Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_021535.1
Length=50679
Score E
Sequences producing significant alignments: (Bits) Value
seq4597 154 5e-33
seq47396 80.6 9e-11
>seq4597
Length=157418
Score = 154 bits (170), Expect = 5e-33
Identities = 598/922 (65%), Gaps = 56/922 (6%)
Strand=Plus/Plus
Query 34830 GTCGACCTCCACCGAGATGTTCGTCGTCCAGTGCG---ACCCGGTGTCGGCCTTGATCCC 34886
||| ||||| || ||||||||||| |||||||| | ||| | |||||||||
Sbjct 124421 GTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAG---TCGGCCTTGCAGTT 124477
Query 34887 GACGAACCGGTCGATCTGCGGGTCGTTCCAGTGCATCATCGCCATGCGAGCCGAGCGGCG 34946
|| ||| | || | |||||||| |||| |||||| ||||| || || || || ||
Sbjct 124478 GATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACG 124537
Query 34947 AACGCCGCCAGCGACCACACACTGCGCGATGGCGTGGTCGATCCCCATCGCCGAGATCCC 35006
| || || ||||| || | ||||||| ||||||||||| ||| ||| ||| ||
Sbjct 124538 TGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCC 124597
Query 35007 GTCCAGGCGCTCCCCGTCGTGGGCGATCTCGCTGAGGATCTCGCACACGTCGATCAGCAT 35066
| |||| | ||| || | || | ||||| | || | | || ||
Sbjct 124598 GGTCAGGTGACGGCCG--GTTG----CCTTGTTGAGGGTGTCTGTGATGCTGA----CAA 124647
Query 35067 CCGA----GCCAGAGGCAGCGGCCCCGAGGCCGTGCCGCCGAACGTCTTCAGCTTCGCGC 35122
||| |||| ||| || || || || || || ||||| ||||||| | |||
Sbjct 124648 TCGATGTCGCCAAAGGTGCTGGGCCAGAAGCGGTTCCACCGAATGTCTTCAACGGTACGC 124707
Query 35123 CGAACTGACGGACCCGAGACACGTCGTAGACGCGCTGGAAGTGGCTGACCTCGTCCCGGT 35182
|| | ||| |||| |||| ||||| | ||| || |||| | ||||
Sbjct 124708 CGTGTCCTCTGACATCGGACAGGTCGAAGACG---AGTCCGTGCATGCCCTCTT--CGGT 124762
Query 35183 AGTGGGTGTCGATCAGGTCCACCAGAGCAGCGGCCCAACCCTCGCGGGAGTCCTCCACG- 35241
| ||||| |||||||||| | || ||| |||| |||| ||||| ||||||||||
Sbjct 124763 CG-ACGTGTCAATCAGGTCCAGCCATGCTGCGACCCAGCCCTGGCGGGTGTCCTCCACGA 124821
Query 35242 -ATGAACGCACCAGCCCAGTCGGGGTCGTACTCCGTCGACAGGACGCCGGC---CTCCTT 35297
|||| || ||| | || || | | ||| | ||||| ||| || ||||||
Sbjct 124822 CATGAGTGCGGCAG--CTTTCCGGCGCCTTGTCCATGAACAGGCTGCCTGCCTGCTCCTT 124879
Query 35298 CATCGCCTCGTAGTCCGGGTGGTCCGGGTCGCAGACGATGTGGACGTACAGCTCCTGCTG 35357
| || ||||||||||||| | | || | || | ||| |||| ||||
Sbjct 124880 GGTTGCTGCGTAGTCCGGGTGAGACTCGGCGATGGTGACGCCCACGAACAG--GCTGCCC 124937
Query 35358 AACCTCCGCGTAGTCGGCCAGGAATCGGTTC---GAGTAGTTCGCCCCGACGCCGCCGCC 35414
| || || ||| |||| || ||| | |||||||| || ||||| ||||||||
Sbjct 124938 AGGATCGGCTGAGT-GGCCTTGATCAGGTGCTGTGAGTAGTTGGCGCCGACACCGCCGCC 124996
Query 35415 CTCCATGAGCCGCATGAACG---TGAACTCGAAGTGGTCCGAGGGCTTCAACCCCCAGCC 35471
||| | || || | ||| ||||| ||||||||| || ||| | ||| ||
Sbjct 124997 CTCGAACAGACG---GGACGCGAGGAACTTGAAGTGGTCACTGGTCTTTGCCGACCATCC 125053
Query 35472 CGAGACCCAGCAGTTGAAGAGGTGCTGGGCGTTCTTCACG---CCTGACGCCCACAGGTG 35528
||||| | |||||| ||| ||| |||||| || | ||||||||||
Sbjct 125054 GGAGACGAAACAGTTG-CGAGAGAACGGG-----TTCACGGTTCCGGTGACCCACAGGTG 125107
Query 35529 GCGTCCACCGGGGAGGATCTTGAAGTCCTCCATCAGCCGGATCAGATCCTCGCGCTCACC 35588
|||||| | ||||| |||||||||| | ||||| || || |||||| |||||
Sbjct 125108 GCGTCCGGCCGGGAGCATCTTGAAGTTGTAGATCAGGTCGAACAAATCCTCACGCTCGTT 125167
Query 35589 GTCGAG-GTGGTAGCGCTCGTCCACCAGCGCCAGGTTCCCGTCGACCACGCGCCGCACCG 35647
||| ||| | | || ||| ||||||| ||||||||||| || || |
Sbjct 125168 CGGGAGCCAGGTTGAGGACGGGACGTAGC-CCAGGTTGCCGTCGACCACACGTGAGACGG 125226
Query 35648 TTTCCGGCCAGGTCTCCTTAGACCCGTCGGGCTTGGTCCGGGAGTAGGTCCGGTTGTAGA 35707
| || ||| |||||||| | ||||| |||||| | || ||||||||||| ||| |
Sbjct 125227 TCTCGAACCATGTCTCCTTCGTACCGTCAGGCTTGATGCGACTGTAGGTCCGGTCGTATA 125286
Query 35708 CCAGCTCCCCTGTCGGTCCCCA 35729
|| || || ||||||||||
Sbjct 125287 CCTCCTTGCCGATCGGTCCCCA 125308
>seq47396
Length=7053
Score = 80.6 bits (88), Expect = 9e-11
Identities = 61/71 (86%), Gaps = 1/71 (1%)
Strand=Plus/Plus
Query 4017 CATAGGCACGTAGCTCAATTGGTCAGAGCAGCGGTCTCCAAAGCCGCCGGCTGCAGGTTC 4076
|| ||| |||||||||| ||| ||||||||||||||||||| |||| || |||||||||
Sbjct 4050 CAGAGGGGCGTAGCTCAACTGG-CAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTC 4108
Query 4077 GAGTCCTGCCG 4087
||||||| ||
Sbjct 4109 AAGTCCTGTCG 4119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 161517993112286
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |