Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_023692.1
Length=48984
Score E
Sequences producing significant alignments: (Bits) Value
seq84561 159 1e-34
seq249899 123 8e-24
seq184310 86.0 2e-12
seq68307 84.2 7e-12
>seq84561
Length=1800
Score = 159 bits (176), Expect = 1e-34
Identities = 154/198 (78%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 46853 CCACCCCGCGACGCAGCACCTGCTCGATCTGTTCGCATACGAGCACCTCCCCGCTCATCT 46912
|||||||||||| |||||||||||||| ||||||| ||| ||| || |||| || ||
Sbjct 1591 CCACCCCGCGACACAGCACCTGCTCGACCTGTTCGATCACGGGCATCTGCCCGAGCACCT 1650
Query 46913 CCAAAAGGTGAGCAAGCCGATCGGCGATCTCGCTCACCAGATGGCCGACGAGCTCGGCGA 46972
|| ||| ||||||||| |||| ||||| || |||||||||| ||| |||
Sbjct 1651 GCAGGTCGTGGCGAAGCCGATCCGCGACCTCGCCTACTCGATGGCCGACACCCTCAACGA 1710
Query 46973 CGGCGCCGAGAAAACGGTCGGACTGCGAAAGCTGCTCGAGGCCAAGGATTGCCTCGTGCG 47032
|||| ||||||| | ||| ||||| ||||||||||| |||||||| ||||| |||||
Sbjct 1711 CGGCCCCGAGAAGAGCACCGGGCTGCGCAAGCTGCTCGAAGCCAAGGACTGCCTGGTGCG 1770
Query 47033 ACAGGCTGTGATCGACCA 47050
||||| || ||||||||
Sbjct 1771 CCAGGCCGTCATCGACCA 1788
>seq249899
Length=916
Score = 123 bits (136), Expect = 8e-24
Identities = 89/103 (86%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 3044 CCTCAACCTCGACGGCAAGGGCGGCAGCTACGCGCTCGCCAGCGTGCAGGCCGACACGTT 3103
||||||||||||||||||||||||||| ||||| || |||||||||||| |||| |||||
Sbjct 111 CCTCAACCTCGACGGCAAGGGCGGCAGTTACGCCCTGGCCAGCGTGCAGTCCGATACGTT 52
Query 3104 CGTGCAGTCGGTGCAGACGGTCGCCGACGAGCACCGCGACATC 3146
||||||||| | |||||| | |||||| | || ||||||||
Sbjct 51 CGTGCAGTCCGAGCAGACCGAGGCCGACTACCAGTGCGACATC 9
>seq184310
Length=1059
Score = 86.0 bits (94), Expect = 2e-12
Identities = 192/276 (70%), Gaps = 27/276 (10%)
Strand=Plus/Plus
Query 2232 CGGATGTGCCGCGAAGAGGCGCGAATCGCGTCGGTGCTGCGGGCGGTCGCGTTGCCGATT 2291
|||||| ||||| || || | || | ||||| ||| ||||| | |||||||
Sbjct 52 CGGATGGAACGCGAGGACGCCCAGGTCACCTCGGTCCTGACCGCGGTGCAGCTGCCGATC 111
Query 2292 CGCCGGACCGACTGGCGGATCCGTC-CG-AACGGCGCCCGCGACATGGTGGTCGAGCACG 2349
|| || ||| | |||||| | ||| || |||||||| ||| ||| |||| || ||
Sbjct 112 CGGCGCACCCAGTGGCGGGT--GTCGCGCAACGGCGCTCGCCCGGAGGTCGTCGCGCTCG 169
Query 2350 TCGCGGCGTGC-CTCGGTCTGCCGATCGAGGGCGACGACACGAATCA-GCCGA--CGCCG 2405
||||| |||| || |||||||||||||||||| | || | | ||||| |||||
Sbjct 170 TCGCG-CGTGATCTGAATCTGCCGATCGAGGGCGAGTCCGCGGAGGAGGCCGACGCGCCG 228
Query 2406 CGC------ACCCGGGGCCGGTTCTCGTGGGACCAGCATTTGCGCCTGGCGC--TCAA-G 2456
||| ||||| ||||| |||||||||| | || || ||| | || ||| |
Sbjct 229 CGCGGCCGGACCCGTGGCCGATTCTCGTGGG--CCGC----GCACCTCGAGCAGGCAATG 282
Query 2457 TCGCTG---CAGTTCGGTCACGCAGTGTTCGAGCAG 2489
||| || |||||||| ||||| | |||||||||
Sbjct 283 TCGATGTTCCAGTTCGGCCACGCGTTCTTCGAGCAG 318
>seq68307
Length=2902
Score = 84.2 bits (92), Expect = 7e-12
Identities = 130/184 (71%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 36889 GGCGATCGAGCTCGTCGTGACAACACAGTTCGCCTCGGGCACGATGCTGCAACGCAAGCT 36948
||| |||||| | ||||| | | ||||||| ||| | ||||||| || ||||||||
Sbjct 1561 GGCCATCGAGTTGGTCGTCAGCAGCCAGTTCGGGTCGACCTCGATGCTCCAGCGCAAGCT 1502
Query 36949 CAACGTCGGGTTCGCCCGGTCGCAACGCCTGCTCGACGAGATGGAGCAACTCGGCATCGT 37008
||||||||||||| | | || ||| | ||| ||||||| | ||| ||||
Sbjct 1501 GCGCGTCGGGTTCGCCAAGGCTGGTCGACTGATGGACCTGATGGAGACCCGCGGGGTCGT 1442
Query 37009 CGG--CGAGGCTGAGGGCAGCAAGGCGCGCCCGGTCTACTTCAAGGCCGACGACCTCGCC 37066
||| |||| ||||| ||||||||| ||| ||||| |||| |||||||||
Sbjct 1441 CGGACCGAGC--GAGGGATCCAAGGCGCGTGACGTCCTGGTCAAGCCCGAAGACCTCGCC 1384
Query 37067 GGGG 37070
||||
Sbjct 1383 GGGG 1380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156111840028316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |