Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_021061.1 Length=41491 Score E Sequences producing significant alignments: (Bits) Value seq153278 132 1e-26 seq189415 86.0 2e-12 >seq153278 Length=837 Score = 132 bits (146), Expect = 1e-26 Identities = 402/606 (66%), Gaps = 19/606 (3%) Strand=Plus/Plus Query 28549 ACGGGTCGAGTGAGGTGATCGCGTCGTGCAACCGCCCCTCGGGCACCTTCGTGTAGATCT 28608 |||||||||| | | ||||||| ||| || | || || ||||| ||||| | | Sbjct 91 ACGGGTCGAGGGTGTCGATCGCGCTGTGGCGGCGGCGGTCCGGAACCTTGGTGTACAGCG 150 Query 28609 GCGTCGTCCCGATCGACTTATGACGCAAGAGTTCCTGCACAACGCGAATATCCGTGCCGT 28668 || | | ||| ||| || |||| || |||||||| || | ||||| || | Sbjct 151 CGGTTGACTGGATTGACGCGTGGCGCATCAGCTCCTGCACTGTCCGCAGATCCGCACCTT 210 Query 28669 TGTCGAGCAGCGTGGTCGCGTACCAATGCCGCAGACAATGTGGTGTGCCTCGCACGCCGG 28728 ||||||||| || || ||||||| |||||||| | ||||| ||||| | || || Sbjct 211 CGTCGAGCAGTGTCGTTCCGTACCAGTGCCGCAGCGAGTGTGGGGTGCCGGGGACATCGA 270 Query 28729 CGCGCTTCATCGTGCGGCCGATGATGTCCGACACCGATTTCGACAGGATGTGCTCGCC-- 28786 ||||| ||||| ||| ||||||||||| || ||||||||| ||| ||||| || Sbjct 271 CGCGCCGCATCGCGCGCCCGATGATGTCGCTGACGGATTTCGACCGGACGTGCTGACCGG 330 Query 28787 --CTCGTGGCCCCGCATCGGGAACCACCAGCCGGCGGCGGGCATCTCCGAGGCCATCTCG 28844 | ||| | || | ||||||||||| ||| || ||||||| | |||| ||| Sbjct 331 GGCACGTCGAGTTGC-TGGGGAACCACCATCCGCGGGTGGGCATCGTCTCGGCCGCGTCG 389 Query 28845 ATCAGCAGCGGGTGCAGCGGCACCGAGCGCAGACGT-TTCCCCTTGCCTTTGACCCACAG 28903 | || || ||||||||||| | || ||| | | | || |||||| | || | ||| Sbjct 390 ACGAGAAGTGGGTGCAGCGGGAGTGACCGC-GTCTTGTTGTGCTTGCCGGTCACTCGCAG 448 Query 28904 -GACA--TGGGCCGATAGGTCGATATCCTCGCCGCGGATTTTTGCGATCTCGTGGACGCG 28960 ||| | ||| | | ||||| ||||||||||| | | | | || || || Sbjct 449 CGACGGTTTGGCGG---GATCGATGTCCTCGCCGCGCACCTGGGACACGTCTCCCACACG 505 Query 28961 CAGACCGGCGAGCAGCGC-GAGCAGAATCATGCGCCGCGTCGAGGCCCACATTCG-GGTC 29018 ||||||||||| || | || || ||||| || ||| | ||| || | | Sbjct 506 GAGACCGGCGAG-GGCACACAGAAGGATCATCACGCGGGTCCGGTGGTGCATCCGCGATG 564 Query 29019 TGCAGCAAATTTACGACGTCAGCGTCGCTGATCGGGCGGGGCTGGCGGTCGGGCAGCCGC 29078 || |||| | | || ||| ||| || || || || | ||||||||| |||| Sbjct 565 TG-AGCAGGATGGGCAGGTGAGCATCGGACATGGGCCGTGGTTCGCGGTCGGGTTGCCGA 623 Query 29079 GGCGCACCGACCTTGACCATTGGGTTGTCCTCGCGGCGGTCGGTGA-GTTGTAGCCACTT 29137 |||| |||||| ||||| || ||||| || ||||| ||| | || |||||| | Sbjct 624 AGCGCTGGGACCTTCACCATCGGATTGTCGAGACGTCGGTC-CTGACGCTGCAGCCACGT 682 Query 29138 GAACCA 29143 ||||| Sbjct 683 AAACCA 688 >seq189415 Length=2896 Score = 86.0 bits (94), Expect = 2e-12 Identities = 111/152 (73%), Gaps = 10/152 (7%) Strand=Plus/Minus Query 32498 TGCACGCAGACCGACCCCGAGGTGTTCTTTCCCGAGAAAGGCGAACCCGTTGGCCCCGCG 32557 ||| |||||||||||||||||| |||||| |||||||| |||| | | | |||||| Sbjct 551 TGCGCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGGCG-----GCTCGACCCGCG 497 Query 32558 CG--CAA---TATCTGCAGGCGGTGCGAAGTGCAGGCGAAGTGCCTCGAGGTTGCACTCG 32612 | ||| |||||| | | ||||| ||| ||||| ||||||||||| || || Sbjct 496 AGGCCAAGCGCATCTGCCAGGGCTGCGAGGTGAAGGCGGAGTGCCTCGAGTACGCGCTGC 437 Query 32613 CCCGCGAAGAAGAGTTCGGCATCTGGGGCGGT 32644 | || || |||||| |||||||||||| Sbjct 436 ACAAGGACGAGCGGTTCGGTATCTGGGGCGGT 405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132213134979238