Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_021535.1 Length=50679 Score E Sequences producing significant alignments: (Bits) Value seq4597 154 5e-33 seq47396 80.6 9e-11 >seq4597 Length=157418 Score = 154 bits (170), Expect = 5e-33 Identities = 598/922 (65%), Gaps = 56/922 (6%) Strand=Plus/Plus Query 34830 GTCGACCTCCACCGAGATGTTCGTCGTCCAGTGCG---ACCCGGTGTCGGCCTTGATCCC 34886 ||| ||||| || ||||||||||| |||||||| | ||| | ||||||||| Sbjct 124421 GTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAG---TCGGCCTTGCAGTT 124477 Query 34887 GACGAACCGGTCGATCTGCGGGTCGTTCCAGTGCATCATCGCCATGCGAGCCGAGCGGCG 34946 || ||| | || | |||||||| |||| |||||| ||||| || || || || || Sbjct 124478 GATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACG 124537 Query 34947 AACGCCGCCAGCGACCACACACTGCGCGATGGCGTGGTCGATCCCCATCGCCGAGATCCC 35006 | || || ||||| || | ||||||| ||||||||||| ||| ||| ||| || Sbjct 124538 TGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCC 124597 Query 35007 GTCCAGGCGCTCCCCGTCGTGGGCGATCTCGCTGAGGATCTCGCACACGTCGATCAGCAT 35066 | |||| | ||| || | || | ||||| | || | | || || Sbjct 124598 GGTCAGGTGACGGCCG--GTTG----CCTTGTTGAGGGTGTCTGTGATGCTGA----CAA 124647 Query 35067 CCGA----GCCAGAGGCAGCGGCCCCGAGGCCGTGCCGCCGAACGTCTTCAGCTTCGCGC 35122 ||| |||| ||| || || || || || || ||||| ||||||| | ||| Sbjct 124648 TCGATGTCGCCAAAGGTGCTGGGCCAGAAGCGGTTCCACCGAATGTCTTCAACGGTACGC 124707 Query 35123 CGAACTGACGGACCCGAGACACGTCGTAGACGCGCTGGAAGTGGCTGACCTCGTCCCGGT 35182 || | ||| |||| |||| ||||| | ||| || |||| | |||| Sbjct 124708 CGTGTCCTCTGACATCGGACAGGTCGAAGACG---AGTCCGTGCATGCCCTCTT--CGGT 124762 Query 35183 AGTGGGTGTCGATCAGGTCCACCAGAGCAGCGGCCCAACCCTCGCGGGAGTCCTCCACG- 35241 | ||||| |||||||||| | || ||| |||| |||| ||||| |||||||||| Sbjct 124763 CG-ACGTGTCAATCAGGTCCAGCCATGCTGCGACCCAGCCCTGGCGGGTGTCCTCCACGA 124821 Query 35242 -ATGAACGCACCAGCCCAGTCGGGGTCGTACTCCGTCGACAGGACGCCGGC---CTCCTT 35297 |||| || ||| | || || | | ||| | ||||| ||| || |||||| Sbjct 124822 CATGAGTGCGGCAG--CTTTCCGGCGCCTTGTCCATGAACAGGCTGCCTGCCTGCTCCTT 124879 Query 35298 CATCGCCTCGTAGTCCGGGTGGTCCGGGTCGCAGACGATGTGGACGTACAGCTCCTGCTG 35357 | || ||||||||||||| | | || | || | ||| |||| |||| Sbjct 124880 GGTTGCTGCGTAGTCCGGGTGAGACTCGGCGATGGTGACGCCCACGAACAG--GCTGCCC 124937 Query 35358 AACCTCCGCGTAGTCGGCCAGGAATCGGTTC---GAGTAGTTCGCCCCGACGCCGCCGCC 35414 | || || ||| |||| || ||| | |||||||| || ||||| |||||||| Sbjct 124938 AGGATCGGCTGAGT-GGCCTTGATCAGGTGCTGTGAGTAGTTGGCGCCGACACCGCCGCC 124996 Query 35415 CTCCATGAGCCGCATGAACG---TGAACTCGAAGTGGTCCGAGGGCTTCAACCCCCAGCC 35471 ||| | || || | ||| ||||| ||||||||| || ||| | ||| || Sbjct 124997 CTCGAACAGACG---GGACGCGAGGAACTTGAAGTGGTCACTGGTCTTTGCCGACCATCC 125053 Query 35472 CGAGACCCAGCAGTTGAAGAGGTGCTGGGCGTTCTTCACG---CCTGACGCCCACAGGTG 35528 ||||| | |||||| ||| ||| |||||| || | |||||||||| Sbjct 125054 GGAGACGAAACAGTTG-CGAGAGAACGGG-----TTCACGGTTCCGGTGACCCACAGGTG 125107 Query 35529 GCGTCCACCGGGGAGGATCTTGAAGTCCTCCATCAGCCGGATCAGATCCTCGCGCTCACC 35588 |||||| | ||||| |||||||||| | ||||| || || |||||| ||||| Sbjct 125108 GCGTCCGGCCGGGAGCATCTTGAAGTTGTAGATCAGGTCGAACAAATCCTCACGCTCGTT 125167 Query 35589 GTCGAG-GTGGTAGCGCTCGTCCACCAGCGCCAGGTTCCCGTCGACCACGCGCCGCACCG 35647 ||| ||| | | || ||| ||||||| ||||||||||| || || | Sbjct 125168 CGGGAGCCAGGTTGAGGACGGGACGTAGC-CCAGGTTGCCGTCGACCACACGTGAGACGG 125226 Query 35648 TTTCCGGCCAGGTCTCCTTAGACCCGTCGGGCTTGGTCCGGGAGTAGGTCCGGTTGTAGA 35707 | || ||| |||||||| | ||||| |||||| | || ||||||||||| ||| | Sbjct 125227 TCTCGAACCATGTCTCCTTCGTACCGTCAGGCTTGATGCGACTGTAGGTCCGGTCGTATA 125286 Query 35708 CCAGCTCCCCTGTCGGTCCCCA 35729 || || || |||||||||| Sbjct 125287 CCTCCTTGCCGATCGGTCCCCA 125308 >seq47396 Length=7053 Score = 80.6 bits (88), Expect = 9e-11 Identities = 61/71 (86%), Gaps = 1/71 (1%) Strand=Plus/Plus Query 4017 CATAGGCACGTAGCTCAATTGGTCAGAGCAGCGGTCTCCAAAGCCGCCGGCTGCAGGTTC 4076 || ||| |||||||||| ||| ||||||||||||||||||| |||| || ||||||||| Sbjct 4050 CAGAGGGGCGTAGCTCAACTGG-CAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTC 4108 Query 4077 GAGTCCTGCCG 4087 ||||||| || Sbjct 4109 AAGTCCTGTCG 4119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 161517993112286