Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_022066.1 Length=108297 Score E Sequences producing significant alignments: (Bits) Value seq68307 212 4e-50 seq24208 185 6e-42 seq101977 152 4e-32 >seq68307 Length=2902 Score = 212 bits (234), Expect = 4e-50 Identities = 262/358 (73%), Gaps = 3/358 (1%) Strand=Plus/Plus Query 94992 GACCGCCGCCTCAATCTCTCCGTCGGATACGAAAGCGCCCTGTATCCGGATGGCACCCCG 95051 |||| | ||| ||||| |||||| | ||| |||||||| |||||||||| | Sbjct 1678 GACCACGGCCGAGATCTCCTCGTCGGTGATGAACGCGCCCTGCATCCGGATGGGGCGGTT 1737 Query 95052 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 95111 ||| |||| || | ||| | ||||| ||||| || ||||||| ||| || || || Sbjct 1738 CGCGCCCATCGGGATGAAGAGTCCGTCGCCCATGCCGATGAGCTTCTCCGCGCCCGGCTG 1797 Query 95112 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 95171 || ||||| || || ||||| || || | || ||||||| ||||| ||||| || Sbjct 1798 ATCGAGGATGACGCGCGAGTCGGTCAGCGACGACGTCGCGAACGCGAGCCGCGACGGGAC 1857 Query 95172 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 95231 ||||| ||||| ||||| ||||| || || || || || ||||| ||||| || || || Sbjct 1858 GTTGGTCTTGATCAGGCCGGTGACGACGTCGACCGACGGTCGCTGGGTCGCGAGCACCAG 1917 Query 95232 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 95291 || ||||| || ||||| |||||||||| ||||||||| || | ||||||| || Sbjct 1918 GTGGATACCCGCCGCGCGGGCCTTCTGGGTGATGCGGACGATCGCGTCCTCGACGTC--- 1974 Query 95292 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 95349 |||| || |||||||||||| ||||| |||||||| | ||| |||||||||| Sbjct 1975 CTTGGGCGCGGTCATCATGAGGTCGGCGAGCTCGTCGACGATGGCCAGGATGTAGGGG 2032 Score = 138 bits (152), Expect = 8e-28 Identities = 136/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 95476 AGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGC 95535 || || ||||| || | ||| || || ||||| ||||||||||||||||| | ||| | | Sbjct 2219 AGATGCGGGATGCCCTCGTACGGCGTCAGTTCGACCATCTTCGGGTCGATGAGGATCATC 2278 Query 95536 TTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTG 95595 ||| || || | || ||| |||| || |||| ||||||||| | ||||||| Sbjct 2279 CGGACGTCGTCCGGGGTCGCCCGGGTCAGCAGTGACACCAACATCGAGTTCACGAAGCTG 2338 Query 95596 GACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTTGGCCAGGTT 95651 ||||||||||| ||||||| ||| || || |||||||||||||| ||||| ||||| Sbjct 2339 GACTTGCCCGAACCGGTGGAGCCGGCGACGAGCAGGTGGGGCATCTTGGCGAGGTT 2394 >seq24208 Length=1566 Score = 185 bits (204), Expect = 6e-42 Identities = 221/298 (74%), Gaps = 3/298 (1%) Strand=Plus/Plus Query 95052 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 95111 |||||||| || ||||| | |||||| ||| || | |||| |||||| || || Sbjct 431 CGCCCCCATCGGGAGGAACAGCCCGTCGCCCTGGCCGACCAGCTTCTCGGCGCCCGGCTG 490 Query 95112 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 95171 ||| ||||| |||||||| ||| ||| | |||||||| | ||| | |||||||| Sbjct 491 GTCGAGGATGACCCGGCTGTCGCCGAGGCTCGACGTGGCGAAGGCGAGTCGCGACGGCAC 550 Query 95172 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 95231 ||||| ||||| || || || || |||||||| || |||||||||||||| || ||||| Sbjct 551 GTTGGCCTTGATCAGACCCGTCACCACATCCACCGACGGCCGCTGCGTCGCGAGCACGAG 610 Query 95232 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 95291 || || ||||| |||||||| ||||| |||||| || || ||||||| || Sbjct 611 GTGGATGCCGGCGGCGCGCGCGAGCTGGGTGATGCGCACGATCGACTCCTCGACGTC--G 668 Query 95292 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 95349 | | | || ||||||| ||||| || || ||||||||||| |||| || ||||||| Sbjct 669 CGCGGCG-CGACCATCATCAGGTCGGCCAGCTCGTCGACCACGACCAGGAGGTAGGGG 725 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 95577 CATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGG 95636 |||||||||||||||||| |||||||| |||||||||| ||| || || |||||||| || Sbjct 1013 CATCGAGTTGATGAAGCTCGACTTGCCGGATCCGGTGGAGCCGGCGACGAGCAGGTGCGG 1072 Query 95637 CATTTTGGCCAGGTTC 95652 ||| || || |||||| Sbjct 1073 CATCTTCGCGAGGTTC 1088 >seq101977 Length=1174 Score = 152 bits (168), Expect = 4e-32 Identities = 189/254 (74%), Gaps = 5/254 (2%) Strand=Plus/Plus Query 95097 CTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCGGTGAGTGATGCTG-TGGCGAACG 95155 |||||| || || ||| ||||| || || || ||||| || || |||| ||||||| | Sbjct 3 CTCGGCGCCCGGCTGGTCGAGGATGACGCGACTGTCGGTCAGCGA-GCTGGTGGCGAAGG 61 Query 95156 AGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCT 95215 | || | || |||||||||| ||||| || || ||||| || || ||||||||||| | Sbjct 62 ACAGTCGGGAGGGCACGTTGGTCTTGATCAGACCGGTGACGACGTCGACGGAGGGCCGTT 121 Query 95216 GCGTCGCCAGGACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGT 95275 | || || ||||| || || || ||||| || || |||||||||| ||| ||||| || Sbjct 122 GGGTGGCGAGGACCAGGTGGATCCCGGCGGCCCGGGCCTTCTGGGTGATCCGGACGATCG 181 Query 95276 TGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTA 95335 | ||||||| || | | ||||| |||||| ||||| ||||| ||||||| | Sbjct 182 CGTCCTCGACGTC--CCGCGGAGCCG-TCATCATCAGGTCGGCGAGCTCGTCGATGATCC 238 Query 95336 CCACGATGTAGGGG 95349 ||| |||||| ||| Sbjct 239 CCAGGATGTACGGG 252 Score = 143 bits (158), Expect = 2e-29 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 95452 GGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACC 95511 |||| ||||| | ||| || ||||| ||||| || | ||| || ||||| || ||| Sbjct 415 GGCTGGGTGATGATCGGGGTCAGCAGGTGCGGGATGCCCTCGTACGGCGTGAGCTCGACC 474 Query 95512 ATCTTCGGGTCGATCATGATGAGCTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAA 95571 ||||| |||||||||| | | | |||| | || ||| || | |||| || Sbjct 475 ATCTTGGGGTCGATCAGCACCATCCGGACCTCGGCCGGCGAGGCCCGCTGCAGCAGCGAG 534 Query 95572 ACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGG 95631 |||||||||||||| | ||||||||||||||| || ||||||||||| |||||||||||| Sbjct 535 ACCAGCATCGAGTTCACGAAGCTGGACTTGCCGGAACCGGTGGCGCCGGCCACCAGCAGG 594 Query 95632 TGGGGCATTTTGGCCAGGTTCA 95653 || || | ||||||||||||| Sbjct 595 TGCGGGGTCTTGGCCAGGTTCA 616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345255738394854