Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_023697.1 Length=48420 Score E Sequences producing significant alignments: (Bits) Value seq232712 174 5e-39 seq84156 105 2e-18 seq180633 104 7e-18 seq148523 93.3 1e-14 >seq232712 Length=770 Score = 174 bits (192), Expect = 5e-39 Identities = 164/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 37010 CATCAACCAGCTGCGGCCGGGCGTCGTGGTGATCGAGAACGTAAGGGGATTGCTCAGTGC 37069 ||||| ||| || || ||| || |||||| ||||| || || ||||| |||||||||| Sbjct 215 CATCACCCACCTCCGACCGCGCTACGTGGTCATCGAAAATGTCAGGGGGCTGCTCAGTGC 156 Query 37070 AAGGGCCTATCGCGCAATGGAATCCGAAGAGGCAGCTGTGGGAGACGGGGCAGATGGACC 37129 | ||| ||||| || |||||||||| | | | |||||||| | | |||| Sbjct 155 CCGAGCCCATCGCCCAGTGGAATCCGAGTCGAATGGTCTGGGAGACCACGACTCTCGACC 96 Query 37130 TGTTCTCCGGGCACTCGGTGCCGTACTCGGAGACCTTGCCGACCTCGGGTATGACGCGCA 37189 ||||||||| |||||||| |||||||||||||||||| ||||| |||||||||||||||| Sbjct 95 TGTTCTCCGAGCACTCGGAGCCGTACTCGGAGACCTTTCCGACATCGGGTATGACGCGCA 36 Query 37190 GTGGACGACTGTTGCCGCTTCCGCAGTCG 37218 |||| |||||| |||| ||||| |||| Sbjct 35 GTGGGTCACTGTTCCCGCCTCCGCCGTCG 7 >seq84156 Length=432 Score = 105 bits (116), Expect = 2e-18 Identities = 103/132 (78%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 13720 CTGGAACGCGATTGCGCAGGGCGAATCAGGCGGCAACTGGCACATCAACACCGGCAACGG 13779 |||| | || | || ||| |||| || | ||||||||||||||||||||||||||| Sbjct 300 CTGGGATGCCGTCGCCCAGTGCGAGTCGACCAACAACTGGCACATCAACACCGGCAACGG 359 Query 13780 CTACTACGGCGGTCTGCAGTTCAAGCAGTCGAGCTGGGAGGCTGCGGGCGGCACCAACTA 13839 |||||||||||| ||||||||| |||||| | ||||||||| |||||| | || Sbjct 360 CTACTACGGCGGACTGCAGTTCTCGCAGTCCACCTGGGAGGCCTTCGGCGGCGGGCAGTA 419 Query 13840 CGC--GCCGCGC 13849 ||| ||||||| Sbjct 420 CGCCAGCCGCGC 431 >seq180633 Length=2589 Score = 104 bits (114), Expect = 7e-18 Identities = 141/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 13735 GCAGGGCGAATCAGGCGGCAACTGGCACATCAACACCGGCAACGGCTACTACGGCGGTCT 13794 |||| |||| || |||||||||| |||||||||||||||||| | || |||||| | Sbjct 880 GCAGTGCGAGTCGACCGGCAACTGGGCCATCAACACCGGCAACGGGTTCTTCGGCGGCGT 821 Query 13795 GCAGTTCAAGCAGTCGAGCTGGGAG-GCTGCGGGCGGCACCAACTACGCGCCGCGCGCCG 13853 ||||||| | ||| | |||||| |||| ||| ||| | |||||||||||||| | Sbjct 820 GCAGTTCGACCAGAACACCTGGGACCGCTG-GGGTGGCCAGGAGTACGCGCCGCGCGCGG 762 Query 13854 ACCTCGCCACGCCGTACCAGCAGGCCCTGGTCGCCGAGAACCTGCTCGCGCAGCAGGGCC 13913 | |||||| | | | ||||| | | |||||||||| ||||| |||||| Sbjct 761 ATCTCGCCTCCCGCGAGGAGCAGATCGCGATCGCCGAGAAGACCCTCGCCGCGCAGGGGT 702 Query 13914 CCGGCGCGTGGCCG 13927 ||||| |||||| Sbjct 701 GGGGCGCCTGGCCG 688 >seq148523 Length=1916 Score = 93.3 bits (102), Expect = 1e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 38340 CCAGCGCCGTCGCCGACCGAGCCGAACAAGAACGGCAATCCCCGGCTGGCCGCAGCGTTC 38399 || ||||| | |||||||| ||||||| || ||||| ||||||||| |||| |||| Sbjct 544 CCTGCGCCCGCACCGACCGAACCGAACACCAAGGGCAACCCCCGGCTGTCCGCGCTGTTC 603 Query 38400 CCGGAATGGATGATGGGCTGGCCCGCGGGCTGGGTCACCGA 38440 ||||||||||||||| | | ||| |||||||||||||| Sbjct 604 CCGGAATGGATGATGTTCCTCCGCGCCGGCTGGGTCACCGA 644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154312978471172