Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq76033 113 6e-20 seq243462 100 4e-16 seq256480 91.5 2e-13 seq108450 89.7 7e-13 seq263247 86.0 9e-12 seq259185 86.0 9e-12 >seq76033 Length=7108 Score = 113 bits (124), Expect = 6e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 99591 TCTTGTCAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAACATCGCG 99650 || || |||||||||||||| ||||||||| ||||| | ||||||||||| ||||||||| Sbjct 6370 TCCTGCCAGCTCTATCAGCGCAGTGCCGACCTGTTCCTCGGTGTGCCGTTCAACATCGCG 6429 Query 99651 TCGTATGCTCTACTGATTCACATGTTTGCACAGCAGGCGAATATGGCGGTGGGCGATTTC 99710 || ||||| || || | |||||| | || |||||| | | ||| || || ||| Sbjct 6430 TCCTATGCCCTGCTCACCCACATGATGGCCGCGCAGGCCGGCCTCGAGGTCGGTGAGTTC 6489 Query 99711 GTCTGGACCGGCGGTGA 99727 || ||||||||||| || Sbjct 6490 GTGTGGACCGGCGGGGA 6506 >seq243462 Length=264 Score = 100 bits (110), Expect = 4e-16 Identities = 125/169 (74%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 98982 TTCGGCCACCAGATGCGTTTCAACTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGC-G 99040 ||||| ||||||||||| ||| || || || || ||||||||||| || || ||| | Sbjct 168 TTCGGGCACCAGATGCGGTTCGACCTGTCGGAGGGGTTCCCGCTGGTCACCACGAAGAAG 109 Query 99041 TTGCCACCTGCGCTCTATTATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATAT 99100 ||| ||||||| || | ||| || ||||||||||||||| ||||| ||||| | Sbjct 108 GTGC-ACCTGCGGTCGGTGATCGTCGAGCTGCTGTGGTTCCTGCGCGGCGAGACCAACGT 50 Query 99101 CCAGTACCTGAAAGATAATGGTGTAACCATTTGGGACGAATGGGCGGAC 99149 || | ||| | || || || || || |||||||||||||||||| Sbjct 49 CCGCTGGCTGCAGGAGCGCGGCGTGACGATCTGGGACGAATGGGCGGAC 1 >seq256480 Length=539 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 99051 CGCTCTATTATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTG 99110 ||||| || ||| |||||||||||||||||| |||||||||||| ||| | ||| Sbjct 183 CGCTCGATCATCGTCGAACTGCTGTGGTTCCTGCGCGGCGACACCAATGTCCGCTGGCTG 124 Query 99111 AAAGATAATGGTGTAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCG 99170 | || || | || |||||||||||||||||| | ||||| ||||| ||| Sbjct 123 CAGGAGCGCAAGGTCGCGATCTGGGACGAATGGGCGGACGAGGCGGGCGATCTCGGCCCG 64 Query 99171 GTATACGGTAAGCAGTGGCG 99190 || ||||| ||||| ||||| Sbjct 63 GTCTACGGCAAGCAATGGCG 44 >seq108450 Length=476 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/139 (74%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 99043 GCCACC---TGCGCTCTATTATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATA 99099 |||||| |||| | || ||||| ||||||||||||||||||| ||||||||||| Sbjct 186 GCCACCAGATGCGGTNNATCATCCACGAACTGCTGTGGTTCCTGACCGGCGACACCAACG 245 Query 99100 TCCAGTACCTGAAAGATAATGGTGTAACCATTTGGGACGAATGGGCGGACAAAAATGGCG 99159 | | ||| | | || || || || || |||||||| ||||| ||| ||||||| Sbjct 246 TGCGCGCCCTCCAGGCCAACGGGGTGACGATCTGGGACGAGTGGGCCGACGCCAATGGCG 305 Query 99160 ACCTCGGTCCGGTATACGG 99178 | ||||| || || ||||| Sbjct 306 ATCTCGGACCCGTCTACGG 324 >seq263247 Length=570 Score = 86.0 bits (94), Expect = 9e-12 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 99597 CAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAACATCGCGTCGTAT 99656 |||||||| ||||| | |||| | ||| | || |||||||| |||||||| || Sbjct 338 CAGCTCTACCAGCGCTCGGGCGACATCTTCCTCGGCGTGCCGTTCAACATCGCCAGCTAC 279 Query 99657 GCTCTACTGATTCACATGTTTGCACAGCAG-GCGAATATGGCGGTGGGCGATTTCGTCTG 99715 || || || | ||||| | || ||||| ||| ||| ||| ||||| ||| |||| Sbjct 278 GCGCTGCTCACCCACATCCTCGCGCAGCAATGCGGGC-TGGAGGTCGGCGAGTTCATCTG 220 Query 99716 GACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGGCACGT 99764 ||||||||| || || || ||||| |||||||| || ||||| ||| Sbjct 219 GACCGGCGGCGACTGCCACCTCTATTCGAACCATCTCGACCAGGCGCGT 171 >seq259185 Length=438 Score = 86.0 bits (94), Expect = 9e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 98952 GACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAACTTGCAA 99011 ||||| ||||| || ||||| | ||||||| ||||||||||| ||| || | | Sbjct 160 GACCGCACCGGCACGGGCACCCGCAGCGTCTTCGGGCACCAGATGCGCTTCGACCTCGAG 219 Query 99012 GAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCATGAACTG 99071 | || ||||||||||| || || ||||| |||| | ||||| || | || ||| || Sbjct 220 GCCGGCTTCCCGCTGGTGACCACGAAGCGGCTCCACGTCCGCTCGATCGTGCACGAATTG 279 Query 99072 CTGTGGTTCCTG 99083 |||||||||||| Sbjct 280 CTGTGGTTCCTG 291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 714154701569320