Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_022060.1 Length=54314 Score E Sequences producing significant alignments: (Bits) Value seq189415 82.4 3e-11 >seq189415 Length=2896 Score = 82.4 bits (90), Expect = 3e-11 Identities = 132/188 (70%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 36399 GTGGCGTGACCAAGCGTTGTGCTCCCAGGTCGATCCCGAGCTGTTCTTCCCCGAAAAGGG 36458 ||||| |||| ||| ||||| | ||| ||| |||||| |||||||||||| ||||| Sbjct 570 GTGGCAGGACCGGGCGCTGTGCGCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGG 511 Query 36459 AG--TAAACGCGAAACCCGCAAAGCGGATCTGCGGTATGTGCGACGTCCGGGACGAATGC 36516 | | || || | || ||||| |||||| ||||| || || || ||| Sbjct 510 CGGCTCGACCCGCGA--GGCCAAGCGCATCTGCCAGGGCTGCGAGGTGAAGGCGGAGTGC 453 Query 36517 CTTCAGTGGGCGCTGGACAACAACGAACAGTTCGGCATCTTCGGCGGCCTGTCCGAGCGT 36576 || ||| |||||| |||| |||| | |||||| |||| ||||| || |||||||| Sbjct 452 CTCGAGTACGCGCTGCACAAGGACGAGCGGTTCGGTATCTGGGGCGGTCTCTCCGAGCGG 393 Query 36577 GAACGCCG 36584 || || || Sbjct 392 GAGCGTCG 385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 173111719637496