Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_023565.1 Length=51250 Score E Sequences producing significant alignments: (Bits) Value seq4597 96.9 1e-15 >seq4597 Length=157418 Score = 96.9 bits (106), Expect = 1e-15 Identities = 243/362 (67%), Gaps = 23/362 (6%) Strand=Plus/Plus Query 34980 GAGTAGTTCGCACCGACACCGCCGCCCTCCATGAGGCGCATGAACGTGA---ACTCGAAG 35036 |||||||| || ||||||||||||||||| | || || | ||| || ||| |||| Sbjct 124971 GAGTAGTTGGCGCCGACACCGCCGCCCTCGAACAGACG---GGACGCGAGGAACTTGAAG 125027 Query 35037 TGATCCGAGGGCTTCTCGGTCCACCCGCTCACCCAGCAGTTGAAGAGGTGCTGGGCGTTC 35096 || || || ||| | | ||| ||| || | |||||| ||| ||| Sbjct 125028 TGGTCACTGGTCTTTGCCGACCATCCGGAGACGAAACAGTTGC-GAGAGAACGGG----- 125081 Query 35097 TTCACG---CCGCTGGCCCACAGGTGACGGCCTGCCGGAAGCATCTTGAACTCGGTGATG 35153 |||||| ||| || |||||||||| || || ||||| ||||||||||| | | ||| Sbjct 125082 TTCACGGTTCCGGTGACCCACAGGTGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAGATC 125141 Query 35154 AGCCTGATCAGCTCTTCCCGTTCACCTGGCTGCTGGTACCTTGCATCC---ACC-AGCGC 35209 || || || || || || || || || | ||| | || ||| | Sbjct 125142 AGGTCGAACAAATCCTCACGCTCGTTCGGGAGCCAGG---TTGAGGACGGGACGTAGCCC 125198 Query 35210 GAGGTTCCCGTCGACCACACGCTCGACCGTCTCGGGCCAGGTCTCGGACGAGCCGTCAGG 35269 ||||| |||||||||||||| ||| |||||| ||| ||||| || |||||||| Sbjct 125199 -AGGTTGCCGTCGACCACACGTGAGACGGTCTCGAACCATGTCTCCTTCGTACCGTCAGG 125257 Query 35270 CTTCACCCGTGAGTAGGTCCGGTTGTAGACGATCTCGCCGGTCGGTCCCCAGTTGACTTC 35329 ||| | || ||||||||||| ||| || || |||| |||||||||| | | ||| Sbjct 125258 CTTGATGCGACTGTAGGTCCGGTCGTATACCTCCTTGCCGATCGGTCCCCACTGGGGTTC 125317 Query 35330 CG 35331 || Sbjct 125318 CG 125319 Score = 93.3 bits (102), Expect = 1e-14 Identities = 135/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 34415 GAACAGGTCGTCCACGACGACCGAGATGTTGGTCGTCCAGTGCTTG--CCGGTCTCCTGC 34472 |||| ||||||| || |||| |||||||| || |||||||| || || ||| | | Sbjct 124412 GAACCGGTCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGC--C 124469 Query 34473 TTGCAGCGGACGAACTCCTCGATCTGAGGGTCCTGCCAGTGCATCATCGACATGCGAGCC 34532 |||||| || ||| || || | ||||| | |||| |||||| | ||| || || Sbjct 124470 TTGCAGTTGATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCG 124529 Query 34533 GACCGGCGAACACCGCCGGCCACCACACACTGCGCGATGGCGTGGTCGATCTCCATCGCT 34592 ||||| || |||| || || || || | ||||||| |||||||||||| ||| || Sbjct 124530 GACCGACGTGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCC 124589 Query 34593 GCGATCCCG 34601 |||| ||| Sbjct 124590 TCGATGCCG 124598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163339180965352