Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_022052.1 Length=76050 Score E Sequences producing significant alignments: (Bits) Value seq122612 91.5 7e-14 seq153771 86.0 3e-12 >seq122612 Length=1536 Score = 91.5 bits (100), Expect = 7e-14 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 64724 TAGCTCAGTTGGTAGAGCAGCCGACTCTTAATCGGCGGGTCGGGGGTTCAAGTCCCTCAC 64783 ||||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||| | Sbjct 1469 TAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGGGTTCGGGGTTCGAGTCCCTGAT 1528 Query 64784 GGCGCACT 64791 |||||||| Sbjct 1529 GGCGCACT 1536 >seq153771 Length=831 Score = 86.0 bits (94), Expect = 3e-12 Identities = 198/294 (67%), Gaps = 11/294 (4%) Strand=Plus/Minus Query 55442 GGCAACCTCACCGCTGATCCGGAACTGAGGTTCTTGGACTCTGGCGTGGCGGTCGCTCAG 55501 ||||||||| || || || || ||| ||||| | ||| |||| || ||||| | Sbjct 416 GGCAACCTCGTCGACGACCCCGAGCTGCGGTTCACGCCCTCGGGCGCCGCAGTCGCCAAC 357 Query 55502 TTCTCGGTGGCGTCTACTCCCCGCAAGTTCAACAAGCAGACGAACGAGTGGGAGGACGGC 55561 ||| | || || || || |||| ||||||| ||||| ||||| ||||||||||| Sbjct 356 TTCCGCATCGCCTCCACCCCGCGCACGTTCAACCGTCAGACCAACGACTGGGAGGACGGT 297 Query 55562 GAAACCGTGTTCCTC-CGTACGTCGGTGTGGCGTGAGCTTGCAGAGGGCGCGGCTGAGAA 55620 || | |||||||| | | | |||||||||||| || || ||| || || ||| Sbjct 296 GAGGGCATGTTCCTCACCTGC-TCGGTGTGGCGTCAGGCGGCCGAGAACGTCGCGGAGTC 238 Query 55621 CCTGCGTAAGGGTGACA---ACGTTGTCGTGATCGGCAACCTTAAGCAGCGCGCCTACGA 55677 | ||| || | | || ||| ||||| || || ||| |||| ||||||| Sbjct 237 CTTGC---AGCGCGGCATGCGCGTCGTCGTCCAGGGACGGCTCAAGTCGCGCACCTACGA 181 Query 55678 GA---AGGACGGCCAGACTCGGACCGTCTTTGAGATTGACGGCGAGTTCGTCGG 55728 || || ||| ||| || |||||||| ||||| || | |||| ||||| Sbjct 180 GACCCGCGAGGGCGAGAAGCGCACCGTCTTCGAGATCGAGGTCGAGGAGGTCGG 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242413807119393