Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_023609.1 Length=46739 Score E Sequences producing significant alignments: (Bits) Value seq4597 125 2e-24 seq139035 91.5 4e-14 >seq4597 Length=157418 Score = 125 bits (138), Expect = 2e-24 Identities = 583/903 (65%), Gaps = 63/903 (7%) Strand=Plus/Plus Query 34408 GTCGACCTCGACCGAGATGTTGGTCGTCCAGTGCTTCCCGGAGTCGTTCTTGCAGTTGAC 34467 ||| |||||||| |||||||| || |||||||| | ||||| ||||||||||| Sbjct 124421 GTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGCCTTGCAGTTGAT 124480 Query 34468 GAACTCGGTGATCTGCGGGTCAGCCCAGTGCATCATGGCCATGCGTGCCGACCGGCGAAC 34527 ||| ||| || | |||||| ||||| |||||| ||||| || || ||||| || | Sbjct 124481 GAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACGTGC 124540 Query 34528 GCCGCCGGCTACCACGCACTGTGCGATGGCGTGGTCGATCTCCATCGCGGCCATGCCGTC 34587 || || || || ||| | |||||| |||||||||||| ||| || | |||||| Sbjct 124541 ACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCCGGT 124600 Query 34588 GAGCGAGCCGCCCTCCGTGGCCTTCTCCGAGAGGATCT----CGCACAC-GTCGATGAGC 34642 || | | || | | || ||||| | ||| | ||| || || |||||| Sbjct 124601 CAG-GTGACGGC--CGGTTGCCTTGT-TGAGGGTGTCTGTGATGCTGACAATCGATG--- 124653 Query 34643 ATCCGAGCCAGCGGCAGAGGGCCCGAGGCCCGACCGCCGAAGGTCTTCAGCTTGGCACCG 34702 || |||| || ||||| || || || ||||| ||||||| | | ||| Sbjct 124654 -TC---GCCAAAGGTGCTGGGCCAGAAGCGGTTCCACCGAATGTCTTCAACGGTACGCCG 124709 Query 34703 AACGGACGGACCCGAGACACGTCGTAGACGCGCTGGAAGTGCCCGACCTCATCGCGGTAG 34762 | ||| |||| |||| ||||| | |||| | |||| | |||| | Sbjct 124710 TGTCCTCTGACATCGGACAGGTCGAAGACG---AGTCCGTGCATGCCCTCTT--CGGTCG 124764 Query 34763 TGGGTCTCGATCAGGTCCACCAGGGCAGCCGCCCAGCCTTCACGGGAGTCCTCGATG--A 34820 || || |||||||||| | || || ||||||| | |||| |||||| | | | Sbjct 124765 -ACGTGTCAATCAGGTCCAGCCATGCTGCGACCCAGCCCTGGCGGGTGTCCTCCACGACA 124823 Query 34821 TGAACGCGCCAGCCCACTCGGGGTCGTACTCCGTGGAGAGCACGCCGGCCTCCTTCATCG 34880 ||| ||| ||| | || || | | ||| || | || ||| |||| || | | | Sbjct 124824 TGAGTGCGGCAG--CTTTCCGGCGCCTTGTCCATGAACAGGCTGCCTGCCTGCTCCTTGG 124881 Query 34881 T--CT-CGTAGTCCGGGTG---CTCCG-GAT-----CGCAGACGATGTGGACGTACAGCT 34928 | || ||||||||||||| ||| | ||| ||| |||| || | ||| Sbjct 124882 TTGCTGCGTAGTCCGGGTGAGACTCGGCGATGGTGACGCCCACGAACAGGCTGCCCAGGA 124941 Query 34929 CCTGCTGTACGGGCCCGTAGTTGAGGAACCGGTTCGAGTAGTTGGCACCGACACCGCCGC 34988 | |||| | |||| |||| | | | ||||||||||| ||||||||||||| Sbjct 124942 TCGGCTG-AGTGGCC-----TTGATCAGGTGCTGTGAGTAGTTGGCGCCGACACCGCCGC 124995 Query 34989 CCTCCATGAGGCGCATGAACG---TGAACTCGAAGTGGTCCGAGGGCTTCTCGGTCCACC 35045 |||| | || || | ||| ||||| ||||||||| || ||| | | ||| | Sbjct 124996 CCTCGAACAGACG---GGACGCGAGGAACTTGAAGTGGTCACTGGTCTTTGCCGACCATC 125052 Query 35046 CCGACACCCAGCAGTTG-AAGAGGTGCTGTGCGTTCGTCACG---CCCGACGCCCACAGG 35101 | || || | |||||| |||| || ||||| || | |||||||| Sbjct 125053 CGGAGACGAAACAGTTGCGAGAGAACGGGT-------TCACGGTTCCGGTGACCCACAGG 125105 Query 35102 TGGCGGCCAGCGGGGATCGCCTTGAACTCGGTGATGAGTCGGATCAGATCCTCCCGCTCA 35161 ||||| || || |||| | |||||| | | ||| || || || |||||| ||||| Sbjct 125106 TGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAGATCAGGTCGAACAAATCCTCACGCTCG 125165 Query 35162 CCGGGGAG-CTGGTATCGCTCATCCACCAGCGCGAGGTTGCCGTCCACCACGCGCTTGAC 35220 ||||| | ||| | | ||| | ||||||||||| ||||| || ||| Sbjct 125166 TTCGGGAGCCAGGTTGAGGACGGGACGTAGC-CCAGGTTGCCGTCGACCACACGTGAGAC 125224 Query 35221 CGTCTCTGGCCACGTCTCCTGGGTGCCGTCAGGCTTGACCCGCGAGTACGTCCGGTTGTA 35280 ||||| ||| ||||||| || ||||||||||||| || ||| ||||||| ||| Sbjct 125225 GGTCTCGAACCATGTCTCCTTCGTACCGTCAGGCTTGATGCGACTGTAGGTCCGGTCGTA 125284 Query 35281 GAC 35283 || Sbjct 125285 TAC 125287 >seq139035 Length=1904 Score = 91.5 bits (100), Expect = 4e-14 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 32310 ATGTAGAAGGTGGCCGTCGCGTGCTCCAGCACGGACTCGTGGCCGACCTTCAGGATGTGG 32369 |||||||||||| ||| |||||||||||||| || |||||| |||| |||||||| Sbjct 1528 ATGTAGAAGGTGACCGACGCGTGCTCCAGCAGCGAGAGGTGGCCCACCTCGAGGATGTGC 1587 Query 32370 GCCAGGTAGTCCTCGTTCTCGGCCGTCTTCGGGTTCGGCCGGTGGAAGCTGCGGTAGCAG 32429 ||||||| | ||||| ||||||| ||||| ||| | |||| ||||||| Sbjct 1588 CGCAGGTAGGCGGCGTTCGTGGCCGTCCGGGGGTTGGGCTTCTCCCAGCTCTGGTAGCAC 1647 Query 32430 TTCCGGCCCGCGAACTCCGCGAG 32452 || || ||||||||| |||| Sbjct 1648 GCACGTCCGGCGAACTCCACGAG 1670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148951477979046