Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_022096.1
Length=258139
Score E
Sequences producing significant alignments: (Bits) Value
seq180282 210 4e-49
seq272113 143 4e-29
seq159189 129 1e-24
>seq180282
Length=403
Score = 210 bits (232), Expect = 4e-49
Identities = 274/375 (73%), Gaps = 8/375 (2%)
Strand=Plus/Plus
Query 35529 AACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGTGTTG 35588
||||| | ||| | | || ||||| ||||| | ||| ||||| || |||||
Sbjct 6 AACAGGAACTGGCACGCGCCCTCGTTGGCGTAGATCTTCGCGGGCAGCGGCGTGGTGTTC 65
Query 35589 CTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATG 35648
||||||||| |||||||| || ||||| || || |||| || |||||||||||||||
Sbjct 66 GAGAACTCCAGCGTCACATGCCCCTCCCATTCGGGCTCCAATGGGGTCACGTTGACGATG 125
Query 35649 ATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATG 35708
|| ||||| ||||| ||||| ||| || | || | ||| || |||| |||||| | |
Sbjct 126 ATCCCACACCGCGCATAGGTCGACTTGCCAAGGCAGATCACCAGCACGTCGCGCGGCACG 185
Query 35709 CGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCAGGATGC---TG 35765
||||| |||||||||||||| || || ||||||||||||||||| || ||||| |
Sbjct 186 CGGAAATATTCGACCGTGCGGGCGAGCGCGAAGCTGTTCGGCGGGAT---GATGCACACG 242
Query 35766 TCAGCCTTAACCGGCTGC-AGGCACTTGGGATCGAAGTTCTTCGGATCAACCACTGCGCT 35824
|| | ||| | | | | | || |||| |||||| ||||||||| || | |||||
Sbjct 243 TCGGTCTT-GCGGTCGACGAAGCTGTTGGCGGCGAAGTCCTTCGGATCGACGATGGCGCT 301
Query 35825 GTTGATGTTGGTGAAGACTTCCCACTCATCGGCAGCACGCACGTCATAACCATACGACGA 35884
|| || |||||||||| | |||| |||||| | ||| ||||||| || || |||||
Sbjct 302 GTCGACATTGGTGAAGATCTTGAACTCGTCGGCAACGCGCGCGTCATATCCGTAGGACGA 361
Query 35885 GTTGCCGTACGAGAT 35899
|| ||||||||
Sbjct 362 CAGCCCATACGAGAT 376
>seq272113
Length=263
Score = 143 bits (158), Expect = 4e-29
Identities = 178/242 (74%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 35598 AGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATGATACCACAG 35657
|| || ||||| || ||||| | || |||||||| ||||||||||||||||| || |||
Sbjct 262 AGCGTGACATGGCCCTCCCAGCCCGGCTCCAGCGGGGTCACGTTGACGATGATGCCGCAG 203
Query 35658 CGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATGCGGAAGTAT 35717
||||| ||||| ||| || | ||| | || || |||| ||| || | |||||| ||
Sbjct 202 CGCGCATAGGTCGACTTGCCAAGACAGATGACCAGCACGTCGCGAGGTACGCGGAAATAC 143
Query 35718 TCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCAGGATGCTGTCAGCCTT--AA 35775
||||| |||||||| || |||||||||||||||||||| | | | ||| | ||| |
Sbjct 142 TCGACGGTGCGTGCAAGCGCGAAGCTGTTCGGCGGAATGATGCAGACGTCCGTCTTGCGA 83
Query 35776 CCGGCTGCAGGCACTTGGGATCGAAGTTCTTCGGATCAACCACTGCGCTGTTGATGTTGG 35835
|| | | || || || |||| | ||||||||| |||| || ||| || ||||
Sbjct 82 TCGAC--GAAGCTATTCGGGGCGAACTCCTTCGGATCGACCAAGGCATTGTCGACATTGG 25
Query 35836 TG 35837
||
Sbjct 24 TG 23
>seq159189
Length=1302
Score = 129 bits (142), Expect = 1e-24
Identities = 207/296 (70%), Gaps = 1/296 (0%)
Strand=Plus/Plus
Query 35461 CCGT-CTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGTCCTCGTCA 35519
|||| ||||||| |||||| || | ||||| ||| ||| |||||| | |
Sbjct 145 CCGTGCTGGCCCATGTATTTGCCCGCTCGATCGGCGTAACTGATCTCGCAGGGGCCAGCC 204
Query 35520 CTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGCAGGTTG 35579
| || | ||||| | ||| | |||||| || ||||| | ||||||||||||
Sbjct 205 CCCTGCAGGAACAGGAACTGGCAGATACCTTCATTGGCGTAGATGCGCGCCGGCAGGGGC 264
Query 35580 GTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACG 35639
|| || ||| | ||| | ||||| || || ||||| || ||||| || || |||||
Sbjct 265 GTGGTATTGGAAATCTCGATCGTCACCTGCCCCTCCCATTCGGGTTCGAGGGGTGTCACA 324
Query 35640 TTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTG 35699
|| |||||||| || || || || ||||| ||| || | || | ||| || ||||
Sbjct 325 TTCACGATGATGCCGCAACGGGCATAGGTCGACTTCCCGAGGCAGATCACCAGCGTGTTG 384
Query 35700 CGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAAT 35755
||||| || ||||| || |||||||| | ||||| |||||||| || || |||||
Sbjct 385 CGCGGGATACGGAAATACTCGACCGTATGAGCCAGCGCGAAGCTATTTGGGGGAAT 440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 823056206191320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |