Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq180282 210 4e-49 seq272113 143 4e-29 seq159189 129 1e-24 >seq180282 Length=403 Score = 210 bits (232), Expect = 4e-49 Identities = 274/375 (73%), Gaps = 8/375 (2%) Strand=Plus/Plus Query 35529 AACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGTGTTG 35588 ||||| | ||| | | || ||||| ||||| | ||| ||||| || ||||| Sbjct 6 AACAGGAACTGGCACGCGCCCTCGTTGGCGTAGATCTTCGCGGGCAGCGGCGTGGTGTTC 65 Query 35589 CTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATG 35648 ||||||||| |||||||| || ||||| || || |||| || ||||||||||||||| Sbjct 66 GAGAACTCCAGCGTCACATGCCCCTCCCATTCGGGCTCCAATGGGGTCACGTTGACGATG 125 Query 35649 ATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATG 35708 || ||||| ||||| ||||| ||| || | || | ||| || |||| |||||| | | Sbjct 126 ATCCCACACCGCGCATAGGTCGACTTGCCAAGGCAGATCACCAGCACGTCGCGCGGCACG 185 Query 35709 CGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCAGGATGC---TG 35765 ||||| |||||||||||||| || || ||||||||||||||||| || ||||| | Sbjct 186 CGGAAATATTCGACCGTGCGGGCGAGCGCGAAGCTGTTCGGCGGGAT---GATGCACACG 242 Query 35766 TCAGCCTTAACCGGCTGC-AGGCACTTGGGATCGAAGTTCTTCGGATCAACCACTGCGCT 35824 || | ||| | | | | | || |||| |||||| ||||||||| || | ||||| Sbjct 243 TCGGTCTT-GCGGTCGACGAAGCTGTTGGCGGCGAAGTCCTTCGGATCGACGATGGCGCT 301 Query 35825 GTTGATGTTGGTGAAGACTTCCCACTCATCGGCAGCACGCACGTCATAACCATACGACGA 35884 || || |||||||||| | |||| |||||| | ||| ||||||| || || ||||| Sbjct 302 GTCGACATTGGTGAAGATCTTGAACTCGTCGGCAACGCGCGCGTCATATCCGTAGGACGA 361 Query 35885 GTTGCCGTACGAGAT 35899 || |||||||| Sbjct 362 CAGCCCATACGAGAT 376 >seq272113 Length=263 Score = 143 bits (158), Expect = 4e-29 Identities = 178/242 (74%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 35598 AGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATGATACCACAG 35657 || || ||||| || ||||| | || |||||||| ||||||||||||||||| || ||| Sbjct 262 AGCGTGACATGGCCCTCCCAGCCCGGCTCCAGCGGGGTCACGTTGACGATGATGCCGCAG 203 Query 35658 CGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATGCGGAAGTAT 35717 ||||| ||||| ||| || | ||| | || || |||| ||| || | |||||| || Sbjct 202 CGCGCATAGGTCGACTTGCCAAGACAGATGACCAGCACGTCGCGAGGTACGCGGAAATAC 143 Query 35718 TCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCAGGATGCTGTCAGCCTT--AA 35775 ||||| |||||||| || |||||||||||||||||||| | | | ||| | ||| | Sbjct 142 TCGACGGTGCGTGCAAGCGCGAAGCTGTTCGGCGGAATGATGCAGACGTCCGTCTTGCGA 83 Query 35776 CCGGCTGCAGGCACTTGGGATCGAAGTTCTTCGGATCAACCACTGCGCTGTTGATGTTGG 35835 || | | || || || |||| | ||||||||| |||| || ||| || |||| Sbjct 82 TCGAC--GAAGCTATTCGGGGCGAACTCCTTCGGATCGACCAAGGCATTGTCGACATTGG 25 Query 35836 TG 35837 || Sbjct 24 TG 23 >seq159189 Length=1302 Score = 129 bits (142), Expect = 1e-24 Identities = 207/296 (70%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 35461 CCGT-CTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGTCCTCGTCA 35519 |||| ||||||| |||||| || | ||||| ||| ||| |||||| | | Sbjct 145 CCGTGCTGGCCCATGTATTTGCCCGCTCGATCGGCGTAACTGATCTCGCAGGGGCCAGCC 204 Query 35520 CTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGCAGGTTG 35579 | || | ||||| | ||| | |||||| || ||||| | |||||||||||| Sbjct 205 CCCTGCAGGAACAGGAACTGGCAGATACCTTCATTGGCGTAGATGCGCGCCGGCAGGGGC 264 Query 35580 GTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACG 35639 || || ||| | ||| | ||||| || || ||||| || ||||| || || ||||| Sbjct 265 GTGGTATTGGAAATCTCGATCGTCACCTGCCCCTCCCATTCGGGTTCGAGGGGTGTCACA 324 Query 35640 TTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTG 35699 || |||||||| || || || || ||||| ||| || | || | ||| || |||| Sbjct 325 TTCACGATGATGCCGCAACGGGCATAGGTCGACTTCCCGAGGCAGATCACCAGCGTGTTG 384 Query 35700 CGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAAT 35755 ||||| || ||||| || |||||||| | ||||| |||||||| || || ||||| Sbjct 385 CGCGGGATACGGAAATACTCGACCGTATGAGCCAGCGCGAAGCTATTTGGGGGAAT 440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 823056206191320