Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_021560.1 Length=53102 Score E Sequences producing significant alignments: (Bits) Value seq230102 84.2 7e-12 >seq230102 Length=351 Score = 84.2 bits (92), Expect = 7e-12 Identities = 152/216 (70%), Gaps = 20/216 (9%) Strand=Plus/Minus Query 28523 GCGCTGCCGGCATCAGGATTGGTCAC-GAGAAGCTTCAGGGTGCCTTCGGAGAAGTGGAA 28581 |||||||||| ||| || ||| |||| |||| | ||| ||| || || | || Sbjct 233 GCGCTGCCGGAATCCGGGTTGTTCACTGAGAGGGCG-AGGCGGCCCTCCTGGACGGCGAG 175 Query 28582 CTTCATCGCCCGGCCGCGCTCGGTTGAAACCGACGACACACGGTCAACGGCCGAGGCGAT 28641 ||||| ||| ||||||||||||| || | | ||| || || || |||||| ||||| Sbjct 174 CTTCACCGCACGGCCGCGCTCGGACGAGATGGTCGAGACGCGATCGACGGCCTTGGCGAA 115 Query 28642 TGCTTTGGCGTCCGCCGTCACGTCGGTG--GCATT----GTT---GGCTGGGATGACCCG 28692 ||||||| || | || ||||| ||| | ||| ||| |||||||| || Sbjct 114 ------GGCGTCC--CG-CTCGACGGTGAGGCACTTGTCGTTCCCGGCGGGGATGACGCG 64 Query 28693 GACGTAGTCCGGGAACGTGCCGTCGATCAGTTTCGA 28728 |||||| ||||| |||||||||||||| ||||| Sbjct 63 CTGGTAGTCGGGGAAGGTGCCGTCGATCAGCTTCGA 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169246080972144