Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26]
277,083 sequences; 279,264,790 total letters
Query= NC_023697.1
Length=48420
Score E
Sequences producing significant alignments: (Bits) Value
seq232712 174 5e-39
seq84156 105 2e-18
seq180633 104 7e-18
seq148523 93.3 1e-14
>seq232712
Length=770
Score = 174 bits (192), Expect = 5e-39
Identities = 164/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 37010 CATCAACCAGCTGCGGCCGGGCGTCGTGGTGATCGAGAACGTAAGGGGATTGCTCAGTGC 37069
||||| ||| || || ||| || |||||| ||||| || || ||||| ||||||||||
Sbjct 215 CATCACCCACCTCCGACCGCGCTACGTGGTCATCGAAAATGTCAGGGGGCTGCTCAGTGC 156
Query 37070 AAGGGCCTATCGCGCAATGGAATCCGAAGAGGCAGCTGTGGGAGACGGGGCAGATGGACC 37129
| ||| ||||| || |||||||||| | | | |||||||| | | ||||
Sbjct 155 CCGAGCCCATCGCCCAGTGGAATCCGAGTCGAATGGTCTGGGAGACCACGACTCTCGACC 96
Query 37130 TGTTCTCCGGGCACTCGGTGCCGTACTCGGAGACCTTGCCGACCTCGGGTATGACGCGCA 37189
||||||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||
Sbjct 95 TGTTCTCCGAGCACTCGGAGCCGTACTCGGAGACCTTTCCGACATCGGGTATGACGCGCA 36
Query 37190 GTGGACGACTGTTGCCGCTTCCGCAGTCG 37218
|||| |||||| |||| ||||| ||||
Sbjct 35 GTGGGTCACTGTTCCCGCCTCCGCCGTCG 7
>seq84156
Length=432
Score = 105 bits (116), Expect = 2e-18
Identities = 103/132 (78%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 13720 CTGGAACGCGATTGCGCAGGGCGAATCAGGCGGCAACTGGCACATCAACACCGGCAACGG 13779
|||| | || | || ||| |||| || | |||||||||||||||||||||||||||
Sbjct 300 CTGGGATGCCGTCGCCCAGTGCGAGTCGACCAACAACTGGCACATCAACACCGGCAACGG 359
Query 13780 CTACTACGGCGGTCTGCAGTTCAAGCAGTCGAGCTGGGAGGCTGCGGGCGGCACCAACTA 13839
|||||||||||| ||||||||| |||||| | ||||||||| |||||| | ||
Sbjct 360 CTACTACGGCGGACTGCAGTTCTCGCAGTCCACCTGGGAGGCCTTCGGCGGCGGGCAGTA 419
Query 13840 CGC--GCCGCGC 13849
||| |||||||
Sbjct 420 CGCCAGCCGCGC 431
>seq180633
Length=2589
Score = 104 bits (114), Expect = 7e-18
Identities = 141/194 (73%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 13735 GCAGGGCGAATCAGGCGGCAACTGGCACATCAACACCGGCAACGGCTACTACGGCGGTCT 13794
|||| |||| || |||||||||| |||||||||||||||||| | || |||||| |
Sbjct 880 GCAGTGCGAGTCGACCGGCAACTGGGCCATCAACACCGGCAACGGGTTCTTCGGCGGCGT 821
Query 13795 GCAGTTCAAGCAGTCGAGCTGGGAG-GCTGCGGGCGGCACCAACTACGCGCCGCGCGCCG 13853
||||||| | ||| | |||||| |||| ||| ||| | |||||||||||||| |
Sbjct 820 GCAGTTCGACCAGAACACCTGGGACCGCTG-GGGTGGCCAGGAGTACGCGCCGCGCGCGG 762
Query 13854 ACCTCGCCACGCCGTACCAGCAGGCCCTGGTCGCCGAGAACCTGCTCGCGCAGCAGGGCC 13913
| |||||| | | | ||||| | | |||||||||| ||||| ||||||
Sbjct 761 ATCTCGCCTCCCGCGAGGAGCAGATCGCGATCGCCGAGAAGACCCTCGCCGCGCAGGGGT 702
Query 13914 CCGGCGCGTGGCCG 13927
||||| ||||||
Sbjct 701 GGGGCGCCTGGCCG 688
>seq148523
Length=1916
Score = 93.3 bits (102), Expect = 1e-14
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 38340 CCAGCGCCGTCGCCGACCGAGCCGAACAAGAACGGCAATCCCCGGCTGGCCGCAGCGTTC 38399
|| ||||| | |||||||| ||||||| || ||||| ||||||||| |||| ||||
Sbjct 544 CCTGCGCCCGCACCGACCGAACCGAACACCAAGGGCAACCCCCGGCTGTCCGCGCTGTTC 603
Query 38400 CCGGAATGGATGATGGGCTGGCCCGCGGGCTGGGTCACCGA 38440
||||||||||||||| | | ||| ||||||||||||||
Sbjct 604 CCGGAATGGATGATGTTCCTCCGCGCCGGCTGGGTCACCGA 644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 154312978471172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |