Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq77242 170 6e-37
seq13366 134 4e-26
seq26642 129 2e-24
seq257481 127 6e-24
seq245031 89.7 2e-12
seq78968 87.8 5e-12
seq14493 87.8 5e-12
>seq77242
Length=3334
Score = 170 bits (188), Expect = 6e-37
Identities = 343/498 (69%), Gaps = 12/498 (2%)
Strand=Plus/Minus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||||||||| ||||||| | ||| ||| |||||| || || ||||||| || ||
Sbjct 1646 CCTATCAAATCTACCAGGTCTTAATAAGGCTTTGTCTAAAATGTCCACTCTGTTAGTAGC 1587
Query 288909 TGCCAATACAACAATAGATTCGGT-TTGC-TTAAATCCATCCATACTTGTTAAAATTTGA 288966
|| ||||| |||| | || | | ||| || || |||||||| || || |||
Sbjct 1586 AGCTAATACTACAACA--TTGGTTGTTGTATTGAAACCATCCATTTCCACTAGAAGCTGA 1529
Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026
||||| || | ||| ||| || ||||| || | | | || ||| |||||
Sbjct 1528 TTAAGAGTATTTTCTTGTTCTGAATG---ACCTCCAAAA-CTTCTGCCTC-CTC-TTTTT 1475
Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086
||||||||||||| ||||| ||||| || | | ||| |||| || || | || |||
Sbjct 1474 CTACCAACAGCATCTATTTCATCAATAAATAATATACATGGAGCATGTTTCCGTGCCATT 1415
Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146
| || | || || || | || | |||| ||||||| ||||||||| ||| || |||
Sbjct 1414 GAGAACATATCCCTGACCCTAGAGGGACCAACACCAACAAACATTTCTAAAAACTCTGAA 1355
Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206
| |||||| ||| || | ||||| || || || ||| ||| | || ||||| ||
Sbjct 1354 CCTGATACTGTAATAAAGGGAACATTAGCCTCTCCAGCTGTTGCTTTAGCTAGAAGAGTT 1295
Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266
||||| |||||||| ||||| ||||| ||||||| || | ||| || || || |
Sbjct 1294 TTACCAGTTCCAGGGGGTCCTGTTAATAAGGCTCCCTTAGGAATTTTAGCTCC-TAAGTC 1236
Query 289267 -TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325
|||||| || |||| |||| || || | |||| |||| || |||| ||| || ||
Sbjct 1235 AATATATTGCTGAGGGTTCTTCAAGAAATTGACAAATTCCATAATTTCAATTTTAGCTTC 1176
Query 289326 ATCACATCCTGCTACATC 289343
||||| || || |||||
Sbjct 1175 CTCACAACCAGCAACATC 1158
>seq13366
Length=6323
Score = 134 bits (148), Expect = 4e-26
Identities = 578/899 (64%), Gaps = 36/899 (4%)
Strand=Plus/Plus
Query 155475 GGGTAAAAATTCACATCAATAATGTTATTTAAATTT---GTAACCAATACCTTGGTTACG 155531
|| |||||||| |||||||||| || ||||||||| || || ||| ||| || |
Sbjct 1306 GGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTAC-AAT--CTTTGTGATT 1362
Query 155532 TCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATA 155591
||| |||||| | | | |||| | |||| ||| |||||||| ||| | ||
Sbjct 1363 TCTTTTAATTTTTTAAAATTAAATCTGTTATTTTCA---ACAAACATGTTAAGTGCTATG 1419
Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCAC 155651
|| || || || || || || || | || |||||| |||| |||| |||
Sbjct 1420 GAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAA 1479
Query 155652 AGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCC 155711
|| || || || || ||||| | ||| || || ||| || |||||||||||||||
Sbjct 1480 AGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCC 1539
Query 155712 TTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT---CTTTAGCCAG 155768
|| || | |||||||| || || ||||||| || || || | ||| ||| |||
Sbjct 1540 TTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTT---CCAT 1596
Query 155769 AGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTT--CATATACA 155826
| || | || | | ||| || | ||| ||| |||||||| ||||||
Sbjct 1597 AACTCTTGAGCTCTGACTTGTTTTATAAATCGTTTTTCTTCTTCATATTTGGCATATA-- 1654
Query 155827 GCGTTCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAA 155884
|||| || ||||| || | || ||| || ||||| || | || || || |
Sbjct 1655 --GTTCTTCAAATTCCTCTCCAAAGCAGTCAGCGAGGCCAGGACAATCATGAGGACACAT 1712
Query 155885 CAGCGACCAAATTTTATTACCGAT--TACACGCTCCATAAATACATCACTCGCCCAAATA 155942
|| ||||| || || || | ||| | | |||||| | ||| ||| | |
Sbjct 1713 GAGACTCCAAACTTCAT--CCTTTTCTACTCTTTTCATAAACAGATCTGGTATCCATAAA 1770
Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC-GTGATTCTTCCGTAGCTCTAA 156001
||||| || || || || || | || || | || ||| |||||| || || ||
Sbjct 1771 GCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTG-TTCTTCTTTAAATCCAA 1829
Query 156002 GAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---ATTCCT 156058
|||||| ||||| | ||| ||||| | ||| || ||||| || | |
Sbjct 1830 GAATTCAAATATATCCGCATGCCAAGGCTCTAAATAAATTGCAAATGCGCCGGGACGTTT 1889
Query 156059 CTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAAT 156118
|| ||||| ||||||||||| | ||||| || || | || | | ||| || | |
Sbjct 1890 GTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCAACATTGGCACTAG 1949
Query 156119 ACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT--TATGA 156176
|||||| || ||||| || || || | ||||| ||||| || |||
Sbjct 1950 ACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGAACC--CTGAGCTCTGATGCAATGT 2007
Query 156177 ATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTG 156236
|||||| || || ||||| | ||||||||||| || |||| |||| |||||
Sbjct 2008 GTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCA 2067
Query 156237 AAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGT 156296
|||||||||||||| ||| |||| ||| | || || | || || | || ||
Sbjct 2068 AAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAACAGGAGGAAAGCTGTGGC 2127
Query 156297 CGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
|| ||||| | ||| ||| |||||||| ||||||| ||||||| || | |||||
Sbjct 2128 CGCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGACAT 2186
>seq26642
Length=11175
Score = 129 bits (142), Expect = 2e-24
Identities = 209/295 (71%), Gaps = 8/295 (3%)
Strand=Plus/Plus
Query 302553 ATCATAACCAATCATAA-TGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAG 302611
||||||| | ||||| || || ||||| ||| ||||||||||||||||| |||||||
Sbjct 8566 ATCATAATGTACCATAACTGACT-CCATAGCCTTTATTAAACGACGCTGAATGTAACCAG 8624
Query 302612 TTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGA 302671
|| || ||||||||||| |||||||| ||||| ||||||| ||||| || |||||
Sbjct 8625 TTTCAGCAGTTTTTACAGCGGTATCAATGAGACCTTCACGACCTCCCATGGCGTGGAAAT 8684
Query 302672 ATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731
| | ||| ||| | || ||| | || | || |||||||| | | || |
Sbjct 8685 AAAACTCAGAGGGTGTCAAGCCGGCAAGGTATGAATTTTCGACGAAACCTCTAGATTCTG 8744
Query 302732 G--CG-AATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGA 302788
| || ||||||| ||| | || ||||||| || || || | | ||| | || |
Sbjct 8745 GACCGTAATCGTC---TTTGATGAAATGTGGCAATGTTCTTTTACGAAAACCGAACGGAA 8801
Query 302789 TACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|||||||||| ||||||||||| || || | || | ||| | ||| || || ||
Sbjct 8802 TACGCTTTCCTTCAACGTTCTGTTGCCCTACACAAGCAATAACCTGTGAGATGTT 8856
>seq257481
Length=676
Score = 127 bits (140), Expect = 6e-24
Identities = 177/248 (71%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 302569 ATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACA 302628
|| ||||| | | ||||| | ||| ||||| || |||||||| | || || ||
Sbjct 85 ATATCTTCAAGAGCCTTGACAAGACGGCGCTGGATGTAACCAGTCTCTGCGGTCTTGACC 144
Query 302629 GCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT 302688
|| || ||||| ||||| | || || |||| ||||||||||| | || | ||||
Sbjct 145 GCAGTGTCAATAAGACCTTCGCGTCCTGCCATGGCATGGAAGAAGAATTCCTGCGGTGTA 204
Query 302689 AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTG 302748
|| || | | | | ||| |||||||||| || | || ||||| |||| ||| |||
Sbjct 205 AGACCACGCAGATATGAGTTCTCAACGAAGCCTCTCGATTCGGGTGAATAATCGTCTTTG 264
Query 302749 GTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTC 302808
|||||||| |||| ||| | || ||||||| ||||||||||| || || ||||||
Sbjct 265 GTAAAGTGAGGCAAGGTGCGAAACTTGAAGCCGTACGGGATACGCTTGCCTTCGACGTTC 324
Query 302809 TGCTGTCC 302816
||||||||
Sbjct 325 TGCTGTCC 332
>seq245031
Length=307
Score = 89.7 bits (98), Expect = 2e-12
Identities = 127/177 (72%), Gaps = 4/177 (2%)
Strand=Plus/Minus
Query 302702 AGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCA 302761
||||| |||| || ||||| | ||||||||||| ||| ||| ||||| || ||||
Sbjct 276 AGGAGTTCTCGACAAAACCTTTAGACTCGGGCGAATAGTCATCCTTTGTAAAATGGGGCA 217
Query 302762 GGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGC 302821
| || |||| | | | || |||| |||||||| || ||||| ||||||| || | ||
Sbjct 216 GCGTTCTGTCCACGAATCCAAATGGAATACGCTTACCTTCAACAATCTGCTGGCCTACGC 157
Query 302822 ACGAAATCATCTGCGAAATATT--TAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876
| | | ||||||||| || || ||||| | || || || |||||| |||||
Sbjct 156 AAGCAGACATCTGCGAGATGTTGATAAATGA--ACCTTTAGATCCAGCAACCACCAT 102
>seq78968
Length=2099
Score = 87.8 bits (96), Expect = 5e-12
Identities = 159/231 (69%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 251425 CACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAG-- 251482
|| |||||||| | ||| ||||| || | ||| | | ||| | ||| ||| ||
Sbjct 1936 CAGACATGGACACGGTAGGCATCCGAGACATCAAACATCCGCTCTTTGAGGAATGCAGCA 1877
Query 251483 ATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGC 251542
|||| |||| |||||||| || ||||||||||| || |||||||| | |||||| || |
Sbjct 1876 ATGC--CGTGAGAAATCATGCAGTCACGCTCCATCTCTCCGAAACGCAAACCACCGTCAC 1819
Query 251543 GAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTAT 251602
| | | |||||| | ||||| || |||||| | | ||||| | ||| ||
Sbjct 1818 GGGAACGACCCTCCACCGGCTGGCGCGTGAGAATTTGGAGGGGACCACGTGCGCGCGAAT 1759
Query 251603 GTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGA 251653
| ||| || || ||||| ||||| | ||||| || | | |||||||
Sbjct 1758 GAATCTTGTCGTTAACCATGTGCTTCAATCGCTGATAATACGTCGGACCGA 1708
>seq14493
Length=16242
Score = 87.8 bits (96), Expect = 5e-12
Identities = 389/598 (65%), Gaps = 25/598 (4%)
Strand=Plus/Minus
Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463
|| || |||||||| |||||| || || | | ||| | |||||| | ||| | ||
Sbjct 15287 GCTATCAGACCACAGAAATTACAAACGTGAATACGGTACGGATCAGAAACTTCAAAGAGA 15228
Query 251464 CGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCG 251523
|| | | ||| | | |||||||| | || ||||||||| |||||||| ||
Sbjct 15227 CGTTCTCTCAAGAACTGTGCGGCACCGTGAGCGATTTGACAATCACGTTCCATTTCCCCA 15168
Query 251524 AAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACG-AGTGAGATTA--ACC 251580
||||| | ||| || || ||||| | || || ||| || || | | ||| |||
Sbjct 15167 AAACGCAAACCTCCGTCACGAGCACGCCCTTCCATAGGTTGTCGTACCAAAATTTGTACC 15108
Query 251581 ATAGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAG 251640
|| || | | | ||| || |||| |||||||||||| |||||||||||
Sbjct 15107 ---GGTCCTCTTGCTCTCGAATGAATTTTGTCATCTACCATATGCTTAAGACGCTGGTAA 15051
Query 251641 AATGCGGGACCGATGAAGATGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATA 251700
||| |||||| | ||| | || | || | |||||| || ||||||||||
Sbjct 15050 TATGTGGGACCCAAGAATACTTGCGCATTAATCTTTCGTCCAGTATGACCGTTATACATC 14991
Query 251701 ACTTCGTTTCCATTAGAT-TCATAACCAAGTTTCTGTAGCTCTGAAGCAATAT-CACCAA 251758
|||||||| || | || | ||| || | ||||| |||| ||| | | ||
Sbjct 14990 ACTTCGTTACC-TCGGAGGTGATAGCCGTACTCTTGTAGTAAAGAAGAAATTTTCTGCA- 14933
Query 251759 TCTTGAAT----TTGCTAAAACTGGTGC--CGTCTCCGTAAAGACCCAT-TTGAATCAAC 251811
| | || | | |||| ||||| |||| ||| ||| | || || | |
Sbjct 14932 -CGTTAACGGCATCGTTAAA--TGGTGTTGCGTCACCGATTTCTCCCTTGTTTGATGA-C 14877
Query 251812 ACTTTGCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGG 251871
|| || ||| || || ||| || | || ||||||||| || || ||||||
Sbjct 14876 ACCTTTCCTTGAATACATTCAATCAAGTGACCAATTGTCATACGAGAAGGGATGGCATGG 14817
Query 251872 GGATTGATGATGATGTCGGGTTTCAGTCCATCAGCA-GTGAAGGGCATATCCTTTTCCTC 251930
||||| || ||||| || ||| | | || || ||| || || |||||||| | || ||
Sbjct 14816 GGATTAATAATGATATCTGGTGTTAAGCCCTC-GCATGTAAACGGCATATCTTCTTG-TC 14759
Query 251931 AATAATGT-TTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
||| || ||||| ||||| ||||| |||||||||||| |||||||| |||||
Sbjct 14758 GATACTGGATTCCACAGGTTCCTTTTTGACCGTGACGAGAAGCAAACTTATCTCCAAT 14701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1466592462162971
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