Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_022067.1
Length=109960
Score E
Sequences producing significant alignments: (Bits) Value
seq68307 206 2e-48
seq24208 197 1e-45
seq101977 152 4e-32
seq216206 105 5e-18
seq50100 82.4 5e-11
>seq68307
Length=2902
Score = 206 bits (228), Expect = 2e-48
Identities = 261/358 (73%), Gaps = 3/358 (1%)
Strand=Plus/Plus
Query 95497 GACCGCCGCCTCAATCTCTCCGTCGGATACGAAAGCGCCCTGTATCCGGATGGCACCCCG 95556
|||| | ||| ||||| |||||| | ||| |||||||| |||||||||| |
Sbjct 1678 GACCACGGCCGAGATCTCCTCGTCGGTGATGAACGCGCCCTGCATCCGGATGGGGCGGTT 1737
Query 95557 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCACCCTC 95616
||| |||| || | ||| | ||||| ||||| || ||||||| ||| || || ||
Sbjct 1738 CGCGCCCATCGGGATGAAGAGTCCGTCGCCCATGCCGATGAGCTTCTCCGCGCCCGGCTG 1797
Query 95617 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 95676
|| ||||| || || ||||| || || | || ||||||| ||||| ||||| ||
Sbjct 1798 ATCGAGGATGACGCGCGAGTCGGTCAGCGACGACGTCGCGAACGCGAGCCGCGACGGGAC 1857
Query 95677 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 95736
||||| ||||| ||||| ||||| || || || || || ||||| ||||| || || ||
Sbjct 1858 GTTGGTCTTGATCAGGCCGGTGACGACGTCGACCGACGGTCGCTGGGTCGCGAGCACCAG 1917
Query 95737 ATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 95796
|| || || || ||||| |||||||||| ||||||||| || | ||||||| ||
Sbjct 1918 GTGGATACCCGCCGCGCGGGCCTTCTGGGTGATGCGGACGATCGCGTCCTCGACGTC--- 1974
Query 95797 CTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGGGG 95854
|||| || |||||||||||| || ||||||||||| | ||| ||||||||||
Sbjct 1975 CTTGGGCGCGGTCATCATGAGGTCGGCGAGCTCGTCGACGATGGCCAGGATGTAGGGG 2032
Score = 138 bits (152), Expect = 8e-28
Identities = 136/176 (77%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 95981 AGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGC 96040
|| || ||||| || | ||| || || ||||| ||||||||||||||||| | ||| | |
Sbjct 2219 AGATGCGGGATGCCCTCGTACGGCGTCAGTTCGACCATCTTCGGGTCGATGAGGATCATC 2278
Query 96041 TTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTG 96100
||| || || | || ||| |||| || |||| ||||||||| | |||||||
Sbjct 2279 CGGACGTCGTCCGGGGTCGCCCGGGTCAGCAGTGACACCAACATCGAGTTCACGAAGCTG 2338
Query 96101 GACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTTGGCCAGGTT 96156
||||||||||| ||||||| ||| || || |||||||||||||| ||||| |||||
Sbjct 2339 GACTTGCCCGAACCGGTGGAGCCGGCGACGAGCAGGTGGGGCATCTTGGCGAGGTT 2394
>seq24208
Length=1566
Score = 197 bits (218), Expect = 1e-45
Identities = 224/298 (75%), Gaps = 3/298 (1%)
Strand=Plus/Plus
Query 95557 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCACCCTC 95616
|||||||| || ||||| | |||||| ||| || | |||| |||||| || ||
Sbjct 431 CGCCCCCATCGGGAGGAACAGCCCGTCGCCCTGGCCGACCAGCTTCTCGGCGCCCGGCTG 490
Query 95617 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 95676
||| ||||| |||||||| ||| ||| | |||||||| | ||| | ||||||||
Sbjct 491 GTCGAGGATGACCCGGCTGTCGCCGAGGCTCGACGTGGCGAAGGCGAGTCGCGACGGCAC 550
Query 95677 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 95736
||||| ||||| || || || || |||||||| || |||||||||||||| || |||||
Sbjct 551 GTTGGCCTTGATCAGACCCGTCACCACATCCACCGACGGCCGCTGCGTCGCGAGCACGAG 610
Query 95737 ATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 95796
|| |||||||| |||||||| ||||| |||||| || || ||||||| ||
Sbjct 611 GTGGATGCCGGCGGCGCGCGCGAGCTGGGTGATGCGCACGATCGACTCCTCGACGTC--G 668
Query 95797 CTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGGGG 95854
| | | || ||||||| ||||| ||||||||||||||||| |||| || |||||||
Sbjct 669 CGCGGCG-CGACCATCATCAGGTCGGCCAGCTCGTCGACCACGACCAGGAGGTAGGGG 725
Score = 93.3 bits (102), Expect = 3e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 96082 CATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGG 96141
|||||||||||||||||| |||||||| |||||||||| ||| || || |||||||| ||
Sbjct 1013 CATCGAGTTGATGAAGCTCGACTTGCCGGATCCGGTGGAGCCGGCGACGAGCAGGTGCGG 1072
Query 96142 CATTTTGGCCAGGTTC 96157
||| || || ||||||
Sbjct 1073 CATCTTCGCGAGGTTC 1088
>seq101977
Length=1174
Score = 152 bits (168), Expect = 4e-32
Identities = 189/254 (74%), Gaps = 5/254 (2%)
Strand=Plus/Plus
Query 95602 CTCGGCTCCACCCTCGTCCAGGATCACCCGGCTATCGGTGAGTGATGCTG-TGGCGAACG 95660
|||||| || || ||| ||||| || || || ||||| || || |||| ||||||| |
Sbjct 3 CTCGGCGCCCGGCTGGTCGAGGATGACGCGACTGTCGGTCAGCGA-GCTGGTGGCGAAGG 61
Query 95661 AGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCT 95720
| || | || |||||||||| ||||| || || ||||| || || ||||||||||| |
Sbjct 62 ACAGTCGGGAGGGCACGTTGGTCTTGATCAGACCGGTGACGACGTCGACGGAGGGCCGTT 121
Query 95721 GCGTCGCCAGGACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGT 95780
| || || ||||| || || || ||||| || || |||||||||| ||| ||||| ||
Sbjct 122 GGGTGGCGAGGACCAGGTGGATCCCGGCGGCCCGGGCCTTCTGGGTGATCCGGACGATCG 181
Query 95781 TGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTA 95840
| ||||||| || | | ||||| |||||| ||||| || |||||||||| |
Sbjct 182 CGTCCTCGACGTC--CCGCGGAGCCG-TCATCATCAGGTCGGCGAGCTCGTCGATGATCC 238
Query 95841 CCACGATGTAGGGG 95854
||| |||||| |||
Sbjct 239 CCAGGATGTACGGG 252
Score = 143 bits (158), Expect = 2e-29
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 95957 GGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACC 96016
|||| ||||| | ||| || ||||| ||||| || | ||| || ||||| || |||
Sbjct 415 GGCTGGGTGATGATCGGGGTCAGCAGGTGCGGGATGCCCTCGTACGGCGTGAGCTCGACC 474
Query 96017 ATCTTCGGGTCGATCATGATGAGCTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAA 96076
||||| |||||||||| | | | |||| | || ||| || | |||| ||
Sbjct 475 ATCTTGGGGTCGATCAGCACCATCCGGACCTCGGCCGGCGAGGCCCGCTGCAGCAGCGAG 534
Query 96077 ACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGG 96136
|||||||||||||| | ||||||||||||||| || ||||||||||| ||||||||||||
Sbjct 535 ACCAGCATCGAGTTCACGAAGCTGGACTTGCCGGAACCGGTGGCGCCGGCCACCAGCAGG 594
Query 96137 TGGGGCATTTTGGCCAGGTTCA 96158
|| || | |||||||||||||
Sbjct 595 TGCGGGGTCTTGGCCAGGTTCA 616
>seq216206
Length=797
Score = 105 bits (116), Expect = 5e-18
Identities = 364/556 (65%), Gaps = 35/556 (6%)
Strand=Plus/Plus
Query 97839 GTCGAGCTTGGGGAAATCAGGCTCGCGGATCTCATCTGGCCACCGCAGCGTCTGCAACGT 97898
||||||| ||||| || | |||||| | ||| || ||| |||||||||||| |
Sbjct 4 GTCGAGCCCCGGGAACTCGGCCTCGCGCACCTCGTCGTCCCAGAGCAGCGTCTGCAGCAG 63
Query 97899 CAGAACCTCATTCTTGCCCGTCACACGCAACACCGCCAG--GTGTTCCTTGCTCCGCAGG 97956
||| ||||| | | ||| || |||| | ||||||| | || | |||| |||||
Sbjct 64 CAGCACCTCGT-CGTGC-----ACTCGCAGCGCCGCCAGCCGGGTGCGTTGC--CGCAGC 115
Query 97957 GTTACCCGTACGATGGCGACCTTG---TCGGTGTCAGAGAGCGTTCTAGCCAGCAGGGCG 98013
| | || ||||| || | || ||||| || ||||| | |||||| |||
Sbjct 116 GAGATGCGCACGATCGC---CGTGCGCTCGGTCTCCTCCAGCGTGCGGCGCAGCAGCGCG 172
Query 98014 TAGGG-----TCGCAC-GGACCCCTCGGCATTGAGGTAGTACGGGCGATCCAGCAGGATC 98067
|| | ||| | ||| || || |||||||| ||| || || |||||
Sbjct 173 TACGCCTTCATCGAGCTGGAATCCGGCGCC---AGGTAGTAACTGCGGTCGAGGCGGATC 229
Query 98068 GGGTCAACCTCGCCGGCCGGCACGAACTCCACAACGTCAATCACCTTGTTGGTTTCGCTG 98127
| || |||| | | ||||||||||| || ||||| || | | || |||
Sbjct 230 GCATCCACCTGCTCCGAGGGCACGAACTCGACGACGTCGATGTCGCGGCTGCGCTCGGCC 289
Query 98128 GGCAGCTCTGCCAAGTCCTCATTGGTCAGTAGGGCGGTTTGCCCGTCGACCTCGAACACC 98187
|||||| |||| || || ||| | || | | | || | || || | ||| | ||
Sbjct 290 GGCAGCGACGCCAGATCGTCCTTGCTGAGCACGACCGTGCGGTCGCCGTCGTCGTAGGCC 349
Query 98188 TTGCCCAGATCGGC-CGTGTGG-ACCTGCTCCCCACACGTCTCACAGACCTTG---TGGT 98242
||| | ||| || || || || ||| || || |||| || |||| ||||
Sbjct 350 TTGTC--GATGTGCTCGAAGGGCACGACCTCGCCGCAGATCTCGCA---CTTGCGCTGGT 404
Query 98243 AGCGAATCCGCCCGCCGTCCTGGACGTGCGCCAGATGGCCCTTCAGGTCGTGTTCCTCGG 98302
|||| || ||||||| ||| | | ||||| || |||| | || |||||| || || |
Sbjct 405 AGCGGATGCGCCCGCTGTCGTCGTCGTGCACCTGATGCAGCGGCACGTCGTGGTCTTCCG 464
Query 98303 TGGCCGCGTACATCTTCACCGGCACGTTGACCAACCCGAAGTTGACCGCGCCTGTCCAAA 98362
|||||| | | | ||| || ||||||||||||| ||||||| | | || ||| |||| |
Sbjct 465 TGGCCGAGAAGAGCTTGACGGGCACGTTGACCAGCCCGAAGCTCAGCGAGCCCTTCCAGA 524
Query 98363 CCGCTCTCATGCCTGC 98378
||| ||||| |||||
Sbjct 525 TCGCCCTCATTCCTGC 540
>seq50100
Length=1361
Score = 82.4 bits (90), Expect = 5e-11
Identities = 78/100 (78%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 53122 GTTCCCCACCATCACGCCTCACGACCTCCGGCACACCTGCGCATCGCTGGCCATCTCCTC 53181
||| || | | |||| || |||||||| ||||||||| || ||||| || ||||| |
Sbjct 277 GTTTCCGATCGTCACTCCGCACGACCTGCGGCACACCGCTGCCTCGCTCGCTATCTCGGC 218
Query 53182 GGGGGCCAACGTCAAGGCCGTCCAGAACCTCCTGGGGCAC 53221
||| || ||||||||||||||||||| | | || || |||
Sbjct 217 GGGCGCGAACGTCAAGGCCGTCCAGACCATGCTCGGACAC 178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 350559367622723
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |