Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_022058.1
Length=52519
Score E
Sequences producing significant alignments: (Bits) Value
seq4597 116 1e-21
seq435 96.9 1e-15
seq151855 80.6 9e-11
>seq4597
Length=157418
Score = 116 bits (128), Expect = 1e-21
Identities = 240/353 (68%), Gaps = 7/353 (2%)
Strand=Plus/Plus
Query 33600 CTCACCGCACGGGTTCGTACAGATGACCTGGTTCGGCTCACCGACGTTCGACAGCGACGA 33659
||||||||||||||| || | || | || |||||||||| | ||| ||
Sbjct 124256 CTCACCGCACGGGTTAGTGGCGTAGATCCGGACCGGCTCACCGTAGGAGTGCAGGTCCGT 124315
Query 33660 GTCCCACATCCCCGGCTCACCGTTG-CGGACAGCGCCCTGTGAGAGGGCGTCCATCACGT 33718
||| ||| ||||||||||||||| | | || ||| | | |||||||| |||
Sbjct 124316 GTCGATCATGCCCGGCTCACCGTTGGCCGCCAT-GCCAGCAGCTACGGCGTCCAGGACGG 124374
Query 33719 CGTGGGCCTGAGACTC-CGACGGGCTCTTGACCTCCCGCCAGAACTGATCGTCCACCTCG 33777
||| ||| || | || | | ||| || || |||| | ||||| ||||||
Sbjct 124375 CGTTGGCGTGCGGGTCACCAGCGGCA----ACGGCCTTGGTGAACCGGTCGTCTACCTCG 124430
Query 33778 ACGGAGATGTTCGTCGTCCAGTGATCGCCCGACTCCGACTTGCAGTTGATGAACTCGGTG 33837
|||||||||||||| ||||||||| | | | || | ||||||||||||||| ||| |
Sbjct 124431 ACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGCCTTGCAGTTGATGAAGTCGAAG 124490
Query 33838 ATCTGCGGATCGGCCCAGTGCATCATCGACATCCGAGCTGACCGGCGAACGCCGCCGGCC 33897
| | ||| ||| ||||| |||||| | ||| || || ||||| || | || || ||
Sbjct 124491 ACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACGTGCACCACCTGCG 124550
Query 33898 ACCACGCACTGTGCAATCGCGTGATCGACCGTCATGGCATCCAGCCCGGTGAG 33950
|| ||| | || || |||| |||| | |||||| || | ||||| ||
Sbjct 124551 ACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCCGGTCAG 124603
>seq435
Length=5833
Score = 96.9 bits (106), Expect = 1e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 4239 GGGGCAGTAGCTCAGTCGGT-AGAGCTGCGGACTCTTAATCCGTAGGTCGCAGGTTCGAT 4297
||||| |||||||||||||| ||||| |||||||| ||||||||||||||| |||||||
Sbjct 4776 GGGGCGGTAGCTCAGTCGGTTAGAGCCGCGGACTCATAATCCGTAGGTCGCGGGTTCGAG 4717
Query 4298 CCCTGCCTGCCCCAC 4312
||| ||| |||||||
Sbjct 4716 CCCCGCCCGCCCCAC 4702
>seq151855
Length=841
Score = 80.6 bits (88), Expect = 9e-11
Identities = 50/54 (93%), Gaps = 0/54 (0%)
Strand=Plus/Minus
Query 25299 AGAGACCCATTCTTCCAAACTAGCTACGCGGGTTCGATTCCCGTCGCCCGCTCC 25352
|||| || | ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 822 AGAGCCCTAGTCTTCCAAACTAGCTACGCGGGTTCGATTCCCGTCACCCGCTCC 769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 167386619468926
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |