Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_023609.1
Length=46739
Score E
Sequences producing significant alignments: (Bits) Value
seq4597 125 2e-24
seq139035 91.5 4e-14
>seq4597
Length=157418
Score = 125 bits (138), Expect = 2e-24
Identities = 583/903 (65%), Gaps = 63/903 (7%)
Strand=Plus/Plus
Query 34408 GTCGACCTCGACCGAGATGTTGGTCGTCCAGTGCTTCCCGGAGTCGTTCTTGCAGTTGAC 34467
||| |||||||| |||||||| || |||||||| | ||||| |||||||||||
Sbjct 124421 GTCTACCTCGACGGAGATGTTCGTGGTCCAGTGAGTGGACCAGTCGGCCTTGCAGTTGAT 124480
Query 34468 GAACTCGGTGATCTGCGGGTCAGCCCAGTGCATCATGGCCATGCGTGCCGACCGGCGAAC 34527
||| ||| || | |||||| ||||| |||||| ||||| || || ||||| || |
Sbjct 124481 GAAGTCGAAGACTTCCGGGTCGTCCCAGACCATCATTGCCATACGCGCGGACCGACGTGC 124540
Query 34528 GCCGCCGGCTACCACGCACTGTGCGATGGCGTGGTCGATCTCCATCGCGGCCATGCCGTC 34587
|| || || || ||| | |||||| |||||||||||| ||| || | ||||||
Sbjct 124541 ACCACCTGCGACGACGGATGCCGCGATGTCGTGGTCGATCTGCATGGCCTCGATGCCGGT 124600
Query 34588 GAGCGAGCCGCCCTCCGTGGCCTTCTCCGAGAGGATCT----CGCACAC-GTCGATGAGC 34642
|| | | || | | || ||||| | ||| | ||| || || ||||||
Sbjct 124601 CAG-GTGACGGC--CGGTTGCCTTGT-TGAGGGTGTCTGTGATGCTGACAATCGATG--- 124653
Query 34643 ATCCGAGCCAGCGGCAGAGGGCCCGAGGCCCGACCGCCGAAGGTCTTCAGCTTGGCACCG 34702
|| |||| || ||||| || || || ||||| ||||||| | | |||
Sbjct 124654 -TC---GCCAAAGGTGCTGGGCCAGAAGCGGTTCCACCGAATGTCTTCAACGGTACGCCG 124709
Query 34703 AACGGACGGACCCGAGACACGTCGTAGACGCGCTGGAAGTGCCCGACCTCATCGCGGTAG 34762
| ||| |||| |||| ||||| | |||| | |||| | |||| |
Sbjct 124710 TGTCCTCTGACATCGGACAGGTCGAAGACG---AGTCCGTGCATGCCCTCTT--CGGTCG 124764
Query 34763 TGGGTCTCGATCAGGTCCACCAGGGCAGCCGCCCAGCCTTCACGGGAGTCCTCGATG--A 34820
|| || |||||||||| | || || ||||||| | |||| |||||| | | |
Sbjct 124765 -ACGTGTCAATCAGGTCCAGCCATGCTGCGACCCAGCCCTGGCGGGTGTCCTCCACGACA 124823
Query 34821 TGAACGCGCCAGCCCACTCGGGGTCGTACTCCGTGGAGAGCACGCCGGCCTCCTTCATCG 34880
||| ||| ||| | || || | | ||| || | || ||| |||| || | | |
Sbjct 124824 TGAGTGCGGCAG--CTTTCCGGCGCCTTGTCCATGAACAGGCTGCCTGCCTGCTCCTTGG 124881
Query 34881 T--CT-CGTAGTCCGGGTG---CTCCG-GAT-----CGCAGACGATGTGGACGTACAGCT 34928
| || ||||||||||||| ||| | ||| ||| |||| || | |||
Sbjct 124882 TTGCTGCGTAGTCCGGGTGAGACTCGGCGATGGTGACGCCCACGAACAGGCTGCCCAGGA 124941
Query 34929 CCTGCTGTACGGGCCCGTAGTTGAGGAACCGGTTCGAGTAGTTGGCACCGACACCGCCGC 34988
| |||| | |||| |||| | | | ||||||||||| |||||||||||||
Sbjct 124942 TCGGCTG-AGTGGCC-----TTGATCAGGTGCTGTGAGTAGTTGGCGCCGACACCGCCGC 124995
Query 34989 CCTCCATGAGGCGCATGAACG---TGAACTCGAAGTGGTCCGAGGGCTTCTCGGTCCACC 35045
|||| | || || | ||| ||||| ||||||||| || ||| | | ||| |
Sbjct 124996 CCTCGAACAGACG---GGACGCGAGGAACTTGAAGTGGTCACTGGTCTTTGCCGACCATC 125052
Query 35046 CCGACACCCAGCAGTTG-AAGAGGTGCTGTGCGTTCGTCACG---CCCGACGCCCACAGG 35101
| || || | |||||| |||| || ||||| || | ||||||||
Sbjct 125053 CGGAGACGAAACAGTTGCGAGAGAACGGGT-------TCACGGTTCCGGTGACCCACAGG 125105
Query 35102 TGGCGGCCAGCGGGGATCGCCTTGAACTCGGTGATGAGTCGGATCAGATCCTCCCGCTCA 35161
||||| || || |||| | |||||| | | ||| || || || |||||| |||||
Sbjct 125106 TGGCGTCCGGCCGGGAGCATCTTGAAGTTGTAGATCAGGTCGAACAAATCCTCACGCTCG 125165
Query 35162 CCGGGGAG-CTGGTATCGCTCATCCACCAGCGCGAGGTTGCCGTCCACCACGCGCTTGAC 35220
||||| | ||| | | ||| | ||||||||||| ||||| || |||
Sbjct 125166 TTCGGGAGCCAGGTTGAGGACGGGACGTAGC-CCAGGTTGCCGTCGACCACACGTGAGAC 125224
Query 35221 CGTCTCTGGCCACGTCTCCTGGGTGCCGTCAGGCTTGACCCGCGAGTACGTCCGGTTGTA 35280
||||| ||| ||||||| || ||||||||||||| || ||| ||||||| |||
Sbjct 125225 GGTCTCGAACCATGTCTCCTTCGTACCGTCAGGCTTGATGCGACTGTAGGTCCGGTCGTA 125284
Query 35281 GAC 35283
||
Sbjct 125285 TAC 125287
>seq139035
Length=1904
Score = 91.5 bits (100), Expect = 4e-14
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 32310 ATGTAGAAGGTGGCCGTCGCGTGCTCCAGCACGGACTCGTGGCCGACCTTCAGGATGTGG 32369
|||||||||||| ||| |||||||||||||| || |||||| |||| ||||||||
Sbjct 1528 ATGTAGAAGGTGACCGACGCGTGCTCCAGCAGCGAGAGGTGGCCCACCTCGAGGATGTGC 1587
Query 32370 GCCAGGTAGTCCTCGTTCTCGGCCGTCTTCGGGTTCGGCCGGTGGAAGCTGCGGTAGCAG 32429
||||||| | ||||| ||||||| ||||| ||| | |||| |||||||
Sbjct 1588 CGCAGGTAGGCGGCGTTCGTGGCCGTCCGGGGGTTGGGCTTCTCCCAGCTCTGGTAGCAC 1647
Query 32430 TTCCGGCCCGCGAACTCCGCGAG 32452
|| || ||||||||| ||||
Sbjct 1648 GCACGTCCGGCGAACTCCACGAG 1670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148951477979046
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |