCTGTCCTTAAAGA 1009 Query 76471 ACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCC 76528 | || ||| | | ||| | || || ||| ||||| || || ||||| || ||| Sbjct 1008 AAAGATAGCAA--AACATGGTTTGCGCAATTCTCTATTGATAGCTCCTATGCCGACTGCC 951 Query 76529 TCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 || || |||||||| | || || | ||||| |||||||| | ||| |||| || ||| Sbjct 950 TCTACTGCACAAATTCTTGGCAACACTGAATCTTTTGAACCCTTTACATCAAATATTTAC 891 Query 76589 CTGAGAAGA 76597 | |||||| Sbjct 890 CAAAGAAGA 882 >seq170880 Length=1133 Score = 107 bits (118), Expect = 2e-18 Identities = 222/328 (68%), Gaps = 2/328 (1%) Strand=Plus/Plus Query 75145 TTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCAT 75204 ||||||||| |||| ||||||||| | ||| |||| || |||| ||| | || Sbjct 594 TTACTTTGGCTTCAAGACCCTTGAGCGGTCCTACCTTCTCCGCATCGACGGCCGCGTCGC 653 Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264 || ||| ||| ||||| ||||||| ||||| |||||||||||||| | || | Sbjct 654 CGAGCGCCCGCAGCACATGCTCATGCGCGTCGCTATCGGCATCCACGGCAACAACGTCAC 713 Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCC-CAAGGTATGTTCATTCACGCAACACCAA 75323 || | ||||| ||| || | |||||| || ||| |||| || || | || | Sbjct 714 GCGTGCGATCGAGACGTACAACTACATGTCCGAAAAGTA-CTTCACCCATGCCTCGCCCA 772 Query 75324 CCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACA 75383 |||||||||||||||| || || || ||| | | ||||||||| | || | | Sbjct 773 CCCTCTTCAATGCTGGCACGCCCCACCCCCAGCTTGCGTCTTGCTTCCTCGTGGCGATGA 832 Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 75443 |||| ||||| ||| | || ||||| | || || | | ||| || ||||| ||| Sbjct 833 AGGACGACTCGATCGAGGGCATCTACGACACCCTGAAGACGTGCGCCATGATCTCCAAGA 892 Query 75444 GGGCTGGGGGTATTGGGATGCACATCCA 75471 || || ||||| || | ||||| || Sbjct 893 CCGCCGGCGGTATCGGCCTCCACATTCA 920 >seq216741 Length=856 Score = 82.4 bits (90), Expect = 9e-11 Identities = 237/354 (67%), Gaps = 12/354 (3%) Strand=Plus/Minus Query 13547 ATTACCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGAAAG 13606 || || || ||| ||| | || || || || || ||||| ||| | | || || Sbjct 751 ATCACTGGAATTGTCAAACTTGAAGATGCCAATAACGCGGGGACGAGAAATTCGCACAAA 692 Query 13607 TGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCT 13666 || |||||||| | || |||||||| ||||| || | | || || || || | | Sbjct 691 TGCACTCTCATCCTTACCGAGGGTGACTCGGCAAAGAGTTTGGCTGTAGCTGGCATAGGT 632 Query 13667 GTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGG 13726 | || |||||||| | || || || |||||| | || || ||| | |||||| ||| Sbjct 631 ATGGTGGGTCGTGACAATTATGGAGTCTTCCCATTGCGTGGCAAACTTTTGAATGTGCGG 572 Query 13727 GACGCTT-CGGTGGCACAGCT-CACATCAA-ACCAGGAGTTCAACGATCTCAAGAAGATC 13783 || ||| ||||| | || | | || ||| ||| || |||||| | |||| ||||| Sbjct 571 GAAGCTAGCGGTG-CTCAATTGCTCAACAATACCGAGA-TTCAAC-ACATCAAACAGATC 515 Query 13784 CTTGGTCTTCAACAAGGAAAAGACTACCAAGATGTTTCTGA---ACTTCGCTATGGTCGT 13840 | || | |||||||||||| | ||| | || | || || || || ||||| | Sbjct 514 TTGGGATTGCAACAAGGAAAAAAGTAC--ACATCTGTC-GACTCTCTCCGTTATGGATCT 458 Query 13841 CTTATGATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGTCTCATC 13894 || ||| | ||||| || || ||||| || |||||||| ||||||||| Sbjct 457 CTGATGGTGATGACTGACCAGGACTTCGATGGCTCACACATCAAAGGTCTCATC 404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594503358819040