Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq28654 114 8e-21 seq76306 111 1e-19 seq27511 111 1e-19 seq41046 100 2e-16 seq27512 87.8 1e-12 >seq28654 Length=3315 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || || |||| ||| |||||| || ||||| ||||| || ||| |||| |||| Sbjct 1718 CAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTGCGACCATC 1777 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| |||||| || || ||||| || || ||||| || | || | ||||| ||||| Sbjct 1778 TTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTC 1837 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | ||||| ||| || | | || | ||| || || || || | ||| ||||| Sbjct 1838 TTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGGGTAATGGT 1897 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || ||||| || ||||| |||||||| Sbjct 1898 CTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 1930 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||| | ||| ||| |||||||| |||||||| || || | || |||| ||| Sbjct 810 ACCAAGTGCAAAGTGGACTCTTTCTGAATATTATAGTCAGAGAGAGTACGGCCATCCTCC 869 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || ||||| || || ||||| || ||| | || | ||||| ||||| | Sbjct 870 AGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGG 929 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || ||| || | | || | || || || || || | || || || || Sbjct 930 ATCTTAGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTC 989 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||||||||||||||| Sbjct 990 CCTGTCAGTGTCTTTACAAAGATCTGCAT 1018 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| || || || ||||| |||||||| || || |||| | || ||| Sbjct 2406 ACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTCTTCC 2465 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | ||||||||| ||||| |||| ||||| || ||| | || | || |||||||| | Sbjct 2466 AATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGA 2525 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||||| ||| || | | || | || | || || || | || ||||| || Sbjct 2526 ATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTTA 2585 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || || |||||||||||||| Sbjct 2586 CCCGTAAGTGTTTTCACAAAGATCTGCAT 2614 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| |||||||| || || || || | |||| |||| |||| ||||||||| || || Sbjct 1283 CTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAA 1342 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || || || || |||||| | || | |||||||| || | |||||| |||||| | Sbjct 1343 AATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGTATTTTAGCTTTGAC--A 1400 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || || | ||| | || || || | ||| ||||||||||| || | || || Sbjct 1401 TTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTG 1460 Query 34964 ACAAAGATCTGCAT 34977 ||||| || ||||| Sbjct 1461 ACAAATATTTGCAT 1474 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || |||||||||||||| || |||| |||| || | || || || || ||| Sbjct 600 TCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAG 659 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || || || |||||| | || | ||||||||||| | || || || || | Sbjct 660 ATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTT 719 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | ||| || || | || |||||||| || || || ||||| ||| Sbjct 720 TCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACA 779 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 780 AAGATCTGCAT 790 >seq76306 Length=316 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| || |||||||| || | ||||| |||| |||||||||||||||||||| Sbjct 247 TCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAA 188 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||||| ||| || ||| | || | || |||||||| | || ||| || ||| | Sbjct 187 ATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTT 128 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| || || || || | || ||||| || || || | || ||||| Sbjct 127 TCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACG 68 Query 34967 AAGATCTGCATGAT 34980 ||||| |||||||| Sbjct 67 AAGATTTGCATGAT 54 >seq27511 Length=800 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 |||| || |||| || ||| |||||||| || | || | ||||||||||| || ||||| Sbjct 673 TTCCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGAT-TCCTTCTGAATATTGTAGTCA 615 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 ||||| |||| |||| || || |||||||| || || || |||| |||||| ||| | Sbjct 614 GATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGG 555 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | ||||| || || | ||||| || || | | || | ||| || || Sbjct 554 GGAATACCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCC 495 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || || ||||| || || || ||||||||||| || ||||| Sbjct 494 ACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 445 Score = 89.7 bits (98), Expect = 3e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| || || || ||||| | || || ||||||||||| || || | Sbjct 217 TTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAG 158 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 |||| |||| |||| || || |||||||| || || || |||| |||||| ||| | | Sbjct 157 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 98 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| || || | |||||| ||| || | | || | ||| | ||| | Sbjct 97 GAATTCCCTCTTTATCCTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAA 38 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || || ||||| || || || |||||||| Sbjct 37 CTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTAC 1 >seq41046 Length=7774 Score = 100 bits (110), Expect = 2e-16 Identities = 138/192 (72%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| |||||||| ||||| || | | || |||| || ||||| || || || ||| Sbjct 7191 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 7250 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTT-TTGTTTGACGGA 34905 |||| |||||||||||| | || | || ||||| || | ||||| ||| || Sbjct 7251 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTAACATT 7310 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| | ||| |||||| || || | ||| ||||| || ||||| |||||||| || Sbjct 7311 TTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGAC 7370 Query 34966 AAAGATCTGCAT 34977 || || ||||| Sbjct 7371 GAAAATTTGCAT 7382 >seq27512 Length=242 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || |||||||| || ||||| ||||| | || |||| || || |||||||| || || Sbjct 37 TCTTTCTGAATATTGTAGTCTGATAGTGTACGTCCATCCTCAAGCTGCTTTCCAGCAAAA 96 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || | ||| |||||| | || | || ||||| || | |||||| || || | Sbjct 97 ATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATCTTGAATTTTTGCCTTAACATTT 156 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| || ||| || || | || || ||||| || || || ||||||||| Sbjct 157 TCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACA 216 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 217 AATATTTGCAT 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324592952004377