Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_022753.1 Length=52282 Score E Sequences producing significant alignments: (Bits) Value seq4597 118 4e-22 seq435 82.4 3e-11 >seq4597 Length=157418 Score = 118 bits (130), Expect = 4e-22 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 33149 TCGTCTACTTCGACTGAGATGTTCGTGGTCCAATGCGACCCCGACTCCTCTTTGATGTTG 33208 |||||||| ||||| ||||||||||||||||| || | | | || | ||| |||| Sbjct 124419 TCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGCCTTGCAGTTG 124478 Query 33209 ATGAACTCCATGATCTGAGGGTCAGCCCAGTGCATCATCGCCATACGAGCGGACCGGCGA 33268 ||||| || | || | ||||| ||||| |||||| |||||||| |||||||| || Sbjct 124479 ATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACGT 124538 Query 33269 ACTCCACCGGCCACCACACACTGCGCGATGGCGTGGTCGATCTCCATCGCGGAGATGCCG 33328 | ||||| || || || | ||||||| |||||||||||| ||| || ||||||| Sbjct 124539 GCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCCG 124598 Query 33329 TCCAGCTG 33336 ||| || Sbjct 124599 GTCAGGTG 124606 >seq435 Length=5833 Score = 82.4 bits (90), Expect = 3e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 4055 GGGGCAGTAGCTCAGTCGG-CAGAGCTACGGACTCTTAATCCGCAGGTCGCAGGTTCGAT 4113 ||||| ||||||||||||| ||||| ||||||| ||||||| ||||||| ||||||| Sbjct 4776 GGGGCGGTAGCTCAGTCGGTTAGAGCCGCGGACTCATAATCCGTAGGTCGCGGGTTCGAG 4717 Query 4114 CCCTGCCTGCCCCAC 4128 ||| ||| ||||||| Sbjct 4716 CCCCGCCCGCCCCAC 4702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166630714878424