Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq36828 91.5 2e-13 seq235844 89.7 6e-13 seq222154 86.0 7e-12 >seq36828 Length=6619 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 9773 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT 9832 |||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 4121 GGGGCCTTAGCTCAATTGGTAGAGCGCCTGCTTTGCAAGCAGGAGGTCAGGGGTTCGATT 4062 Query 9833 CCGCTATTCTCCA 9845 || ||| ||||| Sbjct 4061 CCCCTAGGCTCCA 4049 >seq235844 Length=520 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 148131 CGGGGTGTAGCTTAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAA 148190 ||||| || || ||| |||||| ||||| ||||||||||||||||||||||||||| || Sbjct 279 CGGGGCGTGGCGCAGCCTGGTAGCGCGCCTGCTTTGGGAGCGGGAGGTCGCAGGTTCGAA 220 Query 148191 TCCTGCCACCCCGA 148204 ||||| | |||||| Sbjct 219 TCCTGTCGCCCCGA 206 >seq222154 Length=451 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 9773 GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 9831 ||||||||||||||| ||| |||||||||||| ||||| |||||| |||| ||||||| Sbjct 64 GGGGAATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAAGGGTTCGAC 123 Query 9832 TCCGCTATTCTCCA 9845 ||| ||||||||| Sbjct 124 TCCCTTATTCTCCA 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547718762206760