Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_023591.1 Length=95705 Score E Sequences producing significant alignments: (Bits) Value seq110814 125 4e-24 >seq110814 Length=1651 Score = 125 bits (138), Expect = 4e-24 Identities = 254/375 (68%), Gaps = 8/375 (2%) Strand=Plus/Plus Query 31010 ACCTGGTGTTCGCCGGGCCGCCCGGAACCGGCAAGACCACGATCGCCCGGGTGGTGGCCA 31069 |||| | |||| |||| || ||||| ||||||||||| || ||||||||| | | |||| Sbjct 279 ACCTCGCGTTCACCGGTCCTCCCGGCACCGGCAAGACGACCATCGCCCGGATCATCGCCA 338 Query 31070 AAATCTATTGCGGGTTAGGCATTCTCAAACGCGACTATGTGCGCGAGGTGCACCGCGCCG 31129 | | ||| |||||| | || | ||| ||||| | ||||| |||| || Sbjct 339 AGACCTACTGCGGGCTCGGGCTGCTCGCGACCGACTCCATCGTCGAGGCCGGCCGCCGCG 398 Query 31130 ACTTGATCGGCCAACATATCGGCGAAACGGAGGCCAAAACCAACGCCGTGATAGACGACT 31189 || | ||||| |||| ||||| || | |||| || || || || || | Sbjct 399 ACCTCGTCGGCGAACACCTCGGCAGCACCGCACCCAAGACGTCGGCGGTCATCGATCGCG 458 Query 31190 GCCTCGATGGCGTGCTTTTCCTCGATGAGGCATACACGTTGGTCTCCACCGG------CG 31243 || || || ||||| ||| |||| ||||| |||||| | || ||||| || Sbjct 459 CGCTGGACGGGGTGCTGTTCATCGACGAGGCCTACACGCTCATCCAGACCGGGCTGTCCG 518 Query 31244 CCAAGAACGATTTCGGGC-CGATCGCCCTGGACACGCTGCTGGCGCGAATGGAAAACGAC 31302 | ||| ||||| | ||| ||| | ||||| |||||||| || ||||| || || Sbjct 519 GCGGTGACGCGTTCGGCCGCGAG-GCCGTCGACACCCTGCTGGCCCGCATGGAGGACAAC 577 Query 31303 AGGGACCGCCTGGTGGTCATCATCGCCGGATACACCCCCGAGCTCGAAAGATTCCTGGAA 31362 ||||||| || ||||||||||||||||| ||| | |||| |||| || | ||| Sbjct 578 CGGGACCGACTCGTGGTCATCATCGCCGGGTACGACGGCGAGATCGACCGACTGCTGTCG 637 Query 31363 GCCAACGACGGTTTC 31377 | ||||||||| || Sbjct 638 TCGAACGACGGTCTC 652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 305097410531158