Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_022056.1 Length=57155 Score E Sequences producing significant alignments: (Bits) Value seq232712 183 1e-41 >seq232712 Length=770 Score = 183 bits (202), Expect = 1e-41 Identities = 169/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 43485 CATCAACCAGCTGCGACCGGGCGTCGTGGTGATCGAGAACGTAAGGGGGTTGCTCAGTGC 43544 ||||| ||| || |||||| || |||||| ||||| || || |||||| |||||||||| Sbjct 215 CATCACCCACCTCCGACCGCGCTACGTGGTCATCGAAAATGTCAGGGGGCTGCTCAGTGC 156 Query 43545 AAGGGCATATCGCGCAATGGAATCCGAAGAGGCAGCTGTGGGAGACGGAGCAGATGGACC 43604 | || ||||| || |||||||||| | | | |||||||| | | |||| Sbjct 155 CCGAGCCCATCGCCCAGTGGAATCCGAGTCGAATGGTCTGGGAGACCACGACTCTCGACC 96 Query 43605 TGTTCTCCGGGCACTCGGTGCCGTACTCGGAGACCTTTCCGACCTCGGGTATGACGCGCA 43664 ||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 95 TGTTCTCCGAGCACTCGGAGCCGTACTCGGAGACCTTTCCGACATCGGGTATGACGCGCA 36 Query 43665 ATGGACGACTGTTGCCGCTTCCGCAGTCGGCGCC 43698 ||| |||||| |||| ||||| |||| |||| Sbjct 35 GTGGGTCACTGTTCCCGCCTCCGCCGTCGACGCC 2 Score = 95.1 bits (104), Expect = 4e-15 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 43196 TCGGTTCGCTGTTCTCCGGCGCTGGTGGCCTCGACATCGCCGTCGAGCAGTTCTTCGGCG 43255 |||| || || ||||| || || ||||||||| |||| ||| ||||||||| | Sbjct 448 TCGGATCACTCTTCTCGGGGTACGGCGGCCTCGACCTCGCGTGTGAGGCGTTCTTCGGTG 389 Query 43256 CCCGCACGGTGTGGCATTGCGAGCTGAACCCGGCCGCGTCCAAGGTGCTCGCGCACCGCT 43315 | || | ||||| ||| | |||| || ||||| | | ||||| |||| || Sbjct 388 CGACGACCGCATGGCACGCCGACATCGACCCTGCTGCGTCGCGGATCCTCGCCCACCACT 329 Query 43316 GGCCCGGTGTGCCGAACCTCGGCGACATCACCGCGGTCGACTGGTCAGAAGTCGAGCCGG 43375 |||| |||||||||| ||||||||||||||| |||||||| | | ||||| || | Sbjct 328 GGCCGACCGTGCCGAACCACGGCGACATCACCGCCATCGACTGGACTGCGGTCGAACCAG 269 Query 43376 TCGACATTCTCGCTGGCGGATTTCC 43400 | ||| | || | ||||| || || Sbjct 268 TGGACGTGATCACCGGCGGGTTCCC 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182173006310982