Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_023562.1
Length=51236
Score E
Sequences producing significant alignments: (Bits) Value
seq4597 111 5e-20
>seq4597
Length=157418
Score = 111 bits (122), Expect = 5e-20
Identities = 246/361 (68%), Gaps = 21/361 (6%)
Strand=Plus/Plus
Query 35091 GAGTAGTTCGCTCCGACACCGCCGCCCTCCATGAGGCGCATGAACGTGA---ACTCGAAG 35147
|||||||| || ||||||||||||||||| | || || | ||| || ||| ||||
Sbjct 124971 GAGTAGTTGGCGCCGACACCGCCGCCCTCGAACAGACG---GGACGCGAGGAACTTGAAG 125027
Query 35148 TGATCCGAGGGCTTCTCGGTCCACCCGCTCACCCAGCAGTTGAAGAGGTGCTGGGCGTTC 35207
|| || || ||| | | ||| ||| || | |||||| ||| |||
Sbjct 125028 TGGTCACTGGTCTTTGCCGACCATCCGGAGACGAAACAGTTGC-GAGAGAACGGG----- 125081
Query 35208 TTCACG---CCGCTGGCCCACAGGTGACGGCCTGCCGGGAGCATCTTGAACTCGGTGATG 35264
|||||| ||| || |||||||||| || || ||||||||||||||||| | | |||
Sbjct 125082 TTCACGGTTCCGGTGACCCACAGGTGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAGATC 125141
Query 35265 AGCCTGATCAGCTCTTCCCGCTCGCCTGGCTGCT-GGTACTTCGCATCCACC--AGCGCG 35321
|| || || || || |||||| || || ||| | | | | ||| |
Sbjct 125142 AGGTCGAACAAATCCTCACGCTCGTTCGGGAGCCAGGT--TGAGGACGGGACGTAGCCC- 125198
Query 35322 AGGTTCCCGTCGACCACACGCTCGACCGTCTCGGGCCAGGTCTCGGACGAGCCGTCAGGC 35381
||||| |||||||||||||| ||| |||||| ||| ||||| || |||||||||
Sbjct 125199 AGGTTGCCGTCGACCACACGTGAGACGGTCTCGAACCATGTCTCCTTCGTACCGTCAGGC 125258
Query 35382 TTCACCCGTGAGTAGGTCCGGTTGTAGACGATCTCGCCGGTCGGTCCCCAGTTGACTTCC 35441
|| | || ||||||||||| ||| || || |||| |||||||||| | | ||||
Sbjct 125259 TTGATGCGACTGTAGGTCCGGTCGTATACCTCCTTGCCGATCGGTCCCCACTGGGGTTCC 125318
Query 35442 G 35442
|
Sbjct 125319 G 125319
Score = 93.3 bits (102), Expect = 1e-14
Identities = 135/189 (71%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 34526 GAACAGGTCGTCCACGACGACCGAGATGTTGGTCGTCCAGTGCTTG--CCGGTCTCCTGC 34583
|||| ||||||| || |||| |||||||| || |||||||| || || ||| | |
Sbjct 124412 GAACCGGTCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGC--C 124469
Query 34584 TTGCAGCGGACGAACTCCTCGATCTGAGGGTCCTGCCAGTGCATCATCGACATGCGAGCC 34643
|||||| || ||| || || | ||||| | |||| |||||| | ||| || ||
Sbjct 124470 TTGCAGTTGATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCG 124529
Query 34644 GACCGGCGAACACCGCCGGCCACCACACACTGCGCGATGGCGTGGTCGATCTCCATCGCT 34703
||||| || |||| || || || || | ||||||| |||||||||||| ||| ||
Sbjct 124530 GACCGACGTGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCC 124589
Query 34704 GCGATCCCG 34712
|||| |||
Sbjct 124590 TCGATGCCG 124598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163294528373508
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |