Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_022058.1 Length=52519 Score E Sequences producing significant alignments: (Bits) Value seq4597 116 1e-21 seq435 96.9 1e-15 seq151855 80.6 9e-11 >seq4597 Length=157418 Score = 116 bits (128), Expect = 1e-21 Identities = 240/353 (68%), Gaps = 7/353 (2%) Strand=Plus/Plus Query 33600 CTCACCGCACGGGTTCGTACAGATGACCTGGTTCGGCTCACCGACGTTCGACAGCGACGA 33659 ||||||||||||||| || | || | || |||||||||| | ||| || Sbjct 124256 CTCACCGCACGGGTTAGTGGCGTAGATCCGGACCGGCTCACCGTAGGAGTGCAGGTCCGT 124315 Query 33660 GTCCCACATCCCCGGCTCACCGTTG-CGGACAGCGCCCTGTGAGAGGGCGTCCATCACGT 33718 ||| ||| ||||||||||||||| | | || ||| | | |||||||| ||| Sbjct 124316 GTCGATCATGCCCGGCTCACCGTTGGCCGCCAT-GCCAGCAGCTACGGCGTCCAGGACGG 124374 Query 33719 CGTGGGCCTGAGACTC-CGACGGGCTCTTGACCTCCCGCCAGAACTGATCGTCCACCTCG 33777 ||| ||| || | || | | ||| || || |||| | ||||| |||||| Sbjct 124375 CGTTGGCGTGCGGGTCACCAGCGGCA----ACGGCCTTGGTGAACCGGTCGTCTACCTCG 124430 Query 33778 ACGGAGATGTTCGTCGTCCAGTGATCGCCCGACTCCGACTTGCAGTTGATGAACTCGGTG 33837 |||||||||||||| ||||||||| | | | || | ||||||||||||||| ||| | Sbjct 124431 ACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGCCTTGCAGTTGATGAAGTCGAAG 124490 Query 33838 ATCTGCGGATCGGCCCAGTGCATCATCGACATCCGAGCTGACCGGCGAACGCCGCCGGCC 33897 | | ||| ||| ||||| |||||| | ||| || || ||||| || | || || || Sbjct 124491 ACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACGTGCACCACCTGCG 124550 Query 33898 ACCACGCACTGTGCAATCGCGTGATCGACCGTCATGGCATCCAGCCCGGTGAG 33950 || ||| | || || |||| |||| | |||||| || | ||||| || Sbjct 124551 ACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCCGGTCAG 124603 >seq435 Length=5833 Score = 96.9 bits (106), Expect = 1e-15 Identities = 67/75 (89%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 4239 GGGGCAGTAGCTCAGTCGGT-AGAGCTGCGGACTCTTAATCCGTAGGTCGCAGGTTCGAT 4297 ||||| |||||||||||||| ||||| |||||||| ||||||||||||||| ||||||| Sbjct 4776 GGGGCGGTAGCTCAGTCGGTTAGAGCCGCGGACTCATAATCCGTAGGTCGCGGGTTCGAG 4717 Query 4298 CCCTGCCTGCCCCAC 4312 ||| ||| ||||||| Sbjct 4716 CCCCGCCCGCCCCAC 4702 >seq151855 Length=841 Score = 80.6 bits (88), Expect = 9e-11 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 25299 AGAGACCCATTCTTCCAAACTAGCTACGCGGGTTCGATTCCCGTCGCCCGCTCC 25352 |||| || | ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 822 AGAGCCCTAGTCTTCCAAACTAGCTACGCGGGTTCGATTCCCGTCACCCGCTCC 769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167386619468926