Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pachinus_20[genbank_20GCA_5F900068735.1_202017-04-26] 277,083 sequences; 279,264,790 total letters Query= NC_023703.1 Length=64613 Score E Sequences producing significant alignments: (Bits) Value seq219746 307 4e-79 seq275020 95.1 5e-15 >seq219746 Length=1062 Score = 307 bits (340), Expect = 4e-79 Identities = 563/833 (68%), Gaps = 35/833 (4%) Strand=Plus/Plus Query 54437 CCCGGAGTGCACGAATCACTCGGTGGCCAAGGGCCGCAAGCGCGTCGACTCGCAGCCCGA 54496 |||| |||||| |||||||||| ||| ||||| |||||||| |||| || ||||| Sbjct 18 CCCGTCGTGCACCCATCACTCGGTCGCCCAGGGCATCAAGCGCGCCGACAAGCGCCCCGA 77 Query 54497 TCTGTTCGGGGAGGTGCTGCCCGACGCGGCGGCCGAGCGGTCCCGTGCCACGATGTGGGA 54556 | |||||||||| ||||||||| || ||||| || || || || ||||||||||| Sbjct 78 CCCCAACGGGGAGGTGTTGCCCGACGACGCCGCCGAACGCTCGCGGGCGACGATGTGGGA 137 Query 54557 CGTGCCCCGGTTCGCCGAGGCGCACCACTACCAGGCCGTCATCGTCGAGAACGTCGTGGA 54616 ||| ||||||||||||| ||||| |||| | || ||||||| ||||| || || Sbjct 138 CGTCGTCCGGTTCGCCGAGTACCACCAGTACCGATCAATCGTCGTCGAAAACGTTGTCGA 197 Query 54617 CGCGTGGCACTGGCAGCCGTTCCAGGCGTGGCTGATGGCGATGGACTCGCTGGGCTACGA 54676 || || ||||| | |||| | ||||||| |||| |||| | ||||||||| | Sbjct 198 CGTGTATTTCTGGCCGTTGTTCGCGCCGTGGCTCGCCGCGACGGACGCCCTGGGCTACAA 257 Query 54677 GCACCACATCGTGTTCCTGAACTCGATGCACGCGCAGGCGTTCGGGCTGGGGGCGCCGCA 54736 ||| | ||||||| || |||||||||||||||||| |||||| | | ||| || || Sbjct 258 CCACGAGATCGTGTGGCTCAACTCGATGCACGCGCAGCTGTTCGGTCAGCCGGCCCCTCA 317 Query 54737 GTCACGGGACCGCATGTACGTGGTGTTCTGGCGCAAGGACAACCCGCGCCCCGACCTCGA 54796 ||| ||||| | || || || || Sbjct 318 ATCAAGGGACAGGATCTATGTCGT---------------------NNNNNNNNNNNNNNN 356 Query 54797 CCGGGTCACCCGGCCGCCGGCGGTCTGCCCGACGTGCGGGCCCGTGCGCGCCATGCAGGT 54856 || ||| || |||||| |||| || || || | | || || Sbjct 357 NNNNNNNNNNNNNNCGTGGGCTGTGTGCCCGTCGTGTGGCCCTGTCCAGTCGGTGAAGAC 416 Query 54857 GTGGAAGCGGGCCGATCGCGCGCCGTGGGGACGGTACCGCGCCCAGTATGTGTACCGCTG 54916 |||||||| | || || | |||||| || |||||||||||||| || | ||| Sbjct 417 CTGGAAGCGCCCGGAGCG---TCAGTGGGGCCGCTACCGCGCCCAGTACACGTTCTCCTG 473 Query 54917 CCCG-TCGG-TGAAGTGCCGCAACCAGATCCTCGAACCATCGTTCCGGCCGGCGGCCGAA 54974 |||| ||| | | | || || | ||| | ||||| | || || || || || Sbjct 474 CCCGAACGGCTCATGCGCGGCCA-CAG----TGGAACCCGACTGGCGACCCGCCGCAGAC 528 Query 54975 ATTATCGACTGGTCGCACCTTGGCCAGCGCATCGGCGACCGGGCCAA--GCCGCTGGCCG 55032 || ||||||||||||| | ||| |||||||| |||| || || |||||||||| Sbjct 529 ATCATCGACTGGTCGCTGCCCGGCACCCGCATCGGTGACC--GCAAACGCCCGCTGGCCG 586 Query 55033 CCAAGACGTTGGCCCGCATCGAGGCGGGGATTCAGCGGTACTGGGCACCGTTCATCACCG 55092 ||||| || |||| ||| |||| ||||| | || ||||||| ||||||| |||||| Sbjct 587 AGAAGACCATGACCCGTATCCAGGCCGGGATCGACCGCTACTGGGGACCGTTCCTCACCG 646 Query 55093 AGCACCGCCACGAGTATCGAGTTCGCGGTGTCGATGTGCCGCTGCAGACGGTGGCCGCCG 55152 |||||||||||||||| || || |||| || |||| ||||||| ||||||||| Sbjct 647 AGCACCGCCACGAGTACCGCGTCCGCGACATCACCCGGCCGATGCAGACCGTGGCCGCCT 706 Query 55153 CGGGCAATCACTTCGGTCTGGCAGTGCCCGTGGAGGGGCGTGACGGTAAGCAGGCTGCGC 55212 | ||||| |||||||| || || | ||||| |||||||| || || || ||| || Sbjct 707 CAGGCAACCACTTCGGCCTCGCCATCCCCGTCGAGGGGCGCGAGGGCAAAGCGGCCCTGC 766 Query 55213 CGGTAGATCAACCGACCCGAACGATGACGACCCGCAACGAGACCGGGCTGGCG 55265 | | |||| || || ||||| |||||||| ||||||| |||||| Sbjct 767 CAATCTCGGCACCGGTACGCACCATGACCACCCGCAATGAGACCGCCCTGGCG 819 >seq275020 Length=439 Score = 95.1 bits (104), Expect = 5e-15 Identities = 135/189 (71%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 44339 TCGCAGCGCGACCTAGGTCATCTTGTGCGCCGGACTCAGACCACGATCCATAAAATCGAA 44398 |||||||| ||||| | ||| |||||||| || |||||||||||| | || || Sbjct 8 TCGCAGCGTGACCTTGCGTTTCTGGTGCGCCGCACGCAGACCACGATCTACGCGATTGAG 67 Query 44399 ACCGGTCAGCTCAAGAACATCTCCGAAGACCTCGCGTTGGCGCTAGCAGGCAGGCTCGAT 44458 |||| |||| | | | || |||| || |||||||||||| | || | | | ||||| Sbjct 68 GCCGGCAAGCTGACCACCCTCACCGAGGATCTCGCGTTGGCGATCGCGGCCCGTCTCGAC 127 Query 44459 CGGCATTGGGAGGACCTCTTCGTCGCCCATGATGATGTGTCCACGCCTTCGGCGTCAGCT 44518 | ||||||||||| |||| |||||| || | || |||| ||| | | |||| || Sbjct 128 GTCCCGTGGGAGGACCTGTTCGACGCCCACGACGCCGTTTCCATGCCCGCAGTGTCAACT 187 Query 44519 GTCTGCGCA 44527 | |||| || Sbjct 188 G-CTGCACA 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 205938998051962