Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_023577.1 Length=51797 Score E Sequences producing significant alignments: (Bits) Value seq4597 111 5e-20 >seq4597 Length=157418 Score = 111 bits (122), Expect = 5e-20 Identities = 246/361 (68%), Gaps = 21/361 (6%) Strand=Plus/Plus Query 35510 GAGTAGTTCGCACCGACACCGCCGCCCTCCATGAGGCGCATGAACGTGA---ACTCGAAG 35566 |||||||| || ||||||||||||||||| | || || | ||| || ||| |||| Sbjct 124971 GAGTAGTTGGCGCCGACACCGCCGCCCTCGAACAGACG---GGACGCGAGGAACTTGAAG 125027 Query 35567 TGATCCGAGGGCTTCTCGGTCCACCCGCTCACCCAGCAGTTGAAGAGGTGCTGGGCGTTC 35626 || || || ||| | | ||| ||| || | |||||| ||| ||| Sbjct 125028 TGGTCACTGGTCTTTGCCGACCATCCGGAGACGAAACAGTTGC-GAGAGAACGGG----- 125081 Query 35627 TTCACG---CCGCTGGCCCACAGGTGACGACCTGCCGGGAGCATCTTGAACTCGGTGATG 35683 |||||| ||| || |||||||||| || || ||||||||||||||||| | | ||| Sbjct 125082 TTCACGGTTCCGGTGACCCACAGGTGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAGATC 125141 Query 35684 AGCCTGATCAGCTCTTCCCGCTCGCCTGGCTGCT-GGTACTTCGCATCCACC--AGCGCG 35740 || || || || || |||||| || || ||| | | | | ||| | Sbjct 125142 AGGTCGAACAAATCCTCACGCTCGTTCGGGAGCCAGGT--TGAGGACGGGACGTAGCCC- 125198 Query 35741 AGGTTCCCGTCGACCACACGCTCGACCGTCTCGGGCCAGGTCTCGGACGAGCCGTCAGGC 35800 ||||| |||||||||||||| ||| |||||| ||| ||||| || ||||||||| Sbjct 125199 AGGTTGCCGTCGACCACACGTGAGACGGTCTCGAACCATGTCTCCTTCGTACCGTCAGGC 125258 Query 35801 TTCACCCGTGAGTAGGTCCGGTTGTAGACGATCTCGCCGGTCGGTCCCCAGTTGACTTCC 35860 || | || ||||||||||| ||| || || |||| |||||||||| | | |||| Sbjct 125259 TTGATGCGACTGTAGGTCCGGTCGTATACCTCCTTGCCGATCGGTCCCCACTGGGGTTCC 125318 Query 35861 G 35861 | Sbjct 125319 G 125319 Score = 93.3 bits (102), Expect = 1e-14 Identities = 135/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 34945 GAACAGGTCGTCCACGACGACCGAGATGTTGGTCGTCCAGTGCTTG--CCGGTCTCCTGC 35002 |||| ||||||| || |||| |||||||| || |||||||| || || ||| | | Sbjct 124412 GAACCGGTCGTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGC--C 124469 Query 35003 TTGCAGCGGACGAACTCCTCGATCTGAGGGTCCTGCCAGTGCATCATCGACATGCGAGCC 35062 |||||| || ||| || || | ||||| | |||| |||||| | ||| || || Sbjct 124470 TTGCAGTTGATGAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCG 124529 Query 35063 GACCGGCGAACACCGCCGGCCACCACACACTGCGCGATGGCGTGGTCGATCTCCATCGCT 35122 ||||| || |||| || || || || | ||||||| |||||||||||| ||| || Sbjct 124530 GACCGACGTGCACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCC 124589 Query 35123 GCGATCCCG 35131 |||| ||| Sbjct 124590 TCGATGCCG 124598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 165083821518114