Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq15523 176 4e-39
seq10526 149 5e-31
seq27511 107 2e-18
seq133356 104 2e-17
seq76306 100 2e-16
seq41046 87.8 1e-12
seq28654 87.8 1e-12
>seq15523
Length=5906
Score = 176 bits (194), Expect = 4e-39
Identities = 204/275 (74%), Gaps = 0/275 (0%)
Strand=Plus/Minus
Query 103796 CGCATGCCCGGCCCCGCGCACCCTCGGTTCGCCTCCGAGGCCTCAAGGTTACAAACTTTT 103855
||||||||||| |||| |||| | || | |||||||||||| | | | | | ||
Sbjct 5887 CGCATGCCCGGTCCCGTGCACGCGCGCTACGCCTCCGAGGCGGCCCGCCTGCGCAGCTTC 5828
Query 103856 AAGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTCTAC 103915
| || ||||| || ||| |||| ||||| || ||| | | |||||||| ||||||| |
Sbjct 5827 AGCGACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAAGCGGGATTCTTC 5768
Query 103916 TACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGATTGG 103975
||||||||||| | ||||| || || ||||||||||| ||||| || || ||||| |||
Sbjct 5767 TACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGACTCAAGGACTGG 5708
Query 103976 GAGCACGATGATGAGCCGTGGCAACAACACGCGCTTTTCTTTCGCCGTTGCGCATACGTG 104035
||| |||| || | ||||||| | || ||||| | | || ||| ||||| ||||||
Sbjct 5707 GAGAACGACGACGTGCCGTGGGAGCAGCACGCACGCTGGTTCGACCGGTGCGCCTACGTG 5648
Query 104036 CTACTTGTCAAGGGCCACGATTATGTACAAAAGGT 104070
| || ||||| |||| || || || || |||||
Sbjct 5647 CAGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGT 5613
>seq10526
Length=5062
Score = 149 bits (164), Expect = 5e-31
Identities = 329/492 (67%), Gaps = 6/492 (1%)
Strand=Plus/Minus
Query 29072 TGCGTATTTTGTAGAATGGGGCGTATATGGCCGCAACTTTCCGGTAGACAAAGTGCCGCT 29131
||| || || ||||||||||| || ||| | || || || || || | || |
Sbjct 4121 TGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTAT 4062
Query 29132 GCCCAACCTCTCGCATCTGTTGTACGGTTTCATACCTATTTGCGGCGGCGACGGGCTCAA 29191
|| || || | ||| || | ||||| || || || ||||||||||| ||||| | ||
Sbjct 4061 ACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATTAA 4002
Query 29192 CGACGCCCTCAAAACCATTCCCGGCAGTTTTGAGGCGCTGCAACGCTCTTGCAAGGGCCG 29251
|| | ||| || |||||||| | || || || || || || | |||||
Sbjct 4001 TGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCCTGTAGCGGCCG 3942
Query 29252 TTCAGATTTCAAAGTCGCTATTCACGATCCGTGGGCCGCGATACAAAAACCGCAAAAGGG 29311
| || ||||||||| | || |||||||| ||||| || |||||||||| ||||| ||
Sbjct 3941 TGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 3882
Query 29312 CGTGTCTGCGTGGAACGAGCCCTACAAAGGAAACTTCGGTCAGCTAATGGCGGCCAAGCT 29371
||||| | |||||||||||||||||||| ||||| || || ||||| | || |
Sbjct 3881 ATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACA 3822
Query 29372 GGCCAATCCGCACCTCAAAATTCTGCCGTCCATCGGCGGCTGGACATTGTCCGACCC--- 29428
||| || | | || ||||| || || || || || ||||| | |||| ||
Sbjct 3821 AGCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGATCCTTT 3762
Query 29429 GTTCTATTTCATGCACGACGCGGAAAAACGGCGTGTGTTTGTGGACTCGGTCAGAGAATT 29488
|||| ||| | || | | | | | || |||||| | || || | || ||
Sbjct 3761 CTTCTTTTTAGTTGACAAATCTAAGAGAACACG---ATTTGTGCAGTCAGTAAAGGAGTT 3705
Query 29489 TCTGCAGGTGTGGAAGTTTTTTGACGGCGTGGACATAGACTGGGAGTTTCCGGGTGGCAA 29548
||| | ||||| || || || || || || || || |||||||| || ||||||||
Sbjct 3704 TCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAA 3645
Query 29549 AGGCGCCAACCC 29560
||| || |||||
Sbjct 3644 AGGTGCTAACCC 3633
>seq27511
Length=800
Score = 107 bits (118), Expect = 2e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| || || | || |||||||| || || | ||| ||| |||
Sbjct 216 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACTATCACTTTGGAAGTGGAAGCTTC 275
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | | || || ||||||| || ||||||||| | || || ||
Sbjct 276 TGATACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAAGAAGGCATTCCTCCTGACCA 335
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||||| ||||||| ||| || ||||||||||| || | ||| || | || || ||
Sbjct 336 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACATTGTCAGATTATAA 395
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
||||| ||||| ||||| |||||| ||||| ||
Sbjct 396 TATTCAGAAGGAATCTACTTTGCACTTGGTGCTG 429
Score = 100 bits (110), Expect = 2e-16
Identities = 174/252 (69%), Gaps = 12/252 (5%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| || || | || ||||| || || || | ||| ||| |||
Sbjct 444 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTC 503
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | | || || || ||| |||||||| || | ||| |||||
Sbjct 504 TGATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGTATTCCCCCAGATCA 563
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730
||| |||||||||| ||| || || ||||| || |||||| ||| | | ||||
Sbjct 564 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGC----ACACTATCTGACT 619
Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATA 107790
|||| ||||| ||||| || || |||||| |||| || | || |||| || |||
Sbjct 620 ACAATATTCAGAAGGAATCAACTTTGCACCTGGTACTGCGGCTGAGAGGTGG----AATG 675
Query 107791 AAAATATTTGTA 107802
|||||||||||
Sbjct 676 CAAATATTTGTA 687
>seq133356
Length=434
Score = 104 bits (114), Expect = 2e-17
Identities = 102/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 103568 AACGGGTTCTTCTACTTGGGCCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAG 103627
|| || |||| || ||||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct 224 AATGGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 165
Query 103628 ATTATGCGCTGGGAGGAGGGCGACGACCCGGCTCGCGATCATCAGAGGTGGGCGCCGCAG 103687
|||||| |||| | ||||||||| || || || || ||| | |||||||| |||
Sbjct 164 ATTATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCTCAG 105
Query 103688 TGTCCGTTCCTG 103699
|| || ||||||
Sbjct 104 TGCCCTTTCCTG 93
>seq76306
Length=316
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| || || ||||||||||| || |||||||| || | ||| ||| |||
Sbjct 57 ATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCT 116
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | ||||| ||||||| || || |||||| | || |||||
Sbjct 117 GATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 176
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| ||||| |||| || || || || ||||| || | ||| || | ||||| ||
Sbjct 177 CAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 236
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
|| || ||||| ||||| |||||| | || |||
Sbjct 237 ATCCAGAAGGAATCTACTTTGCACTTAGTTTTG 269
>seq41046
Length=7774
Score = 87.8 bits (96), Expect = 1e-12
Identities = 143/205 (70%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||||||||| ||||| || | || || |||||||||||| |||| ||||||
Sbjct 7383 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTC 7324
Query 107615 CGATACTGTCGGCCAGGT-AAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673
|||||| | | | || |||| || || ||||| ||||| | || || |
Sbjct 7323 TGATACTATAGAAAATGTTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACC 7264
Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733
|||| | | || | ||| |||||||| || || || | ||| || | |||||||
Sbjct 7263 AGCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACA 7204
Query 107734 ACATTCAAAAGGAGTCTACGTTGCA 107758
||||||||||||| || || |||||
Sbjct 7203 ACATTCAAAAGGAATCCACATTGCA 7179
>seq28654
Length=3315
Score = 87.8 bits (96), Expect = 1e-12
Identities = 167/246 (68%), Gaps = 4/246 (2%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| |||||||| ||||| |||| || || ||||||||| | ||| ||| |
Sbjct 1930 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 1871
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|||||| | | | |||||| || || || ||||| ||| | || ||||||
Sbjct 1870 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 1811
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | ||||| | ||| ||||| || |||| || | || | | |||||||||
Sbjct 1810 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTCTCTGACTACAAC 1751
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAAT 107795
|| |||||||||||||| | || | || || | ||||||| || || ||||
Sbjct 1750 ATCCAAAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGG----TATGCAAAT 1695
Query 107796 ATTTGT 107801
||||||
Sbjct 1694 ATTTGT 1689
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||| || ||||| || ||| | ||||| |||||||| || | || ||| |
Sbjct 2387 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTC 2328
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| ||| ||| | || || |||||| || ||||| || | ||| |||||
Sbjct 2327 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 2268
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||||| ||||||| ||| || ||||| ||||| || | | ||| | | || || ||
Sbjct 2267 ACAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAA 2208
Query 107735 CATTCAAAAGGAGTCTAC 107752
||||||||||| |||||
Sbjct 2207 TATTCAAAAGGAATCTAC 2190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397529813364187
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |