Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq28654 141 1e-28
seq27511 132 7e-26
seq27512 122 1e-22
seq7533 120 4e-22
seq141872 95.1 2e-14
>seq28654
Length=3315
Score = 141 bits (156), Expect = 1e-28
Identities = 125/156 (80%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| |||||||| | ||||||||||| ||||| |||||||| |||| ||||
Sbjct 2158 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 2099
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||| |||||| |||||| ||||| ||||||||||| ||||| || |||
Sbjct 2098 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 2039
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978
||| | | |||| ||| || ||||| | ||||||
Sbjct 2038 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGAT 2003
Score = 127 bits (140), Expect = 3e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| | ||||||||||||||||| || ||||| | ||||| ||| |||
Sbjct 1474 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 1415
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || || || ||| ||||||||| ||||| || ||||| || ||||| |||
Sbjct 1414 GACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 1355
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | | |||| ||| || ||||| | |||||| | ||||| || ||||| |||
Sbjct 1354 CAGCGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 1295
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032
|| |||||| | || || || ||||||
Sbjct 1294 ATTCAGAAAGAGTCAACCCTGCACTTAGTG 1265
Score = 123 bits (136), Expect = 4e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || ||| |||| || |||||||| ||||||||||| ||| ||
Sbjct 1018 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 959
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||| || ||| ||| || ||||| ||||| || || || ||||| |||
Sbjct 958 GACACTATTGAAAATGTTAAAGCTAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 899
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | |||| || || |||||||| || ||| | | ||| | || || ||||||
Sbjct 898 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTATAAT 839
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| |||||| | || | || || || ||| | ||| |||| |||
Sbjct 838 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGGT 791
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | |||||| | ||||||||||| || || || ||||| || ||
Sbjct 1247 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATC 1188
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | ||| ||| || ||| ||| || |||||||| ||||| || |||||||| ||
Sbjct 1187 AGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 1128
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||| | | || | || ||||| || || |||||| | | || | || || || ||
Sbjct 1127 ACAACGTCTTATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACCCTGTCTGACTACAA 1068
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031
||| |||||| |||| ||||| || ||
Sbjct 1067 TATCCAGAAAGAGTCGACCCTTCACTTGGT 1038
Score = 104 bits (114), Expect = 3e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
|||||| || ||| |||| || | || |||||||| || || ||||| || || ||
Sbjct 2387 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTC 2328
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | ||| ||| ||||| || || ||||| ||||| || || || ||||| ||
Sbjct 2327 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 2268
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| || | |||| ||| || || || || |||||| | | || ||||| ||||||||
Sbjct 2267 ACAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAA 2208
Query 156002 TATATCCAAA-GAGGCGACGCTTCATTTAGTGTT 156034
||| || ||| || | || || |||||||| ||
Sbjct 2207 TAT-TCAAAAGGAATCTACCCTACATTTAGTATT 2175
Score = 93.3 bits (102), Expect = 6e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| | || ||| | || || || ||||| || | || || || |||
Sbjct 1702 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGAGCCATCT 1643
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||| || || ||| || ||||||||||| || || || ||||| |||
Sbjct 1642 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAA 1583
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | || | ||| || |||||||| |||||| | || | || || || ||
Sbjct 1582 CAACGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAAC 1523
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031
|| |||||| | || |||||||||||
Sbjct 1522 ATCCAAAAAGAGTCTACCCTTCATTTAGT 1494
>seq27511
Length=800
Score = 132 bits (146), Expect = 7e-26
Identities = 139/183 (76%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| ||| | || ||| ||||||| |||||||| || || ||||| |||| |||
Sbjct 216 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACTATCACTTTGGAAGTGGAAGCTTC 275
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| || ||| || || || || ||||| ||||||||||| ||||| || ||
Sbjct 276 TGATACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAAGAAGGCATTCCTCCTGACCA 335
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| || | |||| ||| || || ||||| |||||| | || || |||||||||||
Sbjct 336 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACATTGTCAGATTATAA 395
Query 156002 TAT 156004
|||
Sbjct 396 TAT 398
Score = 104 bits (114), Expect = 3e-17
Identities = 99/127 (78%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | || ||| ||||||| || ||||| ||||| ||||| |||| |||
Sbjct 672 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACATTGGAAGTGGAAGCTTC 731
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| ||| ||| || || ||||| || |||||||| || || || ||||| ||
Sbjct 732 TGATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 791
Query 155942 ACAAAGA 155948
||||||
Sbjct 792 GCAAAGA 798
>seq27512
Length=242
Score = 122 bits (134), Expect = 1e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | || ||| ||||||| || ||||| ||| | ||||| || ||
Sbjct 228 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 169
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| | || ||| || || ||||| |||||||| |||||||| |||||||| ||
Sbjct 168 TGACACAATCGAAAATGTTAAGGCAAAAATTCAAGATAAGGAAGGCATTCCTCCAGACCA 109
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||| | |||| ||| || |||||||| || ||| | || ||||||| || ||
Sbjct 108 ACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAGGATGGACGTACACTATCAGACTACAA 49
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031
||| ||||| | || | ||||||||
Sbjct 48 TATTCAGAAAGAATCTACTTTACATTTAGT 19
>seq7533
Length=2710
Score = 120 bits (132), Expect = 4e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18413 TCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTT 18472
|| || | ||| ||||||| ||||| ||||| ||||| ||||| || ||||| | ||
Sbjct 1040 TCCTTAGGATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTT 981
Query 18473 TCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAA 18532
|||||||| || ||||||| ||| || | || || || | ||||| ||| ||
Sbjct 980 TCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAA 921
Query 18533 AATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACA 18592
|| | || ||||| ||||||||||| ||||| |||| || || || ||||| || |||
Sbjct 920 AAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACA 861
Query 18593 TATTTAATGAAATGTTTTTCATTATCCTT 18621
| || || |||||||| ||| ||| ||
Sbjct 860 TGCTTGATAAAATGTTTCTCACAATCTTT 832
>seq141872
Length=750
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 17869 GTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCAT 17928
||||||||| ||||| ||||| ||||||||||| || ||||||||||| || | ||||||
Sbjct 684 GTATTCTCCAACTTTCTTCTCAAAGAAATTTGTTTTGCCTTCCAATGAGATGAGATTCAT 625
Query 17929 AAAATCAAATGGATT 17943
|||||| ||||||||
Sbjct 624 AAAATCGAATGGATT 610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729337133882800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |