Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_021531.1
Length=223989
Score E
Sequences producing significant alignments: (Bits) Value
seq76033 113 6e-20
seq243462 100 4e-16
seq256480 91.5 2e-13
seq108450 89.7 7e-13
seq263247 86.0 9e-12
seq259185 86.0 9e-12
>seq76033
Length=7108
Score = 113 bits (124), Expect = 6e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 99591 TCTTGTCAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAACATCGCG 99650
|| || |||||||||||||| ||||||||| ||||| | ||||||||||| |||||||||
Sbjct 6370 TCCTGCCAGCTCTATCAGCGCAGTGCCGACCTGTTCCTCGGTGTGCCGTTCAACATCGCG 6429
Query 99651 TCGTATGCTCTACTGATTCACATGTTTGCACAGCAGGCGAATATGGCGGTGGGCGATTTC 99710
|| ||||| || || | |||||| | || |||||| | | ||| || || |||
Sbjct 6430 TCCTATGCCCTGCTCACCCACATGATGGCCGCGCAGGCCGGCCTCGAGGTCGGTGAGTTC 6489
Query 99711 GTCTGGACCGGCGGTGA 99727
|| ||||||||||| ||
Sbjct 6490 GTGTGGACCGGCGGGGA 6506
>seq243462
Length=264
Score = 100 bits (110), Expect = 4e-16
Identities = 125/169 (74%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 98982 TTCGGCCACCAGATGCGTTTCAACTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGC-G 99040
||||| ||||||||||| ||| || || || || ||||||||||| || || ||| |
Sbjct 168 TTCGGGCACCAGATGCGGTTCGACCTGTCGGAGGGGTTCCCGCTGGTCACCACGAAGAAG 109
Query 99041 TTGCCACCTGCGCTCTATTATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATAT 99100
||| ||||||| || | ||| || ||||||||||||||| ||||| ||||| |
Sbjct 108 GTGC-ACCTGCGGTCGGTGATCGTCGAGCTGCTGTGGTTCCTGCGCGGCGAGACCAACGT 50
Query 99101 CCAGTACCTGAAAGATAATGGTGTAACCATTTGGGACGAATGGGCGGAC 99149
|| | ||| | || || || || || ||||||||||||||||||
Sbjct 49 CCGCTGGCTGCAGGAGCGCGGCGTGACGATCTGGGACGAATGGGCGGAC 1
>seq256480
Length=539
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 99051 CGCTCTATTATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTG 99110
||||| || ||| |||||||||||||||||| |||||||||||| ||| | |||
Sbjct 183 CGCTCGATCATCGTCGAACTGCTGTGGTTCCTGCGCGGCGACACCAATGTCCGCTGGCTG 124
Query 99111 AAAGATAATGGTGTAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCG 99170
| || || | || |||||||||||||||||| | ||||| ||||| |||
Sbjct 123 CAGGAGCGCAAGGTCGCGATCTGGGACGAATGGGCGGACGAGGCGGGCGATCTCGGCCCG 64
Query 99171 GTATACGGTAAGCAGTGGCG 99190
|| ||||| ||||| |||||
Sbjct 63 GTCTACGGCAAGCAATGGCG 44
>seq108450
Length=476
Score = 89.7 bits (98), Expect = 7e-13
Identities = 103/139 (74%), Gaps = 3/139 (2%)
Strand=Plus/Plus
Query 99043 GCCACC---TGCGCTCTATTATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATA 99099
|||||| |||| | || ||||| ||||||||||||||||||| |||||||||||
Sbjct 186 GCCACCAGATGCGGTNNATCATCCACGAACTGCTGTGGTTCCTGACCGGCGACACCAACG 245
Query 99100 TCCAGTACCTGAAAGATAATGGTGTAACCATTTGGGACGAATGGGCGGACAAAAATGGCG 99159
| | ||| | | || || || || || |||||||| ||||| ||| |||||||
Sbjct 246 TGCGCGCCCTCCAGGCCAACGGGGTGACGATCTGGGACGAGTGGGCCGACGCCAATGGCG 305
Query 99160 ACCTCGGTCCGGTATACGG 99178
| ||||| || || |||||
Sbjct 306 ATCTCGGACCCGTCTACGG 324
>seq263247
Length=570
Score = 86.0 bits (94), Expect = 9e-12
Identities = 122/169 (72%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 99597 CAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAACATCGCGTCGTAT 99656
|||||||| ||||| | |||| | ||| | || |||||||| |||||||| ||
Sbjct 338 CAGCTCTACCAGCGCTCGGGCGACATCTTCCTCGGCGTGCCGTTCAACATCGCCAGCTAC 279
Query 99657 GCTCTACTGATTCACATGTTTGCACAGCAG-GCGAATATGGCGGTGGGCGATTTCGTCTG 99715
|| || || | ||||| | || ||||| ||| ||| ||| ||||| ||| ||||
Sbjct 278 GCGCTGCTCACCCACATCCTCGCGCAGCAATGCGGGC-TGGAGGTCGGCGAGTTCATCTG 220
Query 99716 GACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGGCACGT 99764
||||||||| || || || ||||| |||||||| || ||||| |||
Sbjct 219 GACCGGCGGCGACTGCCACCTCTATTCGAACCATCTCGACCAGGCGCGT 171
>seq259185
Length=438
Score = 86.0 bits (94), Expect = 9e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 98952 GACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAACTTGCAA 99011
||||| ||||| || ||||| | ||||||| ||||||||||| ||| || | |
Sbjct 160 GACCGCACCGGCACGGGCACCCGCAGCGTCTTCGGGCACCAGATGCGCTTCGACCTCGAG 219
Query 99012 GAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCATGAACTG 99071
| || ||||||||||| || || ||||| |||| | ||||| || | || ||| ||
Sbjct 220 GCCGGCTTCCCGCTGGTGACCACGAAGCGGCTCCACGTCCGCTCGATCGTGCACGAATTG 279
Query 99072 CTGTGGTTCCTG 99083
||||||||||||
Sbjct 280 CTGTGGTTCCTG 291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 714154701569320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |