Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_023552.1
Length=47162
Score E
Sequences producing significant alignments: (Bits) Value
seq249899 118 3e-22
seq184310 87.8 5e-13
>seq249899
Length=916
Score = 118 bits (130), Expect = 3e-22
Identities = 106/133 (80%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 3017 CGAGTACCACGATCACCAGATGGCGCTTGTCGCGCTGGCGCACTTCTTGAACCTCGACGG 3076
|||| |||||| | ||| ||| ||| || | |||| || | | |||||||||||
Sbjct 156 CGAGGGCCACGACAAGGCGATTGCGATTGCCGGGTTGGCCAACCACCTCAACCTCGACGG 97
Query 3077 CAAGGGCGGCAGCTACGCGCTGGCCAGCGTGCAGGCTGACACGTTCGTGCAGTCGGTGCA 3136
|||||||||||| ||||| ||||||||||||||| | || |||||||||||||| | |||
Sbjct 96 CAAGGGCGGCAGTTACGCCCTGGCCAGCGTGCAGTCCGATACGTTCGTGCAGTCCGAGCA 37
Query 3137 GACCGTCGCCGAC 3149
||||| ||||||
Sbjct 36 GACCGAGGCCGAC 24
>seq184310
Length=1059
Score = 87.8 bits (96), Expect = 5e-13
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 3151 AGATCCGCGACGTCGCGCAGGCGCACGTCGTCGAGGACATTGTGGACGTCAACTGGGGCG 3210
||||| ||||| |||| | |||| | ||||||||| | || ||| ||||||||
Sbjct 917 AGATCTGCGACATCGCCAACCAGCACATAGTCGAGGACCTCGTTGACTGGAACTGGGGAC 976
Query 3211 AGGACGAGCCCGCGCCGTTGCTGGTGTTCGACGAGATCGGTTCGCGCCAGGACGCG 3266
||||||| || ||| ||||||||||||||||||||||||||| || | ||||
Sbjct 977 CCGACGAGCAGGCACCGCTGCTGGTGTTCGACGAGATCGGTTCGCAGCACGCCGCG 1032
Score = 82.4 bits (90), Expect = 2e-11
Identities = 143/201 (71%), Gaps = 13/201 (6%)
Strand=Plus/Plus
Query 2259 CGCGAGGAGGCGCGCATCGCGTCGGTGCTGCGGGCGATCGGGCTGCCGATTCGCCGGACC 2318
|||||||| || | || | ||||| ||| ||| | ||||||||| || || |||
Sbjct 61 CGCGAGGACGCCCAGGTCACCTCGGTCCTGACCGCGGTGCAGCTGCCGATCCGGCGCACC 120
Query 2319 GACTGGCGGATC-CGCCCGAACGGCGCGCAGCCCGAGGTCGTCGAGCACGTCGCCGCCTG 2377
| |||||| | ||| | |||||||| | || |||||||||| || |||||| || ||
Sbjct 121 CAGTGGCGGGTGTCGCGC-AACGGCGCTCGCCCGGAGGTCGTCGCGCTCGTCGC-GCGTG 178
Query 2378 C-CTCGGTCTGCCGGTCGAGGGCGAGGACGCCGATCA-GCCGA--CTCCGCGC------A 2427
|| ||||||| ||||||||||| ||| || | ||||| | |||||| |
Sbjct 179 ATCTGAATCTGCCGATCGAGGGCGAGTCCGCGGAGGAGGCCGACGCGCCGCGCGGCCGGA 238
Query 2428 CGCGAGGGCGGTTCTCGTGGG 2448
| || || || ||||||||||
Sbjct 239 CCCGTGGCCGATTCTCGTGGG 259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 150300624146904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |