Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_023572.1 Length=42240 Score E Sequences producing significant alignments: (Bits) Value seq153278 127 6e-25 seq189415 80.6 7e-11 >seq153278 Length=837 Score = 127 bits (140), Expect = 6e-25 Identities = 288/429 (67%), Gaps = 7/429 (2%) Strand=Plus/Plus Query 26814 ACGGGTCGAGCGAGGTGATCGCATCGTGCATCCGCCCCTCGGGCACCTTGGTGTAGATCT 26873 |||||||||| | | |||||| ||| || | || || ||||||||||| | | Sbjct 91 ACGGGTCGAGGGTGTCGATCGCGCTGTGGCGGCGGCGGTCCGGAACCTTGGTGTACAGCG 150 Query 26874 GCGTCGTCGCAATGGACTTATGACGTAGCAGCTCTTGGACGACGCGAATGTCCGTGCCGT 26933 || | | || ||| || || | |||||| || || || | |||| || | Sbjct 151 CGGTTGACTGGATTGACGCGTGGCGCATCAGCTCCTGCACTGTCCGCAGATCCGCACCTT 210 Query 26934 TGTCGAGCAGTGTGGTCGCGTACCAGTGACGCAGGCAGTGCGGCGTGCCGCGCACCCCGG 26993 |||||||||||| || |||||||||| ||||| |||| || |||||| | || || Sbjct 211 CGTCGAGCAGTGTCGTTCCGTACCAGTGCCGCAGCGAGTGTGGGGTGCCGGGGACATCGA 270 Query 26994 CTCGCTTCATCGTGCGGCCGATGATGTCGGACACCGATTTCGACAGGATGTGCTCGCC-- 27051 | ||| ||||| ||| |||||||||||| || ||||||||| ||| ||||| || Sbjct 271 CGCGCCGCATCGCGCGCCCGATGATGTCGCTGACGGATTTCGACCGGACGTGCTGACCGG 330 Query 27052 --CTCGTGGCCCCGCATCGGGAACCAGTACCCGGCGGCGGGCATCTCCGAGGCCATCTCG 27109 | ||| | || | |||||||| | ||| || ||||||| | |||| ||| Sbjct 331 GGCACGTCGAGTTGC-TGGGGAACCACCATCCGCGGGTGGGCATCGTCTCGGCCGCGTCG 389 Query 27110 ATCAGCAGTGGATGCAGCGGCACCGAGCGCAGCCGTTTGCCCTTGCCCTTGACCCACAGC 27169 | || ||||| |||||||| | || ||| | ||| |||||| | || | |||| Sbjct 390 ACGAGAAGTGGGTGCAGCGGGAGTGACCGCGTCTTGTTGTGCTTGCCGGTCACTCGCAGC 449 Query 27170 ACGCGGGCCGACATG-TCGATGTCCTCGCCACGGATCTTGGCGATCTCATGGACGCGCAG 27228 ||| | | | |||||||||||||| || | || || | || || || || Sbjct 450 -GACGGTTTGGCGGGATCGATGTCCTCGCCGCGCACCTGGGACACGTCTCCCACACGGAG 508 Query 27229 ACCGGCGAG 27237 ||||||||| Sbjct 509 ACCGGCGAG 517 >seq189415 Length=2896 Score = 80.6 bits (88), Expect = 7e-11 Identities = 110/152 (72%), Gaps = 10/152 (7%) Strand=Plus/Minus Query 30745 TGCACGCAGACCGACCCCGAGGTGTTCTTTCCCGAGAAAGGCGAACCCGTTGGCCCCGCG 30804 ||| |||||||||||||||||| |||||| |||||||| |||| | | | |||||| Sbjct 551 TGCGCGCAGACCGACCCCGAGGCGTTCTTCCCCGAGAAGGGCG-----GCTCGACCCGCG 497 Query 30805 CG--CAA---TATCTGCAGGCGGTGCGAAGTGCAGGCGAAGTGCCTGGAGGTTGCACTCG 30859 | ||| |||||| | | ||||| ||| ||||| ||||||| ||| || || Sbjct 496 AGGCCAAGCGCATCTGCCAGGGCTGCGAGGTGAAGGCGGAGTGCCTCGAGTACGCGCTGC 437 Query 30860 CCCGCGAAGAAGAGTTCGGCATCTGGGGCGGT 30891 | || || |||||| |||||||||||| Sbjct 436 ACAAGGACGAGCGGTTCGGTATCTGGGGCGGT 405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134602048642892