Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_022066.1
Length=108297
Score E
Sequences producing significant alignments: (Bits) Value
seq68307 212 4e-50
seq24208 185 6e-42
seq101977 152 4e-32
>seq68307
Length=2902
Score = 212 bits (234), Expect = 4e-50
Identities = 262/358 (73%), Gaps = 3/358 (1%)
Strand=Plus/Plus
Query 94992 GACCGCCGCCTCAATCTCTCCGTCGGATACGAAAGCGCCCTGTATCCGGATGGCACCCCG 95051
|||| | ||| ||||| |||||| | ||| |||||||| |||||||||| |
Sbjct 1678 GACCACGGCCGAGATCTCCTCGTCGGTGATGAACGCGCCCTGCATCCGGATGGGGCGGTT 1737
Query 95052 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 95111
||| |||| || | ||| | ||||| ||||| || ||||||| ||| || || ||
Sbjct 1738 CGCGCCCATCGGGATGAAGAGTCCGTCGCCCATGCCGATGAGCTTCTCCGCGCCCGGCTG 1797
Query 95112 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 95171
|| ||||| || || ||||| || || | || ||||||| ||||| ||||| ||
Sbjct 1798 ATCGAGGATGACGCGCGAGTCGGTCAGCGACGACGTCGCGAACGCGAGCCGCGACGGGAC 1857
Query 95172 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 95231
||||| ||||| ||||| ||||| || || || || || ||||| ||||| || || ||
Sbjct 1858 GTTGGTCTTGATCAGGCCGGTGACGACGTCGACCGACGGTCGCTGGGTCGCGAGCACCAG 1917
Query 95232 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 95291
|| ||||| || ||||| |||||||||| ||||||||| || | ||||||| ||
Sbjct 1918 GTGGATACCCGCCGCGCGGGCCTTCTGGGTGATGCGGACGATCGCGTCCTCGACGTC--- 1974
Query 95292 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 95349
|||| || |||||||||||| ||||| |||||||| | ||| ||||||||||
Sbjct 1975 CTTGGGCGCGGTCATCATGAGGTCGGCGAGCTCGTCGACGATGGCCAGGATGTAGGGG 2032
Score = 138 bits (152), Expect = 8e-28
Identities = 136/176 (77%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 95476 AGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGC 95535
|| || ||||| || | ||| || || ||||| ||||||||||||||||| | ||| | |
Sbjct 2219 AGATGCGGGATGCCCTCGTACGGCGTCAGTTCGACCATCTTCGGGTCGATGAGGATCATC 2278
Query 95536 TTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTG 95595
||| || || | || ||| |||| || |||| ||||||||| | |||||||
Sbjct 2279 CGGACGTCGTCCGGGGTCGCCCGGGTCAGCAGTGACACCAACATCGAGTTCACGAAGCTG 2338
Query 95596 GACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTTGGCCAGGTT 95651
||||||||||| ||||||| ||| || || |||||||||||||| ||||| |||||
Sbjct 2339 GACTTGCCCGAACCGGTGGAGCCGGCGACGAGCAGGTGGGGCATCTTGGCGAGGTT 2394
>seq24208
Length=1566
Score = 185 bits (204), Expect = 6e-42
Identities = 221/298 (74%), Gaps = 3/298 (1%)
Strand=Plus/Plus
Query 95052 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 95111
|||||||| || ||||| | |||||| ||| || | |||| |||||| || ||
Sbjct 431 CGCCCCCATCGGGAGGAACAGCCCGTCGCCCTGGCCGACCAGCTTCTCGGCGCCCGGCTG 490
Query 95112 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 95171
||| ||||| |||||||| ||| ||| | |||||||| | ||| | ||||||||
Sbjct 491 GTCGAGGATGACCCGGCTGTCGCCGAGGCTCGACGTGGCGAAGGCGAGTCGCGACGGCAC 550
Query 95172 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 95231
||||| ||||| || || || || |||||||| || |||||||||||||| || |||||
Sbjct 551 GTTGGCCTTGATCAGACCCGTCACCACATCCACCGACGGCCGCTGCGTCGCGAGCACGAG 610
Query 95232 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 95291
|| || ||||| |||||||| ||||| |||||| || || ||||||| ||
Sbjct 611 GTGGATGCCGGCGGCGCGCGCGAGCTGGGTGATGCGCACGATCGACTCCTCGACGTC--G 668
Query 95292 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 95349
| | | || ||||||| ||||| || || ||||||||||| |||| || |||||||
Sbjct 669 CGCGGCG-CGACCATCATCAGGTCGGCCAGCTCGTCGACCACGACCAGGAGGTAGGGG 725
Score = 93.3 bits (102), Expect = 3e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 95577 CATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGG 95636
|||||||||||||||||| |||||||| |||||||||| ||| || || |||||||| ||
Sbjct 1013 CATCGAGTTGATGAAGCTCGACTTGCCGGATCCGGTGGAGCCGGCGACGAGCAGGTGCGG 1072
Query 95637 CATTTTGGCCAGGTTC 95652
||| || || ||||||
Sbjct 1073 CATCTTCGCGAGGTTC 1088
>seq101977
Length=1174
Score = 152 bits (168), Expect = 4e-32
Identities = 189/254 (74%), Gaps = 5/254 (2%)
Strand=Plus/Plus
Query 95097 CTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCGGTGAGTGATGCTG-TGGCGAACG 95155
|||||| || || ||| ||||| || || || ||||| || || |||| ||||||| |
Sbjct 3 CTCGGCGCCCGGCTGGTCGAGGATGACGCGACTGTCGGTCAGCGA-GCTGGTGGCGAAGG 61
Query 95156 AGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCT 95215
| || | || |||||||||| ||||| || || ||||| || || ||||||||||| |
Sbjct 62 ACAGTCGGGAGGGCACGTTGGTCTTGATCAGACCGGTGACGACGTCGACGGAGGGCCGTT 121
Query 95216 GCGTCGCCAGGACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGT 95275
| || || ||||| || || || ||||| || || |||||||||| ||| ||||| ||
Sbjct 122 GGGTGGCGAGGACCAGGTGGATCCCGGCGGCCCGGGCCTTCTGGGTGATCCGGACGATCG 181
Query 95276 TGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTA 95335
| ||||||| || | | ||||| |||||| ||||| ||||| ||||||| |
Sbjct 182 CGTCCTCGACGTC--CCGCGGAGCCG-TCATCATCAGGTCGGCGAGCTCGTCGATGATCC 238
Query 95336 CCACGATGTAGGGG 95349
||| |||||| |||
Sbjct 239 CCAGGATGTACGGG 252
Score = 143 bits (158), Expect = 2e-29
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 95452 GGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACC 95511
|||| ||||| | ||| || ||||| ||||| || | ||| || ||||| || |||
Sbjct 415 GGCTGGGTGATGATCGGGGTCAGCAGGTGCGGGATGCCCTCGTACGGCGTGAGCTCGACC 474
Query 95512 ATCTTCGGGTCGATCATGATGAGCTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAA 95571
||||| |||||||||| | | | |||| | || ||| || | |||| ||
Sbjct 475 ATCTTGGGGTCGATCAGCACCATCCGGACCTCGGCCGGCGAGGCCCGCTGCAGCAGCGAG 534
Query 95572 ACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGG 95631
|||||||||||||| | ||||||||||||||| || ||||||||||| ||||||||||||
Sbjct 535 ACCAGCATCGAGTTCACGAAGCTGGACTTGCCGGAACCGGTGGCGCCGGCCACCAGCAGG 594
Query 95632 TGGGGCATTTTGGCCAGGTTCA 95653
|| || | |||||||||||||
Sbjct 595 TGCGGGGTCTTGGCCAGGTTCA 616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 345255738394854
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |