Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq164434 877 0.0 seq188633 334 4e-87 seq84152 291 4e-74 seq235485 242 2e-59 seq134864 152 3e-32 seq12676 149 3e-31 seq231474 132 2e-26 seq248049 98.7 5e-16 seq226360 91.5 8e-14 >seq164434 Length=1826 Score = 877 bits (972), Expect = 0.0 Identities = 761/943 (81%), Gaps = 1/943 (0%) Strand=Plus/Minus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 || ||||||||||||||||| ||||| ||||| ||||| ||| | || | ||| Sbjct 1150 GCGATCAACTGGAACCGCGTTCCCGACGAGAAGGACGCCGAGGTGTGGGATCGCCTCACC 1091 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 ||||||||||||||| |||||| | || || ||||||||||||||| | ||||||||| Sbjct 1090 GGCAACTTCTGGCTGCCCGAGAAGGTGCCGGTGTCCAACGACATCCCGTCGTGGGGCACG 1031 Query 59386 CTGACGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGAC 59445 ||||| ||| ||| | ||||| |||||||| ||||||||||||||| |||||||| Sbjct 1030 CTGACCGAGCTCGAGAAGCAGCTCACCATGCGGGTGTTCACCGGCCTGACGCTGCTCGAC 971 Query 59446 ACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGAG 59505 || ||||||||||| || || || ||| |||||||| || ||| || ||||||||| Sbjct 970 ACCATCCAGGGCACGGTCGGCGCGGTGTCGCTGATCCCGGATGCGTCGACCCCGCACGAG 911 Query 59506 GAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAAC 59565 ||||||||| ||| |||||||||||||||||||||||||| || |||||||||||| Sbjct 910 GAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTGCATGCCAAGAGCTACAGCTCG 851 Query 59566 ATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGGAG 59625 ||||||||||| |||||||| ||||||| ||||||| |||||||||||||||||||||| Sbjct 850 ATCTTCTCGACCCTGTGCTCCACCAAGGACATCGACGAGGCGTTCCGCTGGTCGGAGGAG 791 Query 59626 AATCCGAACCTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGACGATCCG 59685 || |||| | || |||||||| | |||||| |||||||||||| || ||||| ||| Sbjct 790 AACGAGAACGTCCAGCGCAAGGCCAACATCGTCATGGACTACTACCGTGGCGACGACCCG 731 Query 59686 CTGAAGCGGAAGGTGGCCTCGACGTTGCTGGAGGGGTTCCTGTTCTACTCGGGCTTCTAC 59745 || ||||| ||||| ||||||||| |||| ||| ||||||||||||||||||||||||| Sbjct 730 CTCAAGCGCAAGGTCGCCTCGACGCTGCTCGAGTCGTTCCTGTTCTACTCGGGCTTCTAC 671 Query 59746 CTGCCGATGTACTGGTCTAGTCGGGGGAAGCTGACGAACACGGCCGACATGATCCGGCTC 59805 ||||||||||||||||| || || | ||||| || ||||| ||||| | ||||| || Sbjct 670 CTGCCGATGTACTGGTCGAGCCGCGCAAAGCTCACCAACACAGCCGATCTCATCCGTCTG 611 Query 59806 ATCATTCGTGACGAGGCGGTGCACGGCTACTACATCGGATACAAGTTCCAGCGCGGCCTG 59865 ||||| || |||||||| |||||||| ||||||||||| ||||||| |||||||| ||| Sbjct 610 ATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGGTACAAGTACCAGCGCGCGCTG 551 Query 59866 GAGACTCAGAACGAGGCTCGCCGCGAGGAGCTGAAGGACTACACGTACGGTCTGCTACTC 59925 ||| |||| | | || || ||||||| ||||||||||| | || ||||| || Sbjct 550 GAGGTGCAGACCCCCGAGCGTCGTCAGGAGCTCAAGGACTACACCTTCGAGCTGCTGTTC 491 Query 59926 GAGTTGTACGACAACGAGATTGAGTACACGCAGGATCTGTACGACGGCGTGGGACTGACT 59985 ||| ||||||||||||||| || ||||| || || ||||||| || ||||| || Sbjct 490 GAGCTGTACGACAACGAGACCGACTACACCGAGACCCTCTACGACGAGGTCGGACTCACC 431 Query 59986 GAGGATGTCAAGATGTTCCTGCGCTACAACGCCAACAAGGCGCTGATGAATCTCGGCTAC 60045 ||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 430 GAGGACGTCAAGAAGTTCCTGCGCTACAACGCCAACAAGGCCCTGATGAACCTCGGCTAC 371 Query 60046 GAGGCGCTGTTCCCGCGCGACGAAACCGAGGTGAATGCGGCGATCTTGGCGGCACTGTCC 60105 |||| ||||||||| |||| | |||||| |||| ||| || |||| ||||| Sbjct 370 GAGGGCCTGTTCCCGAAGGACGCCGTCCAGGTGAGCCCGGCCATCCTGTCGGCGCTGTCG 311 Query 60106 CCTGGCGGGGACGAGAACCACGACTTCTTCTCGGGCTCTGGCAGCACGTATGTGATTGGC 60165 || || ||||||||||||||||||||||| ||||| |||||| | || ||||| ||| Sbjct 310 CCCAACGCCGACGAGAACCACGACTTCTTCTCCGGCTCCGGCAGCTCCTACGTGATCGGC 251 Query 60166 AAGGCTGAGGTTACGGAAGACGAGGATTGGGACTTCT-AGTCC 60207 ||||| | || || || ||||| || |||||||||| ||||| Sbjct 250 AAGGCCGTCGTCACCGAGGACGACGACTGGGACTTCTGAGTCC 208 >seq188633 Length=1165 Score = 334 bits (370), Expect = 4e-87 Identities = 269/325 (83%), Gaps = 0/325 (0%) Strand=Plus/Minus Query 59385 GCTGACGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGA 59444 ||| ||| ||||||||| ||||| |||||||| ||||||||||||||| | ||||| Sbjct 1165 GCTCACGCCGGAAGAGCAGCAGCTCACCATGCGGGTGTTCACCGGCCTGACGCTCCTCGA 1106 Query 59445 CACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGA 59504 |||||||||||||||||| ||||| | ||||||||||| ||||||||||| |||||||| Sbjct 1105 CACGATCCAGGGCACCGTCGGTGCGATCAGCCTGATCCCCGACGCGATCACCCCGCACGA 1046 Query 59505 GGAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAA 59564 || ||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 1045 AGAAGCGGTCTACACAAACATCGCGTTCATGGAGTCCGTGCACGCGAAGAGCTACTCGTC 986 Query 59565 CATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGGA 59624 ||||||||||| ||| ||| | |||||||||| |||||||||||||| | || Sbjct 985 GATCTTCTCGACCCTGGCGTCGACGCCCGAGATCGACGACGCGTTCCGCTGGTCCGTCGA 926 Query 59625 GAATCCGAACCTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGACGATCC 59684 ||| ||||||||||| ||||| ||||||||||| ||||||||| |||||||| || Sbjct 925 GAACCCGAACCTGCAGAAGAAGGCGCAGATCGTCCTCGACTACTACACCGGTGACGACCC 866 Query 59685 GCTGAAGCGGAAGGTGGCCTCGACG 59709 |||||||| ||||| ||||||||| Sbjct 865 CCTGAAGCGCAAGGTCGCCTCGACG 841 Score = 325 bits (360), Expect = 2e-84 Identities = 330/432 (76%), Gaps = 12/432 (3%) Strand=Plus/Minus Query 59773 AAGCTGACGAACACGGCCGACATGATCCGGCTCATCATTCGTGACGAGGCGGTGCACGGC 59832 ||||| || ||||| || ||| | ||||| || ||||| |||||||| || || || || Sbjct 820 AAGCTCACCAACACCGCTGACCTCATCCGCCTGATCATCCGTGACGAAGCCGTCCATGGG 761 Query 59833 TACTACATCGGATACAAGTTCCAGCGCGGCCTGGAGACTCAGAACGAGGCTCGCCGCGAG 59892 ||||||||||| |||||||||||| ||||| ||| | ||||| ||| || Sbjct 760 TACTACATCGGGTACAAGTTCCAGAAGGGCCTCGAGGGCCTCTCCGAGGAGCGCAAGCAG 701 Query 59893 GAGCTGAAGGACTACACGTACGGTCTGCTACTCGAGTTGTACGACAACGAGATTGAGTAC 59952 ||| | ||||||||||||| | ||||| ||||| | ||||| |||||| | ||||| Sbjct 700 GAGATCAAGGACTACACGTTCAACCTGCTGTTCGAGCTCTACGAGAACGAGGTGCAGTAC 641 Query 59953 ACGCAGGATCTGTACGACGGCGTGGGACTGACTGAGGATGTCAAGATGTTCCTGCGCTAC 60012 |||||||| || |||||| || || ||||| ||||| ||||||| |||||||| |||| Sbjct 640 ACGCAGGACCTCTACGACCAGGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGCACTAC 581 Query 60013 AACGCCAACAAGGCGCTGATGAATCTCGGCTACGAGGCGCTGTTCCCGCGCGACGAAACC 60072 ||||||||||||||||||||||| || ||||||||| || |||||||| Sbjct 580 AACGCCAACAAGGCGCTGATGAACCTGGGCTACGAGCCGATGTTCCCG------------ 533 Query 60073 GAGGTGAATGCGGCGATCTTGGCGGCACTGTCCCCTGGCGGGGACGAGAACCACGACTTC 60132 ||||||| |||||||| | |||| ||||| || || |||||||||||||||||| Sbjct 532 AAGGTGAACCCGGCGATCCTCTCGGCGCTGTCGCCCAACGCCGACGAGAACCACGACTTC 473 Query 60133 TTCTCGGGCTCTGGCAGCACGTATGTGATTGGCAAGGCTGAGGTTACGGAAGACGAGGAT 60192 ||||| ||||| |||||| |||| || || |||||||| | || |||||||| || Sbjct 472 TTCTCCGGCTCGGGCAGCTCGTACGTCATCGGCAAGGCCGTCAACACCGAAGACGACGAC 413 Query 60193 TGGGACTTCTAG 60204 ||||| |||||| Sbjct 412 TGGGATTTCTAG 401 >seq84152 Length=5826 Score = 291 bits (322), Expect = 4e-74 Identities = 566/821 (69%), Gaps = 65/821 (8%) Strand=Plus/Plus Query 62035 CACTCGCCGAAGTGGATGGAGCAGCTGGGATCTCTCGGCGGCGGCAACCACTTCATCGAG 62094 |||||| ||||||| |||||||| || || ||||||||||||||||||||||||||| Sbjct 4710 CACTCGAAGAAGTGGCGTGAGCAGCTCGGGTCGCTCGGCGGCGGCAACCACTTCATCGAG 4769 Query 62095 TTGTGTGTCGACGCCGAGGACAACGTGTGGCTGTTCCTGCACTCCGGTTCTCGCGGAGTC 62154 |||| |||||| || |||||| ||||||||||||||||||| || || ||| Sbjct 4770 CTGTGCCTCGACGAGTCCGATCGGGTGTGGATGTTCCTGCACTCCGGTTCGCGGGGTGTC 4829 Query 62155 GGCAACAAGATCGCGCAGCGCCACATCAAGGCGGCTGTGGAGTACTGCGCAGAGGGTGCG 62214 |||||| |||||||||||| |||||| ||| | ||||||| | || Sbjct 4830 GGCAACCGGATCGCGCAGCGACACATC---GCG----------ATCGCGCAGAAGCTGGC 4876 Query 62215 CGGCTGGCTGGCTCCGATTCGGTTCGCGCCCGCTACCGACTCCCTCACCGAGATCTCGCG 62274 | | | |||| | ||| || | |||| ||| || |||||| Sbjct 4877 CAGGAAG-TGGCACA--------TCGTGCTC----CCGA-------ACCCGGACCTCGCG 4916 Query 62275 TTCCTGGACGAGGGA-ACGTGGATGTTCGACACGTACATCAAGGAGCTGGAGTGGGCCCA 62333 | |||| || || ||| | | |||| |||| || ||| |||| |||||| || Sbjct 4917 TACCTGC-CGTCCGAGACGCCGGAGCTCGAGGTGTACCTCCGGGATCTGGCGTGGGCACA 4975 Query 62334 GCGGTTCGCGTACCTGAACCGTGCGGAGATGATGGACCGCTTCGTCCAGGTGTTCGCGTG 62393 |||||||||| | |||||| || ||||||||||| |||||| |||| ||||||| Sbjct 4976 GCGGTTCGCGCTCGAGAACCGCGCTGAGATGATGGATCGCTTCCGGCAGGCGTTCGCGCA 5035 Query 62394 GTGGATGGGCGTCGAGGCTCAGCGTGTCGAGGTGGAG------CGCATCAACTGCCACCA 62447 ||| | || ||| | | | | | |||| | ||| || |||||| |||||| Sbjct 5036 CTGGGTAGGTCACGACGGTGACCCGGCCGAGCTCGAGACCGAGCGGATCAACACCCACCA 5095 Query 62448 CAACTACACGGTCCCC-ACCGTGATCGACGGGGAGCGAGTGTGGTTGACCCGCAAGGGGG 62506 ||||||||| |||| | || | || ||| || |||||| ||||||||||||| | Sbjct 5096 CAACTACACCGTCCGAGAGCGACA-CGGCGGCAAGGACGTGTGGCTGACCCGCAAGGGTG 5154 Query 62507 CAATCGACGCGACCGAGGGCAAGCTGGGCGTGATCCCGGGCTCGATGGGCACCCGGTCGT 62566 | ||||||||| |||||| || |||| | ||||||||||||||||| || ||||| | Sbjct 5155 CGATCGACGCGCACGAGGGTGTGCGGGGCATCATCCCGGGCTCGATGGGGACGCGGTCCT 5214 Query 62567 ACGTGGTGCGGGGGAAGGG---CTGCAGCGCTTCTTTGCATTCTGCGCCCCATGGAGCCG 62623 || | ||| || ||||| | || ||| ||| || ||| ||||| || || || | Sbjct 5215 ACATCGTGACCGGCAAGGGACACGGCGGCG-GTCTGTG--TTCGGCGCCGCACGGCGCGG 5271 Query 62624 GTCGCCGGTTCTCCCGCACGAAGGCCAAGGAACTGTTCACC-AGG--GATGACCTGGCCG 62680 | || |||||||| || | |||||||| | || |||| ||| ||| | ||||| Sbjct 5272 GGCGTCGGTTCTCACGGGCCGAGGCCAAGCGTCGGTACACCGAGGCCGATCTCGAGGCCG 5331 Query 62681 AGCAGATGCAGGGCATCGAGTGGCGCGAGGACATCGCCGAGAAGCTGG-TCGATGAGATC 62739 |||| || ||||||| || | || || ||| ||| |||| |||||| Sbjct 5332 ---CGATGACCGGGATCGAGTACCG---GCACGGGGCGGAG----TGGATCGACGAGATC 5381 Query 62740 CCGTCCTGC-TACAAGGACATCGACCAGGTCATGGCCGATGCCGAACCGCTGGTGGACGT 62798 ||| | || |||||| ||||||| || |||||||| ||||| | || ||| | Sbjct 5382 CCG-CAGGCGTACAAGAGCATCGACGTCGTGATGGCCGACGCCGAGCGCCTCGTGTCGAT 5440 Query 62799 GGTGACAACCCTGCGCCAGGTTCTCAACGTCAAGGGCACCT 62839 | |||||||| ||||| |||||||| |||||||||| Sbjct 5441 CGACCACACCCTGCGTCAGGTGCTCAACGTGAAGGGCACCT 5481 Score = 199 bits (220), Expect = 2e-46 Identities = 166/203 (82%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 61634 TCAACTTCGCTTCGGAGATCGACCAAGCGACGATTGACCAAGCCAAGCAGATCGCGGAGA 61693 |||||||||| || ||||||||| | |||||| ||||| |||||| ||| ||| | | Sbjct 4383 TCAACTTCGCCTCCGAGATCGACGAGAAGACGATCGACCAGGCCAAGGAGACCGCAGCGC 4442 Query 61694 TGCCGTTCATCTACCCGCACCTGGCGCTGATGCCGGATGCCCACTCGGGCAAGGGATCTG 61753 |||| ||| | |||||||| ||||| ||||||||||||| |||| ||||||||||| | Sbjct 4443 TGCCCTTCGTGCACCCGCACGTGGCGTTGATGCCGGATGCGCACTACGGCAAGGGATCCG 4502 Query 61754 CGGTCGGCACCGTCATCCCCACCAAGGGCGCTGTCATTCCGGCCGCTGTTGGGGTGGACA 61813 ||||||| ||||||||||| || | ||| ||||| |||||||| || ||||| |||| Sbjct 4503 CGGTCGGTACCGTCATCCCGACGGTCGACGCCGTCATCCCGGCCGCGGTCGGGGTCGACA 4562 Query 61814 TCGGCTGCGGCATGATTGCCGTC 61836 |||| ||||||||||| |||||| Sbjct 4563 TCGGGTGCGGCATGATCGCCGTC 4585 >seq235485 Length=973 Score = 242 bits (268), Expect = 2e-59 Identities = 224/284 (79%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 || ||||||||||| ||| || |||||||||||||| ||||||||| |||| | ||| Sbjct 690 GCGATCAACTGGAATCGCCTCCAGGACGACAAGGATCTCGAGGTCTGGGACCGTCTCACC 749 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 ||||||||| |||| |||||| | || | ||||||||||||| | | ||| ||| Sbjct 750 GGTAACTTCTGGTTGCCGGAGAAGGTGCCGCTGTCCAACGACATCCAGTCGTGGCACACC 809 Query 59386 CTGACGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGAC 59445 || | | | | ||||| | | |||| ||||| ||| |||| || || |||||||| Sbjct 810 CTCAAGCCGCACGAGCAGCTGATGACGACCCGGGTGTTCGCCGGGCTCACCCTGCTCGAC 869 Query 59446 ACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGAG 59505 || | |||||||| ||||| || || ||||||||||| || |||||||| ||||||||| Sbjct 870 ACCGTGCAGGGCACGGTGGGCGCGGTCAGCCTGATCCCCGATGCGATCACCCCGCACGAG 929 Query 59506 GAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGC 59549 || || || |||||||||||||| |||||||||||||||||||| Sbjct 930 GAAGCCGTCTACACGAACATCGCCTTCATGGAGTCGGTGCACGC 973 >seq134864 Length=649 Score = 152 bits (168), Expect = 3e-32 Identities = 361/532 (68%), Gaps = 40/532 (8%) Strand=Plus/Minus Query 62263 CGAGATCTCGCGTTCCTGGACGAGGGAAC-GTGGATGTTCGACACGTACATCAAGGAGCT 62321 || |||||||||| ||||| ||||| || | ||| ||||||| | ||| | ||||| Sbjct 507 CGCGATCTCGCGTACCTGGTGGAGGGCACCGAGGA-GTTCGACGCCTACCTGGCCGAGCT 449 Query 62322 GGAGTGGGCCCAGCGGTTCGCGTACCTGAACCGTGCGGAGATGATGGACCGCTTCGTCCA 62381 ||||| |||| |||||| || ||||| | ||||||||||| || |||| | Sbjct 448 CACCTGGGCACAGCAGTTCGCCGCACTCAACCGCGACGAGATGATGGAGCGTGTCGTGC- 390 Query 62382 GGTGTTCGC-GTGGTGGATGGGCGTCGAGGCTCAGCGTGTCGAGGTGGAGCGCATCAACT 62440 ||| || || ||||| |||| |||| || ||||| ||| | || || Sbjct 389 GGTCACTGCAGTTCTGGATCGGCGCGGAGGTGGAG-GTGTCC-----GAGGACCTCGGCT 336 Query 62441 GCCACCACAACTACACGGTCCCCACCGTGATCGACGGGGAGCGAGTGTGGTTGACCCGCA 62500 |||||||||||||||||| || | | | |||| |||| ||||| || |||||| Sbjct 335 GCCACCACAACTACACGGCCCGCGAGACGCACCACGGTGAGCTGCTGTGGGTGTCCCGCA 276 Query 62501 AGGGGGCAATCGACGCGACCGAGG---GCAAGCTGGGCGTGATCCCGGGCTCGATGGGCA 62557 |||| || ||| |||| ||||| || | || |||||||||| |||||||| | Sbjct 275 AGGGTGCCATCAACGC---CGAGGTCGGCGTCCCCGGGCTGATCCCGGGGTCGATGGGTA 219 Query 62558 CCCGGTCGTACGTGGTGC------GGGGGAAGGGCTGCAGCGCTTCTTTGCATTCTGCGC 62611 | ||||||||| ||| ||||||| | |||| | || |||| | || | Sbjct 218 CGGCGTCGTACGTCGTGTCCGGCAGGGGGAACGA--GCAGTCC--CTGTGCAGT--GCAC 165 Query 62612 CCCATGGAGCCGGTCGCCGGTTCTCCCGCACGAAGGC---CAAGGAACTGTTCACCAGGG 62668 | || ||||| || || | ||| || |||||||| |||| || ||||| | Sbjct 164 CGCACGGAGCAGGCCGGGCCTACTCGCGGACGAAGGCGCGCAAG--ACC-TTCACGGTCG 108 Query 62669 ATGACCTGGCCGAGCAGATGCAGGGCATCGAGTGGCGCGAGGACATCGCCGAGAAGCTGG 62728 | |||||| | | |||| || ||||||| ||||| | | ||| | | | Sbjct 107 ACGACCTGCGGGCGGCGATGGTCGGGATCGAGTACCGCGA------CACGGAGGCGTTCG 54 Query 62729 TCGATGAGATCCCGTCCTGCTACAAGGACATCGACCAGGTCATGGCCGATGC 62780 |||| |||||||| | ||||||||||||||||||||| ||||||||||| Sbjct 53 TCGACGAGATCCCCGGCGCCTACAAGGACATCGACCAGGTGATGGCCGATGC 2 >seq12676 Length=358 Score = 149 bits (164), Expect = 3e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 61634 TCAACTTCGCTTCGGAGATCGACCAAGCGACGATTGACCAAGCCAAGCAGATCGCGGAGA 61693 ||| || |||||| |||||| | ||| | | || |||||||||| ||| ||| Sbjct 105 TCAGCTGGGCTTCGATCATCGACGACCTCACGCTCGCGCAGGCCAAGCAGACCGCCGAGC 164 Query 61694 TGCCGTTCATCTACCCGCACCTGGCGCTGATGCCGGATGCCCACTCGGGCAAGGGATCTG 61753 | || | | ||| ||||||||||||||||||| || ||| |||||||||| | Sbjct 165 TCGACATCGTGTCGCCGTACCTGGCGCTGATGCCGGACGCGCACCTGGGCAAGGGAGCGA 224 Query 61754 CGGTCGGCACCGTCATCCCCACCAAGGGCGCTGTCATTCCGGCCGCTGTTGGGGTGGACA 61813 ||||||| ||||||||||||||| || ||| |||| |||||||| || |||||||||| Sbjct 225 CGGTCGGTTCCGTCATCCCCACCAGGGACGCGATCATCCCGGCCGCGGTCGGGGTGGACA 284 Query 61814 TCGGCTGCGGCATGATTGCCGTCAAGACGCGGTTC 61848 |||||||||| ||| || |||| ||| | |||| Sbjct 285 TCGGCTGCGGGATGCGCGCGGTCAGGACCCAGTTC 319 >seq231474 Length=516 Score = 132 bits (146), Expect = 2e-26 Identities = 317/471 (67%), Gaps = 55/471 (12%) Strand=Plus/Plus Query 62111 AGGACAACGTGTGGCTGTTCCTGCACTCCGGTTCTCGCGGAGTCGGCAACAAGATCGCGC 62170 ||||| ||| |||||||||||||||||||| || ||||| ||||||||||||||||| | Sbjct 5 AGGACCGCGTCTGGCTGTTCCTGCACTCCGGCTCCCGCGGCGTCGGCAACAAGATCGCCC 64 Query 62171 AGCGCCACATCAAGGCGGCTGTGGAGTACTGCGCAGAGGGTGCGCGGCTGGCTGGCTCCG 62230 ||| ||||||||||| || | | ||| || || ||| | ||| | || Sbjct 65 AGCACCACATCAAGGTCGC--GAGCGACCTGTGCCGA-----CGCTGGTGGAT-----CG 112 Query 62231 ATTCGGTTCGCGCCCGCTACCGACTCCCTCACCGAGATCTCGCGTTCCTGGACGA-GGGA 62289 | || || ||||| || || ||||| | ||||| || ||| Sbjct 113 A-----------CCTGC--CCGACCCC--------GACCTCGCCTACCTGGTGGAGGGGG 151 Query 62290 ACGTGGATGTTCGACACGTACATCAAGGAGCTGGAGTGGGCCCAGCGGTTCGCGTACCTG 62349 ||| | |||| | |||||| ||| || ||||||||||| ||||| || Sbjct 152 ACG-ACACGTTCTGGGCCTACATCCGCGAGATGCGGTGGGCCCAGCACTTCGCCCTGCTC 210 Query 62350 AACCGTGCGGAGATGATGGACCGCTTCGTCCAGGTGTTCG-CGTGGTGGA--TGGGCGTC 62406 ||||| | |||||||||| |||| |||||||| | ||| || || || |||||| | Sbjct 211 AACCGCGAGGAGATGATGCACCG---CGTCCAGGAGGTCGTCGCGGACGAGCTGGGCG-C 266 Query 62407 GAGGCTCAGCGTG-TCGAGGTGGAGCGCATCAACTGCCACCACAACTACACGGTCCCC-- 62463 | | |||| | || ||| ||||||||||||||||||||||| | | | Sbjct 267 G------ACCGTGCAGGCGGACGAGACGATCAACTGCCACCACAACTACACCGAGCGCGA 320 Query 62464 -ACCGTGATCGACGGGGAGCGAGTGTGGTTGACCCGCAAGGGGGCAATCGACGCGACCGA 62522 |||| ||| | ||| |||||| || |||||||||| || ||| ||| | | Sbjct 321 GCGCGTGTTCGGTCGCGAG---GTGTGGGTGTCCCGCAAGGGCGCGATCCGTGCGGGCAA 377 Query 62523 GGGCAAGCTGGGCGTGATCCCGGGCTCGATGGGCACCCGGTCGTACGTGGT 62573 ||| | | || ||||||| |||||||||||||| ||||||||| || Sbjct 378 GGGTGATCGCGGGCTGATCCCCGGCTCGATGGGCACGGCGTCGTACGTCGT 428 >seq248049 Length=1043 Score = 98.7 bits (108), Expect = 5e-16 Identities = 224/330 (68%), Gaps = 9/330 (3%) Strand=Plus/Plus Query 43639 GGCACCCTGACGGCCGA-CCCGACCCTGAACTTCACGCAGGGTGGCACTGCGGTGTCGAA 43697 |||| |||||||||||| ||||| ||| |||||| ||| | || || |||| Sbjct 583 GGCAACCTGACGGCCGATCCCGA-GCTGCGCTTCACCGCCTCCGGCGCGGCCGTTGCGAA 641 Query 43698 CATCACCATCGCGTGCAACACTC-GCCGCAAGAACCCGCA-GACCGATCAGTGGGAAGAC 43755 | ||||| |||| | | | | | | ||| || ||||| | || ||||| | ||| Sbjct 642 CTTCACCGTCGCATCGACCCCCCGGACGCTCGA--CCGCACCAGCGGCGAGTGGAAGGAC 699 Query 43756 GGCGACACCACGTTCATGCGTGGCACCATCTGGAAGCAGTTGGCGGAGAACGTCTCTGAT 43815 ||||| || ||| |||| ||| ||||||| |||| || ||||||||| | || Sbjct 700 GGCGAGGCCCTCTTCCTGCGCTGCAACATCTGGCGGCAGGCTGCCGAGAACGTCACGGAG 759 Query 43816 TCCCTCCGCAAGGGTGACCGTGTCCTCGCGCACGGCGTCCTGAAGCAGAAGGACTACGAG 43875 || ||| | || ||| ||| ||| |||| || |||||| || |||| Sbjct 760 TCGCTCACCCGCGGCTCCCGCGTCATCGTCACCGGCCGGCTCAAGCAGCGCAGCTTCGAG 819 Query 43876 ---AAGGACGGCGTCAAGCGCACCGCCTACGAGCTGGACATCGAGGGCATCGGCCCGTCG 43932 ||||| |||| |||||||||| | ||||||||| |||| | |||||||| ||| Sbjct 820 ACCAAGGAAGGCGAGAAGCGCACCGTCATCGAGCTGGAGGTCGACGAGATCGGCCCCTCG 879 Query 43933 CTGCGGTTCGCAACGGCGTCGGTGACCAAG 43962 ||||||| ||| || || ||| | |||| Sbjct 880 CTGCGGTACGCGACCGCCAAGGTCAACAAG 909 >seq226360 Length=376 Score = 91.5 bits (100), Expect = 8e-14 Identities = 196/294 (67%), Gaps = 21/294 (7%) Strand=Plus/Plus Query 43639 GGCACCCTGACGGCCGACCCGACCCTGAACTTCACGCAGGGTGGCACTGCGGTGTCGAAC 43698 |||| |||||||||||||||| ||| || ||||||| | || || ||| ||||| Sbjct 36 GGCAACCTGACGGCCGACCCGGAGCTGCGCTACACGCAGAGCGGGCTCGCCGTGGCGAAC 95 Query 43699 ATCACCATCGCGTGCAACACTCGCCGCAAGAACCCGCAGACCGATCAGTGGGAAGACGGC 43758 |||||||||| || ||| | ||||| ||||| | |||||| Sbjct 96 TTCACCATCGC---CAGCACCCCCCGCA---------------NNGAGTGGAAGGACGGC 137 Query 43759 GACACCACGTTCATGCGTGGCACCATCTGGAAGCAGTTGGCGGAGAACGTCTCTGATTCC 43818 || || |||| | || | | || |||| |||| || ||| ||||| | | || Sbjct 138 GAGGCCCTGTTCCTCCGGGCCTCCTGCTGGCGTGAGTTCGCCGAGCACGTCGCCGGGTCG 197 Query 43819 CTCCGCAAGGGTGACCGTGTCCTCGCGCACGGCGTCCTGAAGCAGAAGGACTACGA-GA- 43876 || |||||| ||| ||| ||||||| ||| |||||||||| |||||| || Sbjct 198 CTGACCAAGGGCAGCCGCGTCATCGCGCAGGGCCGCCTGAAGCAGCGCTCCTACGACGAC 257 Query 43877 -AGGACGGCGTCAAGCGCACCGCCTACGAGCTGGACATCGAGGGCATCGGCCCG 43929 || ||| |||||||||||| |||||| || |||| | ||||||||| Sbjct 258 CGCGATGGCAACAAGCGCACCGCGATCGAGCTCGAGGTCGACGAGATCGGCCCG 311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258056802526908