Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_022068.1 Length=58043 Score E Sequences producing significant alignments: (Bits) Value seq232712 181 4e-41 seq157980 120 1e-22 seq125305 93.3 2e-14 >seq232712 Length=770 Score = 181 bits (200), Expect = 4e-41 Identities = 189/243 (78%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 45560 CGGTTTGTGGGCCCACTACGCCGAA-GCCATCAACCAACTACGACCCCGACTGGTGGTGA 45618 |||| ||||||| ||| | || | ||||||| ||| || ||||| || ||||| | Sbjct 242 CGGTCTGTGGGCGCAC-ATGCACACCGCCATCACCCACCTCCGACCGCGCTACGTGGTCA 184 Query 45619 TCGAAAATGTCCGCGGACTGCTCTCCGCAACAGCCCACCGCGCAATGGAATCCGCAGCGC 45678 ||||||||||| | || |||||| || |||||| ||| || ||||||||| || Sbjct 183 TCGAAAATGTCAGGGGGCTGCTCAGTGCCCGAGCCCATCGCCCAGTGGAATCCGAGTCGA 124 Query 45679 CAGCTTTGGGAAACACAGGAA-CTCAGCCTGTTCTCCGAGCACTCGGAGCCGTACTCGGA 45737 | | ||||| || || || ||| ||||||||||||||||||||||||||||||||| Sbjct 123 ATGGTCTGGGAGAC-CACGACTCTCGACCTGTTCTCCGAGCACTCGGAGCCGTACTCGGA 65 Query 45738 GACCTGGCCGACATCGGGTATGACGCGCAATGGACAACTGTTGCCGCTTCCGCTGTCGGC 45797 ||||| |||||||||||||||||||||| ||| |||||| |||| ||||| |||| | Sbjct 64 GACCTTTCCGACATCGGGTATGACGCGCAGTGGGTCACTGTTCCCGCCTCCGCCGTCGAC 5 Query 45798 GCC 45800 ||| Sbjct 4 GCC 2 Score = 87.8 bits (96), Expect = 7e-13 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 45298 TCGGTTCGCTGTTCTCCGGCGCTGGCGGCCTCGACATCGCCGTCGAGCAGTTCTTCGGCG 45357 |||| || || ||||| || |||||||||||| |||| ||| ||||||||| | Sbjct 448 TCGGATCACTCTTCTCGGGGTACGGCGGCCTCGACCTCGCGTGTGAGGCGTTCTTCGGTG 389 Query 45358 CCCGCACGGTGTGGCATTGCGAGCTGAACCCGGCCGCGTCCAAGGTGCTCGCGCACCGCT 45417 | || | ||||| ||| | |||| || ||||| | | ||||| |||| || Sbjct 388 CGACGACCGCATGGCACGCCGACATCGACCCTGCTGCGTCGCGGATCCTCGCCCACCACT 329 Query 45418 GGCCCGGTGTGCCGAACCTCGGCGATATCACCGCGGTCGACTGGTCAGAAGTCGAGCCGG 45477 |||| |||||||||| |||||| |||||||| |||||||| | | ||||| || | Sbjct 328 GGCCGACCGTGCCGAACCACGGCGACATCACCGCCATCGACTGGACTGCGGTCGAACCAG 269 Query 45478 T 45478 | Sbjct 268 T 268 >seq157980 Length=2738 Score = 120 bits (132), Expect = 1e-22 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 44350 CTATGACACCGAGTTTCTCGAAGACGGCCGCACGATCGAGCTGATCTCGATCGGCATCGT 44409 ||| ||||||||||| |||||||||||| || |||| |||||||||||||||||||| Sbjct 694 CTACGACACCGAGTTCCTCGAAGACGGCAAGACCGTCGACCTGATCTCGATCGGCATCGT 635 Query 44410 GTGCGAGGACGGCCGCGAGTACTACGCCGTCAACAACGACATGGACCAGGAGCGCATCCG 44469 ||| || |||||||||||||||||| ||||| |||| ||| ||| |||||||| Sbjct 634 CGCCGAAGATGGCCGCGAGTACTACGCCATCAACTCCGACGCTGACTGGGACCGCATCCG 575 Query 44470 G 44470 | Sbjct 574 G 574 Score = 91.5 bits (100), Expect = 5e-14 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 44670 AACTCTGGGCGAACTACGCGGCGTACGACCACGTGGTCCTGGCGCAGCTGTGGGGCCGAA 44729 |||| ||||| ||||||| |||||||||||||| | ||| || ||||||| ||| | Sbjct 396 AACTGTGGGCCGACTACGCCGCGTACGACCACGTCGCCCTCGCCCAGCTGTTCGGCAAGA 337 Query 44730 TGATCTCGCTGCCCAAGGGGCTCCCGATGTTCACCCATGACCTGCAGCAGCTGCTCGAAA 44789 ||||| ||||||| || |||| |||| |||| | || | | || || ||| Sbjct 336 TGATCAAACTGCCCACCGGCATCCCCATGTACACCAACGAGATCCGCCAACTCGTCGCCC 277 Query 44790 CCATGGCCGACTTCGAGAAGCCGGAGCAGGACGGCACCGAGCACAACGCGCTCGAAGACG 44849 | ||| ||||| |||| || |||| || || |||||||||||||| |||| Sbjct 276 TCCACCCCGGATTCGACGAGCCCGAACAGGCCGAGGGCGTTCACAACGCGCTCGACGACG 217 Query 44850 CCCGG 44854 ||||| Sbjct 216 CCCGG 212 >seq125305 Length=4407 Score = 93.3 bits (102), Expect = 2e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 44350 CTATGACACCGAGTTTCTCGAAGACGGCCGCACGATCGAGCTGATCTCGATCGGCATCGT 44409 ||| ||||||||||| |||| ||||| || || ||||| ||| ||||||||||| |||| Sbjct 2005 CTACGACACCGAGTTCATCGAGGACGGGCGGACCATCGATCTGGTCTCGATCGGCGTCGT 2064 Query 44410 GTGCGAGGACGGCCGCGAGTACTACGCCGTCAACAACGACATGGACCAGGAGCG 44463 ||||||||| || |||| |||||||||| || || | |||| ||||| Sbjct 2065 CGCCGAGGACGGTCGGGAGTTCTACGCCGTCTCCACGGAGTTCGACCCCGAGCG 2118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185005256422230