Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_023690.1
Length=110569
Score E
Sequences producing significant alignments: (Bits) Value
seq68307 212 4e-50
seq24208 185 6e-42
seq101977 152 4e-32
seq216206 104 2e-17
seq50100 89.7 4e-13
seq145472 82.4 5e-11
>seq68307
Length=2902
Score = 212 bits (234), Expect = 4e-50
Identities = 262/358 (73%), Gaps = 3/358 (1%)
Strand=Plus/Plus
Query 96951 GACCGCCGCCTCAATCTCTCCGTCGGATACGAAAGCGCCCTGTATCCGGATGGCACCCCG 97010
|||| | ||| ||||| |||||| | ||| |||||||| |||||||||| |
Sbjct 1678 GACCACGGCCGAGATCTCCTCGTCGGTGATGAACGCGCCCTGCATCCGGATGGGGCGGTT 1737
Query 97011 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 97070
||| |||| || | ||| | ||||| ||||| || ||||||| ||| || || ||
Sbjct 1738 CGCGCCCATCGGGATGAAGAGTCCGTCGCCCATGCCGATGAGCTTCTCCGCGCCCGGCTG 1797
Query 97071 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 97130
|| ||||| || || ||||| || || | || ||||||| ||||| ||||| ||
Sbjct 1798 ATCGAGGATGACGCGCGAGTCGGTCAGCGACGACGTCGCGAACGCGAGCCGCGACGGGAC 1857
Query 97131 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 97190
||||| ||||| ||||| ||||| || || || || || ||||| ||||| || || ||
Sbjct 1858 GTTGGTCTTGATCAGGCCGGTGACGACGTCGACCGACGGTCGCTGGGTCGCGAGCACCAG 1917
Query 97191 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 97250
|| ||||| || ||||| |||||||||| ||||||||| || | ||||||| ||
Sbjct 1918 GTGGATACCCGCCGCGCGGGCCTTCTGGGTGATGCGGACGATCGCGTCCTCGACGTC--- 1974
Query 97251 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 97308
|||| || |||||||||||| ||||| |||||||| | ||| ||||||||||
Sbjct 1975 CTTGGGCGCGGTCATCATGAGGTCGGCGAGCTCGTCGACGATGGCCAGGATGTAGGGG 2032
Score = 123 bits (136), Expect = 2e-23
Identities = 133/176 (76%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 97435 AGGTGGGGGATACCGTTGTACGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGT 97494
|| || ||||| || | |||||| || ||||| ||||||||||||||||| | ||| |
Sbjct 2219 AGATGCGGGATGCCCTCGTACGGCGTCAGTTCGACCATCTTCGGGTCGATGAGGATCATC 2278
Query 97495 TTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTG 97554
||| || || | || ||| |||| || |||| ||||||||| | |||||||
Sbjct 2279 CGGACGTCGTCCGGGGTCGCCCGGGTCAGCAGTGACACCAACATCGAGTTCACGAAGCTG 2338
Query 97555 GACTTACCTGATCCGGTGGCGCCAGCCACCAGCAGGTGCGGCATTTTGGCCAGGTT 97610
||||| || || ||||||| ||| || || |||||||| ||||| ||||| |||||
Sbjct 2339 GACTTGCCCGAACCGGTGGAGCCGGCGACGAGCAGGTGGGGCATCTTGGCGAGGTT 2394
>seq24208
Length=1566
Score = 185 bits (204), Expect = 6e-42
Identities = 221/298 (74%), Gaps = 3/298 (1%)
Strand=Plus/Plus
Query 97011 CGCCCCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTC 97070
|||||||| || ||||| | |||||| ||| || | |||| |||||| || ||
Sbjct 431 CGCCCCCATCGGGAGGAACAGCCCGTCGCCCTGGCCGACCAGCTTCTCGGCGCCCGGCTG 490
Query 97071 GTCCAGGATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCAC 97130
||| ||||| |||||||| ||| ||| | |||||||| | ||| | ||||||||
Sbjct 491 GTCGAGGATGACCCGGCTGTCGCCGAGGCTCGACGTGGCGAAGGCGAGTCGCGACGGCAC 550
Query 97131 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 97190
||||| ||||| || || || || |||||||| || |||||||||||||| || |||||
Sbjct 551 GTTGGCCTTGATCAGACCCGTCACCACATCCACCGACGGCCGCTGCGTCGCGAGCACGAG 610
Query 97191 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 97250
|| || ||||| |||||||| ||||| |||||| || || ||||||| ||
Sbjct 611 GTGGATGCCGGCGGCGCGCGCGAGCTGGGTGATGCGCACGATCGACTCCTCGACGTC--G 668
Query 97251 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGG 97308
| | | || ||||||| ||||| || || ||||||||||| |||| || |||||||
Sbjct 669 CGCGGCG-CGACCATCATCAGGTCGGCCAGCTCGTCGACCACGACCAGGAGGTAGGGG 725
Score = 93.3 bits (102), Expect = 3e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 97536 CATCGAGTTGATGAAGCTGGACTTACCTGATCCGGTGGCGCCAGCCACCAGCAGGTGCGG 97595
|||||||||||||||||| ||||| || |||||||||| ||| || || |||||||||||
Sbjct 1013 CATCGAGTTGATGAAGCTCGACTTGCCGGATCCGGTGGAGCCGGCGACGAGCAGGTGCGG 1072
Query 97596 CATTTTGGCCAGGTTC 97611
||| || || ||||||
Sbjct 1073 CATCTTCGCGAGGTTC 1088
>seq101977
Length=1174
Score = 152 bits (168), Expect = 4e-32
Identities = 189/254 (74%), Gaps = 5/254 (2%)
Strand=Plus/Plus
Query 97056 CTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCGGTGAGTGATGCTG-TGGCGAACG 97114
|||||| || || ||| ||||| || || || ||||| || || |||| ||||||| |
Sbjct 3 CTCGGCGCCCGGCTGGTCGAGGATGACGCGACTGTCGGTCAGCGA-GCTGGTGGCGAAGG 61
Query 97115 AGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCT 97174
| || | || |||||||||| ||||| || || ||||| || || ||||||||||| |
Sbjct 62 ACAGTCGGGAGGGCACGTTGGTCTTGATCAGACCGGTGACGACGTCGACGGAGGGCCGTT 121
Query 97175 GCGTCGCCAGGACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGT 97234
| || || ||||| || || || ||||| || || |||||||||| ||| ||||| ||
Sbjct 122 GGGTGGCGAGGACCAGGTGGATCCCGGCGGCCCGGGCCTTCTGGGTGATCCGGACGATCG 181
Query 97235 TGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTA 97294
| ||||||| || | | ||||| |||||| ||||| ||||| ||||||| |
Sbjct 182 CGTCCTCGACGTC--CCGCGGAGCCG-TCATCATCAGGTCGGCGAGCTCGTCGATGATCC 238
Query 97295 CCACGATGTAGGGG 97308
||| |||||| |||
Sbjct 239 CCAGGATGTACGGG 252
Score = 143 bits (158), Expect = 2e-29
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 97411 GGCTCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTACGGGGTGAGTTCCACC 97470
|||| ||||| | ||| || ||||| ||||| || | |||||| ||||| || |||
Sbjct 415 GGCTGGGTGATGATCGGGGTCAGCAGGTGCGGGATGCCCTCGTACGGCGTGAGCTCGACC 474
Query 97471 ATCTTCGGGTCGATCATGATGAGTTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAA 97530
||||| |||||||||| | | |||| | || ||| || | |||| ||
Sbjct 475 ATCTTGGGGTCGATCAGCACCATCCGGACCTCGGCCGGCGAGGCCCGCTGCAGCAGCGAG 534
Query 97531 ACCAGCATCGAGTTGATGAAGCTGGACTTACCTGATCCGGTGGCGCCAGCCACCAGCAGG 97590
|||||||||||||| | |||||||||||| || || ||||||||||| ||||||||||||
Sbjct 535 ACCAGCATCGAGTTCACGAAGCTGGACTTGCCGGAACCGGTGGCGCCGGCCACCAGCAGG 594
Query 97591 TGCGGCATTTTGGCCAGGTTCA 97612
||||| | |||||||||||||
Sbjct 595 TGCGGGGTCTTGGCCAGGTTCA 616
>seq216206
Length=797
Score = 104 bits (114), Expect = 2e-17
Identities = 362/553 (65%), Gaps = 29/553 (5%)
Strand=Plus/Plus
Query 99686 GTCGAGCTTGGGGAAATCAGGCTCGCGGATCTCATCTGGCCACCGCAGCGTCTGCAACGT 99745
||||||| ||||| || | |||||| | ||| || ||| |||||||||||| |
Sbjct 4 GTCGAGCCCCGGGAACTCGGCCTCGCGCACCTCGTCGTCCCAGAGCAGCGTCTGCAGCAG 63
Query 99746 CAGAACCTCATTCTTGCCCGTCACACGCAACACCGCCAG--GTGTTCCTTGCTCCGCAGG 99803
||| ||||| | | ||| || |||| | ||||||| | || | |||| |||||
Sbjct 64 CAGCACCTCGT-CGTGC-----ACTCGCAGCGCCGCCAGCCGGGTGCGTTGC--CGCAGC 115
Query 99804 GTTACCCGTACGATGGCGACCTTGC---CGGCGTCAGAGAGCGTCCTAGCCAGCAGAGCG 99860
| | || ||||| || | ||| ||| || ||||| | |||||| |||
Sbjct 116 GAGATGCGCACGATCGC---CGTGCGCTCGGTCTCCTCCAGCGTGCGGCGCAGCAGCGCG 172
Query 99861 TAGGGCCGCACCGAGCCCTC-TACGTT--CAGGTAGTAGGGCTTGTCGAGCATGATCGGG 99917
|| | | || ||||| | || ||||||||| |||||| |||||
Sbjct 173 TACGCCTTCATCGAGCTGGAATCCGGCGCCAGGTAGTAACTGCGGTCGAGGCGGATCGCA 232
Query 99918 TCGACCTCCCCGGCCGGCACGAACTCTACGACGTCAATCACCTTGTTGGTTTCGCTGGGC 99977
|| |||| | | | ||||||||||| |||||||| || | | || ||| |||
Sbjct 233 TCCACCTGCTCCGAGGGCACGAACTCGACGACGTCGATGTCGCGGCTGCGCTCGGCCGGC 292
Query 99978 AGCTCTGCCAAGTCCTCATTGGTCAGTAGGGCGGTTTGCCCGTCGACCTCGAACACCTTG 100037
||| |||| || || ||| | || | | | || | || || | ||| | |||||
Sbjct 293 AGCGACGCCAGATCGTCCTTGCTGAGCACGACCGTGCGGTCGCCGTCGTCGTAGGCCTTG 352
Query 100038 CCCAGATCGGC-CGTGTGG-ACCTGCTCACCGCAGCATTCACAGATCTTG---TGATACT 100092
| ||| || || || || ||| |||||| || || |||| || ||
Sbjct 353 TC--GATGTGCTCGAAGGGCACGACCTCGCCGCAGATCTCGCA---CTTGCGCTGGTAGC 407
Query 100093 TGATCCGCCCGCCGTCCTGGACGTGCGCCAGATGGCCCTTCAGGTCGTGCTCTTCGGTGG 100152
||| ||||||| ||| | | ||||| || |||| | || |||||| ||||| ||||
Sbjct 408 GGATGCGCCCGCTGTCGTCGTCGTGCACCTGATGCAGCGGCACGTCGTGGTCTTCCGTGG 467
Query 100153 CCGCGTACATCTTCACCGGCACGTTGACCAACCCGAAGTTGACCGCGCCTGTCCACACCG 100212
||| | | | ||| || ||||||||||||| ||||||| | | || ||| |||| | ||
Sbjct 468 CCGAGAAGAGCTTGACGGGCACGTTGACCAGCCCGAAGCTCAGCGAGCCCTTCCAGATCG 527
Query 100213 CTCTCATGCCTGC 100225
| ||||| |||||
Sbjct 528 CCCTCATTCCTGC 540
>seq50100
Length=1361
Score = 89.7 bits (98), Expect = 4e-13
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 50735 TCACCCCGCACGACCTCCGGCACACCTGCGCCTCGCTGGCCATCTCCTCCGGCGCCAACG 50794
|||| ||||||||||| ||||||||| |||||||| || ||||| | ||||| ||||
Sbjct 266 TCACTCCGCACGACCTGCGGCACACCGCTGCCTCGCTCGCTATCTCGGCGGGCGCGAACG 207
Query 50795 TCAAGGCGGTCCAGAACCTTCTGGGACAC 50823
||||||| ||||||| | | || ||||||
Sbjct 206 TCAAGGCCGTCCAGACCATGCTCGGACAC 178
>seq145472
Length=1506
Score = 82.4 bits (90), Expect = 5e-11
Identities = 249/375 (66%), Gaps = 21/375 (6%)
Strand=Plus/Minus
Query 99575 CAGTTCCACCTTGTAGGTGTCCTGGTACTTGTCAGGGTTGAACGGCGC-GGACAGCTCAT 99633
||| || | || ||||||||||| ||||| |||| ||| | ||| || || | |
Sbjct 1319 CAGCTCGAGCTGGTAGGTGTCCTCGTACTCCGACGGGTCGAA-GTCGCCGGCCATCGTCT 1261
Query 99634 CAACGAGCATCGCCGCCACCTTCAGCTCAGCCTCGGACAGTTC--CGGCTTGTTGTCGAG 99691
| | ||| |||||||| || || || | ||| | | || ||| | || ||||||
Sbjct 1260 CGATCAGCGACGCCGCCATCTCGAGTTC--CTGCGGCCGGATCGTCGGTTCGTCGTCGAG 1203
Query 99692 CTTGGGGAAATCAGGCTCGCGGATCTCATCTGGCCACCGCAGCGTCTGCAACGTCAGAAC 99751
|||||| || | || |||| ||| || |||||| |||| ||||||| || || ||
Sbjct 1202 TGCGGGGAACTCGGCCTGCCGGACCTCGTCGGGCCACAGCAGTGTCTGCAGCGACATCAC 1143
Query 99752 CTCATTCTTGCCCGTCACACGCAACACCGCCAGGTGTTCCTTGCTCCGCAGGGTTACCCG 99811
| ||||| ||| |||| | ||||| || | | | ||||| || | |
Sbjct 1142 GT------TGCCCACCACCCGCAGTGCGGCCAGACGTGTCCGGTTGCGCAGCGTGAACGT 1089
Query 99812 TACGATGGCGACCTTGCCGGCGTCAGAGAGCGTCCTAGC-CAGCAGAGCGTAGGGCCGCA 99870
|||| || | | | ||| ||| | ||||| ||| | |||||| |||||| | |
Sbjct 1088 GGCGATCGCCAGCCGGTCGGTGTCGGCGAGCG-CCTGCCGCAGCAGCACGTAGGCCTTCG 1030
Query 99871 CCGAGCCCTCTACGT----TC-AGGTAGTAGGGCTTGTCGAGCATGATCGGGTCGACCTC 99925
|| | || ||| || ||||||||||||||||||| ||||||||||||||
Sbjct 1029 GTGA--CTTCGACGCCGGCTCGAGGTAGTAGGGCTTGTCGAAGTAGATCGGGTCGACCTG 972
Query 99926 CCCGGCCGGCACGAA 99940
| | |||||||||
Sbjct 971 GTCCGACGGCACGAA 957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 352501586624390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |