Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq68307 206 2e-48 seq24208 197 1e-45 seq101977 152 4e-32 seq216206 105 5e-18 seq50100 82.4 5e-11 >seq68307 Length=2902 Score = 206 bits (228), Expect = 2e-48 Identities = 261/358 (73%), Gaps = 3/358 (1%) Strand=Plus/Plus Query 95497 GACCGCCGCCTCAATCTCTCCGTCGGATACGAAAGCGCCCTGTATCCGGATGGCACCCCG 95556 |||| | ||| ||||| |||||| | ||| |||||||| |||||||||| | Sbjct 1678 GACCACGGCCGAGATCTCCTCGTCGGTGATGAACGCGCCCTGCATCCGGATGGGGCGGTT 1737 Query 95557 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCACCCTC 95616 ||| |||| || | ||| | ||||| ||||| || ||||||| ||| || || || Sbjct 1738 CGCGCCCATCGGGATGAAGAGTCCGTCGCCCATGCCGATGAGCTTCTCCGCGCCCGGCTG 1797 Query 95617 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 95676 || ||||| || || ||||| || || | || ||||||| ||||| ||||| || Sbjct 1798 ATCGAGGATGACGCGCGAGTCGGTCAGCGACGACGTCGCGAACGCGAGCCGCGACGGGAC 1857 Query 95677 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 95736 ||||| ||||| ||||| ||||| || || || || || ||||| ||||| || || || Sbjct 1858 GTTGGTCTTGATCAGGCCGGTGACGACGTCGACCGACGGTCGCTGGGTCGCGAGCACCAG 1917 Query 95737 ATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 95796 || || || || ||||| |||||||||| ||||||||| || | ||||||| || Sbjct 1918 GTGGATACCCGCCGCGCGGGCCTTCTGGGTGATGCGGACGATCGCGTCCTCGACGTC--- 1974 Query 95797 CTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGGGG 95854 |||| || |||||||||||| || ||||||||||| | ||| |||||||||| Sbjct 1975 CTTGGGCGCGGTCATCATGAGGTCGGCGAGCTCGTCGACGATGGCCAGGATGTAGGGG 2032 Score = 138 bits (152), Expect = 8e-28 Identities = 136/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 95981 AGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGC 96040 || || ||||| || | ||| || || ||||| ||||||||||||||||| | ||| | | Sbjct 2219 AGATGCGGGATGCCCTCGTACGGCGTCAGTTCGACCATCTTCGGGTCGATGAGGATCATC 2278 Query 96041 TTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTG 96100 ||| || || | || ||| |||| || |||| ||||||||| | ||||||| Sbjct 2279 CGGACGTCGTCCGGGGTCGCCCGGGTCAGCAGTGACACCAACATCGAGTTCACGAAGCTG 2338 Query 96101 GACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTTGGCCAGGTT 96156 ||||||||||| ||||||| ||| || || |||||||||||||| ||||| ||||| Sbjct 2339 GACTTGCCCGAACCGGTGGAGCCGGCGACGAGCAGGTGGGGCATCTTGGCGAGGTT 2394 >seq24208 Length=1566 Score = 197 bits (218), Expect = 1e-45 Identities = 224/298 (75%), Gaps = 3/298 (1%) Strand=Plus/Plus Query 95557 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCACCCTC 95616 |||||||| || ||||| | |||||| ||| || | |||| |||||| || || Sbjct 431 CGCCCCCATCGGGAGGAACAGCCCGTCGCCCTGGCCGACCAGCTTCTCGGCGCCCGGCTG 490 Query 95617 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 95676 ||| ||||| |||||||| ||| ||| | |||||||| | ||| | |||||||| Sbjct 491 GTCGAGGATGACCCGGCTGTCGCCGAGGCTCGACGTGGCGAAGGCGAGTCGCGACGGCAC 550 Query 95677 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 95736 ||||| ||||| || || || || |||||||| || |||||||||||||| || ||||| Sbjct 551 GTTGGCCTTGATCAGACCCGTCACCACATCCACCGACGGCCGCTGCGTCGCGAGCACGAG 610 Query 95737 ATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 95796 || |||||||| |||||||| ||||| |||||| || || ||||||| || Sbjct 611 GTGGATGCCGGCGGCGCGCGCGAGCTGGGTGATGCGCACGATCGACTCCTCGACGTC--G 668 Query 95797 CTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGGGG 95854 | | | || ||||||| ||||| ||||||||||||||||| |||| || ||||||| Sbjct 669 CGCGGCG-CGACCATCATCAGGTCGGCCAGCTCGTCGACCACGACCAGGAGGTAGGGG 725 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 96082 CATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGG 96141 |||||||||||||||||| |||||||| |||||||||| ||| || || |||||||| || Sbjct 1013 CATCGAGTTGATGAAGCTCGACTTGCCGGATCCGGTGGAGCCGGCGACGAGCAGGTGCGG 1072 Query 96142 CATTTTGGCCAGGTTC 96157 ||| || || |||||| Sbjct 1073 CATCTTCGCGAGGTTC 1088 >seq101977 Length=1174 Score = 152 bits (168), Expect = 4e-32 Identities = 189/254 (74%), Gaps = 5/254 (2%) Strand=Plus/Plus Query 95602 CTCGGCTCCACCCTCGTCCAGGATCACCCGGCTATCGGTGAGTGATGCTG-TGGCGAACG 95660 |||||| || || ||| ||||| || || || ||||| || || |||| ||||||| | Sbjct 3 CTCGGCGCCCGGCTGGTCGAGGATGACGCGACTGTCGGTCAGCGA-GCTGGTGGCGAAGG 61 Query 95661 AGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCT 95720 | || | || |||||||||| ||||| || || ||||| || || ||||||||||| | Sbjct 62 ACAGTCGGGAGGGCACGTTGGTCTTGATCAGACCGGTGACGACGTCGACGGAGGGCCGTT 121 Query 95721 GCGTCGCCAGGACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGT 95780 | || || ||||| || || || ||||| || || |||||||||| ||| ||||| || Sbjct 122 GGGTGGCGAGGACCAGGTGGATCCCGGCGGCCCGGGCCTTCTGGGTGATCCGGACGATCG 181 Query 95781 TGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTA 95840 | ||||||| || | | ||||| |||||| ||||| || |||||||||| | Sbjct 182 CGTCCTCGACGTC--CCGCGGAGCCG-TCATCATCAGGTCGGCGAGCTCGTCGATGATCC 238 Query 95841 CCACGATGTAGGGG 95854 ||| |||||| ||| Sbjct 239 CCAGGATGTACGGG 252 Score = 143 bits (158), Expect = 2e-29 Identities = 153/202 (76%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 95957 GGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACC 96016 |||| ||||| | ||| || ||||| ||||| || | ||| || ||||| || ||| Sbjct 415 GGCTGGGTGATGATCGGGGTCAGCAGGTGCGGGATGCCCTCGTACGGCGTGAGCTCGACC 474 Query 96017 ATCTTCGGGTCGATCATGATGAGCTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAA 96076 ||||| |||||||||| | | | |||| | || ||| || | |||| || Sbjct 475 ATCTTGGGGTCGATCAGCACCATCCGGACCTCGGCCGGCGAGGCCCGCTGCAGCAGCGAG 534 Query 96077 ACCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGG 96136 |||||||||||||| | ||||||||||||||| || ||||||||||| |||||||||||| Sbjct 535 ACCAGCATCGAGTTCACGAAGCTGGACTTGCCGGAACCGGTGGCGCCGGCCACCAGCAGG 594 Query 96137 TGGGGCATTTTGGCCAGGTTCA 96158 || || | ||||||||||||| Sbjct 595 TGCGGGGTCTTGGCCAGGTTCA 616 >seq216206 Length=797 Score = 105 bits (116), Expect = 5e-18 Identities = 364/556 (65%), Gaps = 35/556 (6%) Strand=Plus/Plus Query 97839 GTCGAGCTTGGGGAAATCAGGCTCGCGGATCTCATCTGGCCACCGCAGCGTCTGCAACGT 97898 ||||||| ||||| || | |||||| | ||| || ||| |||||||||||| | Sbjct 4 GTCGAGCCCCGGGAACTCGGCCTCGCGCACCTCGTCGTCCCAGAGCAGCGTCTGCAGCAG 63 Query 97899 CAGAACCTCATTCTTGCCCGTCACACGCAACACCGCCAG--GTGTTCCTTGCTCCGCAGG 97956 ||| ||||| | | ||| || |||| | ||||||| | || | |||| ||||| Sbjct 64 CAGCACCTCGT-CGTGC-----ACTCGCAGCGCCGCCAGCCGGGTGCGTTGC--CGCAGC 115 Query 97957 GTTACCCGTACGATGGCGACCTTG---TCGGTGTCAGAGAGCGTTCTAGCCAGCAGGGCG 98013 | | || ||||| || | || ||||| || ||||| | |||||| ||| Sbjct 116 GAGATGCGCACGATCGC---CGTGCGCTCGGTCTCCTCCAGCGTGCGGCGCAGCAGCGCG 172 Query 98014 TAGGG-----TCGCAC-GGACCCCTCGGCATTGAGGTAGTACGGGCGATCCAGCAGGATC 98067 || | ||| | ||| || || |||||||| ||| || || ||||| Sbjct 173 TACGCCTTCATCGAGCTGGAATCCGGCGCC---AGGTAGTAACTGCGGTCGAGGCGGATC 229 Query 98068 GGGTCAACCTCGCCGGCCGGCACGAACTCCACAACGTCAATCACCTTGTTGGTTTCGCTG 98127 | || |||| | | ||||||||||| || ||||| || | | || ||| Sbjct 230 GCATCCACCTGCTCCGAGGGCACGAACTCGACGACGTCGATGTCGCGGCTGCGCTCGGCC 289 Query 98128 GGCAGCTCTGCCAAGTCCTCATTGGTCAGTAGGGCGGTTTGCCCGTCGACCTCGAACACC 98187 |||||| |||| || || ||| | || | | | || | || || | ||| | || Sbjct 290 GGCAGCGACGCCAGATCGTCCTTGCTGAGCACGACCGTGCGGTCGCCGTCGTCGTAGGCC 349 Query 98188 TTGCCCAGATCGGC-CGTGTGG-ACCTGCTCCCCACACGTCTCACAGACCTTG---TGGT 98242 ||| | ||| || || || || ||| || || |||| || |||| |||| Sbjct 350 TTGTC--GATGTGCTCGAAGGGCACGACCTCGCCGCAGATCTCGCA---CTTGCGCTGGT 404 Query 98243 AGCGAATCCGCCCGCCGTCCTGGACGTGCGCCAGATGGCCCTTCAGGTCGTGTTCCTCGG 98302 |||| || ||||||| ||| | | ||||| || |||| | || |||||| || || | Sbjct 405 AGCGGATGCGCCCGCTGTCGTCGTCGTGCACCTGATGCAGCGGCACGTCGTGGTCTTCCG 464 Query 98303 TGGCCGCGTACATCTTCACCGGCACGTTGACCAACCCGAAGTTGACCGCGCCTGTCCAAA 98362 |||||| | | | ||| || ||||||||||||| ||||||| | | || ||| |||| | Sbjct 465 TGGCCGAGAAGAGCTTGACGGGCACGTTGACCAGCCCGAAGCTCAGCGAGCCCTTCCAGA 524 Query 98363 CCGCTCTCATGCCTGC 98378 ||| ||||| ||||| Sbjct 525 TCGCCCTCATTCCTGC 540 >seq50100 Length=1361 Score = 82.4 bits (90), Expect = 5e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 53122 GTTCCCCACCATCACGCCTCACGACCTCCGGCACACCTGCGCATCGCTGGCCATCTCCTC 53181 ||| || | | |||| || |||||||| ||||||||| || ||||| || ||||| | Sbjct 277 GTTTCCGATCGTCACTCCGCACGACCTGCGGCACACCGCTGCCTCGCTCGCTATCTCGGC 218 Query 53182 GGGGGCCAACGTCAAGGCCGTCCAGAACCTCCTGGGGCAC 53221 ||| || ||||||||||||||||||| | | || || ||| Sbjct 217 GGGCGCGAACGTCAAGGCCGTCCAGACCATGCTCGGACAC 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 350559367622723