Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_021533.1 Length=45942 Score E Sequences producing significant alignments: (Bits) Value seq4597 104 7e-18 seq47396 84.2 6e-12 >seq4597 Length=157418 Score = 104 bits (114), Expect = 7e-18 Identities = 596/926 (64%), Gaps = 68/926 (7%) Strand=Plus/Plus Query 34448 TCGACCTCGACCGAGATGTTGGTCGTCCAGTGCGA--ACCGGT--GTCCTGC--TTGATC 34501 || |||||||| |||||||| || |||||||| | ||| || | | ||| ||||| Sbjct 124422 TCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGCCTTGCAGTTGAT- 124480 Query 34502 GTCAGGAACTGGTCGATCTGCGGGTCGTTCCAGTGCATCATCGCCATGCGCGCCGACCGG 34561 ||| | | || | |||||||| |||| |||||| ||||| ||||| ||||| Sbjct 124481 -----GAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGA 124535 Query 34562 CGCACACCGCCAGCGACGACACACTGTGCGATGGCGTGGTCGATCTCCATCGCATCCAGG 34621 || |||| || |||||||| | |||||| |||||||||||| ||| || || | | Sbjct 124536 CGTGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATG 124595 Query 34622 CCGGTGATCCGACGACCCTTGGCCGCGCTCAACACGTTCGCGGTGTTGTCGAGC-ATGAC 34680 ||||| | |||| || | ||| | | | || | | || || | | | ||| Sbjct 124596 CCGGTCAGGTGACGGCCGGTTGCCTTGTTGAGGGTGTCTGTGATGCTGACAATCGATG-T 124654 Query 34681 CGCCAGCGGCAGCGGGCCTGAGGCCGTGCCACCGAAGGTCTTCA--GCTTCGCCCCAGCG 34738 ||||| || ||||| || || || |||||||| ||||||| | | |||| | | Sbjct 124655 CGCCAAAGGTGCTGGGCCAGAAGCGGTTCCACCGAATGTCTTCAACGGTACGCC---GTG 124711 Query 34739 GGC-CGCACCCGAGACACGTCGTAGACGCGGTTGGTGTGCA-GCACGATGGTCGCGTAGA 34796 | | || |||| |||| ||||| | ||||| || | | ||| || | Sbjct 124712 TCCTCTGACATCGGACAGGTCGAAGACGAG---TCCGTGCATGCCC--TCTTCG-GTCG- 124764 Query 34797 AGGTGTCGATCAGGTCGACCAGGGCAGCCGCCCAGCCCTCACGCGAGTCCTCGATGAC-- 34854 | ||||| |||||||| | | || || ||||||||| || | |||||| | ||| Sbjct 124765 ACGTGTCAATCAGGTCCAGCCATGCTGCGACCCAGCCCTGGCGGGTGTCCTCCACGACAT 124824 Query 34855 GAAGGCACCAGCCCAGTCGGCGTCGTACTCGTCGGACAGCACGCCTGC---GTCCTTCAT 34911 || || ||| | ||||| | | || | |||| |||||| ||||| | Sbjct 124825 GAGTGCGGCAG-CTTTCCGGCG-CCTTGTCCATGAACAGGCTGCCTGCCTGCTCCTTGGT 124882 Query 34912 CGCCTGGTAGTCCGGGTGGTCCGGGTCGCAGACGATGTGGACCTTCAGCGCGTGGTTGAC 34971 || |||||||||||| | || | ||||| ||| || || || | Sbjct 124883 TGCTGCGTAGTCCGGGTG---AGACTC---GGCGATGGTGACGCCCACGAACAGGCTGCC 124936 Query 34972 C----TCCGGGTAGTCGGCCAGGAACCGGTTGCT----GTAGTTGGCACCGACGCCACCG 35023 | || | ||| |||| || | || |||| ||||||||| ||||| || ||| Sbjct 124937 CAGGATCGGCTGAGT-GGCCTTGATCAGG-TGCTGTGAGTAGTTGGCGCCGACACCGCCG 124994 Query 35024 CCTTCCATGAGGCGCATGAACG---TGAACTCGAAGTGGTCCGAGGGCTTCTCGGTCCAC 35080 || || | || || | ||| ||||| ||||||||| || ||| | | ||| Sbjct 124995 CCCTCGAACAGACG---GGACGCGAGGAACTTGAAGTGGTCACTGGTCTTTGCCGACCAT 125051 Query 35081 CCCGACACCCAGCAGTTGAACAGGTGCTGGGCGTTCTTCACG---CCCGACGCCCACAGG 35137 || || || | |||||| | | | || |||||| || | |||||||| Sbjct 125052 CCGGAGACGAAACAGTTG--CGAGAGAACGG----GTTCACGGTTCCGGTGACCCACAGG 125105 Query 35138 TGCCGGCCTGCCGGGATCATCTTGAACTCGGTGATGAGCCGGATCAGCTCTTCCCGTTCG 35197 || || || ||||||| ||||||||| | | ||| || || || || || || ||| Sbjct 125106 TGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAGATCAGGTCGAACAAATCCTCACGCTCG 125165 Query 35198 CCGTCGAG-CTGGTATCGCTCGTCGACCAGAGCGAGGTTGCCGTCCACCACCCGCTGGAC 35256 ||| | ||| | || ||| | ||||||||||| ||||| || ||| Sbjct 125166 TTCGGGAGCCAGGTTGAGGACG-GGACGTAGCCCAGGTTGCCGTCGACCACACGTGAGAC 125224 Query 35257 CGTCTCGGGCCAGGTCTCACGGCTGCCGTCAGGCTTGGTCCGTGAGTAGGTGCGGTTGTA 35316 |||||| ||| ||||| | |||||||||||| | || |||||| |||| ||| Sbjct 125225 GGTCTCGAACCATGTCTCCTTCGTACCGTCAGGCTTGATGCGACTGTAGGTCCGGTCGTA 125284 Query 35317 GACCAGCTCGCCGCTCGGCCCCCACT 35342 ||| || |||| |||| ||||||| Sbjct 125285 TACCTCCTTGCCGATCGGTCCCCACT 125310 >seq47396 Length=7053 Score = 84.2 bits (92), Expect = 6e-12 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 3883 AGGCGCGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAGCCGCTGGCTGCAGGTTCGAGT 3942 ||| ||||||||||| ||| ||||| |||||||||||| |||| || ||||||||| ||| Sbjct 4053 AGGGGCGTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGT 4112 Query 3943 CCTGCCGCGTCTGC 3956 |||| ||| |||| Sbjct 4113 CCTGTCGCCCCTGC 4126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146409469714784