Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_023692.1 Length=48984 Score E Sequences producing significant alignments: (Bits) Value seq84561 159 1e-34 seq249899 123 8e-24 seq184310 86.0 2e-12 seq68307 84.2 7e-12 >seq84561 Length=1800 Score = 159 bits (176), Expect = 1e-34 Identities = 154/198 (78%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 46853 CCACCCCGCGACGCAGCACCTGCTCGATCTGTTCGCATACGAGCACCTCCCCGCTCATCT 46912 |||||||||||| |||||||||||||| ||||||| ||| ||| || |||| || || Sbjct 1591 CCACCCCGCGACACAGCACCTGCTCGACCTGTTCGATCACGGGCATCTGCCCGAGCACCT 1650 Query 46913 CCAAAAGGTGAGCAAGCCGATCGGCGATCTCGCTCACCAGATGGCCGACGAGCTCGGCGA 46972 || ||| ||||||||| |||| ||||| || |||||||||| ||| ||| Sbjct 1651 GCAGGTCGTGGCGAAGCCGATCCGCGACCTCGCCTACTCGATGGCCGACACCCTCAACGA 1710 Query 46973 CGGCGCCGAGAAAACGGTCGGACTGCGAAAGCTGCTCGAGGCCAAGGATTGCCTCGTGCG 47032 |||| ||||||| | ||| ||||| ||||||||||| |||||||| ||||| ||||| Sbjct 1711 CGGCCCCGAGAAGAGCACCGGGCTGCGCAAGCTGCTCGAAGCCAAGGACTGCCTGGTGCG 1770 Query 47033 ACAGGCTGTGATCGACCA 47050 ||||| || |||||||| Sbjct 1771 CCAGGCCGTCATCGACCA 1788 >seq249899 Length=916 Score = 123 bits (136), Expect = 8e-24 Identities = 89/103 (86%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 3044 CCTCAACCTCGACGGCAAGGGCGGCAGCTACGCGCTCGCCAGCGTGCAGGCCGACACGTT 3103 ||||||||||||||||||||||||||| ||||| || |||||||||||| |||| ||||| Sbjct 111 CCTCAACCTCGACGGCAAGGGCGGCAGTTACGCCCTGGCCAGCGTGCAGTCCGATACGTT 52 Query 3104 CGTGCAGTCGGTGCAGACGGTCGCCGACGAGCACCGCGACATC 3146 ||||||||| | |||||| | |||||| | || |||||||| Sbjct 51 CGTGCAGTCCGAGCAGACCGAGGCCGACTACCAGTGCGACATC 9 >seq184310 Length=1059 Score = 86.0 bits (94), Expect = 2e-12 Identities = 192/276 (70%), Gaps = 27/276 (10%) Strand=Plus/Plus Query 2232 CGGATGTGCCGCGAAGAGGCGCGAATCGCGTCGGTGCTGCGGGCGGTCGCGTTGCCGATT 2291 |||||| ||||| || || | || | ||||| ||| ||||| | ||||||| Sbjct 52 CGGATGGAACGCGAGGACGCCCAGGTCACCTCGGTCCTGACCGCGGTGCAGCTGCCGATC 111 Query 2292 CGCCGGACCGACTGGCGGATCCGTC-CG-AACGGCGCCCGCGACATGGTGGTCGAGCACG 2349 || || ||| | |||||| | ||| || |||||||| ||| ||| |||| || || Sbjct 112 CGGCGCACCCAGTGGCGGGT--GTCGCGCAACGGCGCTCGCCCGGAGGTCGTCGCGCTCG 169 Query 2350 TCGCGGCGTGC-CTCGGTCTGCCGATCGAGGGCGACGACACGAATCA-GCCGA--CGCCG 2405 ||||| |||| || |||||||||||||||||| | || | | ||||| ||||| Sbjct 170 TCGCG-CGTGATCTGAATCTGCCGATCGAGGGCGAGTCCGCGGAGGAGGCCGACGCGCCG 228 Query 2406 CGC------ACCCGGGGCCGGTTCTCGTGGGACCAGCATTTGCGCCTGGCGC--TCAA-G 2456 ||| ||||| ||||| |||||||||| | || || ||| | || ||| | Sbjct 229 CGCGGCCGGACCCGTGGCCGATTCTCGTGGG--CCGC----GCACCTCGAGCAGGCAATG 282 Query 2457 TCGCTG---CAGTTCGGTCACGCAGTGTTCGAGCAG 2489 ||| || |||||||| ||||| | ||||||||| Sbjct 283 TCGATGTTCCAGTTCGGCCACGCGTTCTTCGAGCAG 318 >seq68307 Length=2902 Score = 84.2 bits (92), Expect = 7e-12 Identities = 130/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 36889 GGCGATCGAGCTCGTCGTGACAACACAGTTCGCCTCGGGCACGATGCTGCAACGCAAGCT 36948 ||| |||||| | ||||| | | ||||||| ||| | ||||||| || |||||||| Sbjct 1561 GGCCATCGAGTTGGTCGTCAGCAGCCAGTTCGGGTCGACCTCGATGCTCCAGCGCAAGCT 1502 Query 36949 CAACGTCGGGTTCGCCCGGTCGCAACGCCTGCTCGACGAGATGGAGCAACTCGGCATCGT 37008 ||||||||||||| | | || ||| | ||| ||||||| | ||| |||| Sbjct 1501 GCGCGTCGGGTTCGCCAAGGCTGGTCGACTGATGGACCTGATGGAGACCCGCGGGGTCGT 1442 Query 37009 CGG--CGAGGCTGAGGGCAGCAAGGCGCGCCCGGTCTACTTCAAGGCCGACGACCTCGCC 37066 ||| |||| ||||| ||||||||| ||| ||||| |||| ||||||||| Sbjct 1441 CGGACCGAGC--GAGGGATCCAAGGCGCGTGACGTCCTGGTCAAGCCCGAAGACCTCGCC 1384 Query 37067 GGGG 37070 |||| Sbjct 1383 GGGG 1380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156111840028316