Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_021307.1 Length=49894 Score E Sequences producing significant alignments: (Bits) Value seq4597 98.7 3e-16 seq139035 84.2 7e-12 seq47396 84.2 7e-12 >seq4597 Length=157418 Score = 98.7 bits (108), Expect = 3e-16 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 33493 TCGACCTCGACCGAGATGTTGGTCGTCCAGTGCTTGCCGGTGTCCTGCTTGATCCGCATG 33552 || |||||||| |||||||| || |||||||| || ||| |||| ||| Sbjct 124422 TCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGCCTTGCAGTTGATG 124481 Query 33553 AACTCACGGATCTGCGGGTCGTTCCAGTGCATCATGGCCATGCGTGCCGACCGGCGTACA 33612 || || || | |||||||| |||| |||||| ||||| || || ||||| ||| || Sbjct 124482 AAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACGTGCA 124541 Query 33613 CCGCCGGCTACCACGCACTGAGCGATGGCGTGGTCGATCTCCATCGCCGCGATGCCG 33669 || || || || ||| | |||||| |||||||||||| ||| ||| |||||||| Sbjct 124542 CCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCCG 124598 >seq139035 Length=1904 Score = 84.2 bits (92), Expect = 7e-12 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 31421 ATGTAGAAGGTGGCCGTCGCGTGCTCCAGCACCGACTCGTGACCGACCTCCAGGATGTGC 31480 |||||||||||| ||| |||||||||||||| ||| ||| || ||||| ||||||||| Sbjct 1528 ATGTAGAAGGTGACCGACGCGTGCTCCAGCAGCGAGAGGTGGCCCACCTCGAGGATGTGC 1587 Query 31481 GCCAGGTAGTCCTCGTTCTCGGCCGT 31506 ||||||| | ||||| |||||| Sbjct 1588 CGCAGGTAGGCGGCGTTCGTGGCCGT 1613 >seq47396 Length=7053 Score = 84.2 bits (92), Expect = 7e-12 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 1688 GTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTGCAGGTTCGAGTCCTGCC 1747 ||||||||| ||| |||||||||||||||||| |||| |||||||||||| ||||||| | Sbjct 4059 GTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGTCCTGTC 4118 Query 1748 G 1748 | Sbjct 4119 G 4119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159014258498176